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Uncovering the overlapping community structure of complex networks in nature and society

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  1. Zhou, Xu & Liu, Yanheng & Zhang, Jindong & Liu, Tuming & Zhang, Di, 2015. "An ant colony based algorithm for overlapping community detection in complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 427(C), pages 289-301.
  2. Mattia G. Bergomi & Massimo Ferri & Pietro Vertechi & Lorenzo Zuffi, 2021. "Beyond Topological Persistence: Starting from Networks," Mathematics, MDPI, vol. 9(23), pages 1-15, November.
  3. Hadi Vafaii & Francesca Mandino & Gabriel Desrosiers-Grégoire & David O’Connor & Marija Markicevic & Xilin Shen & Xinxin Ge & Peter Herman & Fahmeed Hyder & Xenophon Papademetris & Mallar Chakravarty , 2024. "Multimodal measures of spontaneous brain activity reveal both common and divergent patterns of cortical functional organization," Nature Communications, Nature, vol. 15(1), pages 1-19, December.
  4. Assaf Almog & M Renate Buijink & Ori Roethler & Stephan Michel & Johanna H Meijer & Jos H T Rohling & Diego Garlaschelli, 2019. "Uncovering functional signature in neural systems via random matrix theory," PLOS Computational Biology, Public Library of Science, vol. 15(5), pages 1-20, May.
  5. Eustace, Justine & Wang, Xingyuan & Cui, Yaozu, 2015. "Community detection using local neighborhood in complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 436(C), pages 665-677.
  6. Shen, Huawei & Cheng, Xueqi & Cai, Kai & Hu, Mao-Bin, 2009. "Detect overlapping and hierarchical community structure in networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 388(8), pages 1706-1712.
  7. Shang, Ronghua & Bai, Jing & Jiao, Licheng & Jin, Chao, 2013. "Community detection based on modularity and an improved genetic algorithm," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 392(5), pages 1215-1231.
  8. He, Jialin & Chen, Duanbing & Sun, Chongjing & Fu, Yan & Li, Wenjun, 2017. "Efficient stepwise detection of communities in temporal networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 469(C), pages 438-446.
  9. Jianlin Zhou & An Zeng & Ying Fan & Zengru Di, 2018. "Identifying important scholars via directed scientific collaboration networks," Scientometrics, Springer;Akadémiai Kiadó, vol. 114(3), pages 1327-1343, March.
  10. Abbasiharofteh, Milad & Kogler, Dieter F. & Lengyel, Balázs, 2023. "Atypical combinations of technologies in regional co-inventor networks," Research Policy, Elsevier, vol. 52(10).
  11. Wu, Tao & Guo, Yuxiao & Chen, Leiting & Liu, Yanbing, 2016. "Integrated structure investigation in complex networks by label propagation," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 448(C), pages 68-80.
  12. Zhou, Xu & Liu, Yanheng & Wang, Jian & Li, Chun, 2017. "A density based link clustering algorithm for overlapping community detection in networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 486(C), pages 65-78.
  13. Yang, Xu-Hua & Chen, Guang & Sun, Bao & Chen, Sheng-Yong & Wang, Wan-Liang, 2011. "Bus transport network model with ideal n-depth clique network topology," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 390(23), pages 4660-4672.
  14. Ma, Xiaoke & Gao, Lin & Yong, Xuerong & Fu, Lidong, 2010. "Semi-supervised clustering algorithm for community structure detection in complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(1), pages 187-197.
  15. Beiró, Mariano G. & Busch, Jorge R. & Grynberg, Sebastian P. & Alvarez-Hamelin, J. Ignacio, 2013. "Obtaining communities with a fitness growth process," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 392(9), pages 2278-2293.
  16. Ding, Jie & Wen, Changyun & Li, Guoqi, 2017. "Key node selection in minimum-cost control of complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 486(C), pages 251-261.
  17. Kibae Kim & Jörn Altmann & Sodam Baek, 2015. "Role of Platform Providers in Software Ecosystems," TEMEP Discussion Papers 2015120, Seoul National University; Technology Management, Economics, and Policy Program (TEMEP), revised Jan 2015.
  18. Benati, Stefano & Puerto, Justo & Rodríguez-Chía, Antonio M. & Temprano, Francisco, 2022. "A mathematical programming approach to overlapping community detection," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 602(C).
  19. Ren, Fu-Xin & Shen, Hua-Wei & Cheng, Xue-Qi, 2012. "Modeling the clustering in citation networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 391(12), pages 3533-3539.
  20. Franke, R., 2016. "CHIMERA: Top-down model for hierarchical, overlapping and directed cluster structures in directed and weighted complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 461(C), pages 384-408.
  21. Sun, Peng Gang, 2016. "Imbalance problem in community detection," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 457(C), pages 364-376.
  22. Stefan Pinkert & Jörg Schultz & Jörg Reichardt, 2010. "Protein Interaction Networks—More Than Mere Modules," PLOS Computational Biology, Public Library of Science, vol. 6(1), pages 1-13, January.
  23. Weibo Li & Wei Liu & Lei Wu & Xue Guo, 2021. "Risk spillover networks in financial system based on information theory," PLOS ONE, Public Library of Science, vol. 16(6), pages 1-20, June.
  24. Deijfen, M. & Kets, W., 2007. "Random Intersection Graphs with Tunable Degree Distribution and Clustering," Other publications TiSEM eddee3bd-5845-4b18-8734-b, Tilburg University, School of Economics and Management.
  25. J Matthew Mahoney & Jaclyn Taroni & Viktor Martyanov & Tammara A Wood & Casey S Greene & Patricia A Pioli & Monique E Hinchcliff & Michael L Whitfield, 2015. "Systems Level Analysis of Systemic Sclerosis Shows a Network of Immune and Profibrotic Pathways Connected with Genetic Polymorphisms," PLOS Computational Biology, Public Library of Science, vol. 11(1), pages 1-20, January.
  26. Wu, Zhihao & Lin, Youfang & Wan, Huaiyu & Tian, Shengfeng & Hu, Keyun, 2012. "Efficient overlapping community detection in huge real-world networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 391(7), pages 2475-2490.
  27. Jung, Sukhwan & Segev, Aviv, 2022. "DAC: Descendant-aware clustering algorithm for network-based topic emergence prediction," Journal of Informetrics, Elsevier, vol. 16(3).
  28. Chen, Xianhuan & Xia, Chengyi & Wang, Jin, 2018. "A novel trust-based community detection algorithm used in social networks," Chaos, Solitons & Fractals, Elsevier, vol. 108(C), pages 57-65.
  29. Yuan, Peiyan & Tang, Shaojie, 2015. "Community-based immunization in opportunistic social networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 420(C), pages 85-97.
  30. Li, Wenyuan & Lin, Yongjing & Liu, Ying, 2007. "The structure of weighted small-world networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 376(C), pages 708-718.
  31. Daniel Straulino & Mattie Landman & Neave O'Clery, 2020. "A bi-directional approach to comparing the modular structure of networks," Papers 2010.06568, arXiv.org.
  32. Akshat Singhal & Song Cao & Christopher Churas & Dexter Pratt & Santo Fortunato & Fan Zheng & Trey Ideker, 2020. "Multiscale community detection in Cytoscape," PLOS Computational Biology, Public Library of Science, vol. 16(10), pages 1-10, October.
  33. Shang, Jiaxing & Liu, Lianchen & Li, Xin & Xie, Feng & Wu, Cheng, 2015. "Epidemic spreading on complex networks with overlapping and non-overlapping community structure," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 419(C), pages 171-182.
  34. Zhang, JingJing & Yan, Yan & Guan, JianCheng, 2019. "Recombinant distance, network governance and recombinant innovation," Technological Forecasting and Social Change, Elsevier, vol. 143(C), pages 260-272.
  35. Guo, Wei-Feng & Zhang, Shao-Wu, 2016. "A general method of community detection by identifying community centers with affinity propagation," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 447(C), pages 508-519.
  36. Gholami, Maryam & Sheikhahmadi, Amir & Khamforoosh, Keyhan & Jalili, Mahdi, 2022. "Overlapping community detection in networks based on Neutrosophic theory," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 598(C).
  37. Ni, Shunjiang & Weng, Wenguo & Zhang, Hui, 2011. "Modeling the effects of social impact on epidemic spreading in complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 390(23), pages 4528-4534.
  38. Atieh Mirshahvalad & Johan Lindholm & Mattias Derlén & Martin Rosvall, 2012. "Significant Communities in Large Sparse Networks," PLOS ONE, Public Library of Science, vol. 7(3), pages 1-7, March.
  39. Xiao‐Bing Hu & Hang Li & XiaoMei Guo & Pieter H. A. J. M. van Gelder & Peijun Shi, 2019. "Spatial Vulnerability of Network Systems under Spatially Local Hazards," Risk Analysis, John Wiley & Sons, vol. 39(1), pages 162-179, January.
  40. Lou, Hao & Li, Shenghong & Zhao, Yuxin, 2013. "Detecting community structure using label propagation with weighted coherent neighborhood propinquity," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 392(14), pages 3095-3105.
  41. Pang, Shaopeng & Hao, Fei, 2017. "Optimizing controllability of edge dynamics in complex networks by perturbing network structure," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 470(C), pages 217-227.
  42. Qing-Ju Jiao & Yan-Kai Zhang & Lu-Ning Li & Hong-Bin Shen, 2011. "BinTree Seeking: A Novel Approach to Mine Both Bi-Sparse and Cohesive Modules in Protein Interaction Networks," PLOS ONE, Public Library of Science, vol. 6(11), pages 1-12, November.
  43. Naoki Masuda & Issei Kurahashi & Hiroko Onari, 2013. "Suicide Ideation of Individuals in Online Social Networks," PLOS ONE, Public Library of Science, vol. 8(4), pages 1-8, April.
  44. Yanjie Xu & Tao Ren & Shixiang Sun, 2022. "Community Detection Based on Node Influence and Similarity of Nodes," Mathematics, MDPI, vol. 10(6), pages 1-15, March.
  45. Martin Rosvall & Carl T Bergstrom, 2010. "Mapping Change in Large Networks," PLOS ONE, Public Library of Science, vol. 5(1), pages 1-7, January.
  46. Lan Huang & Guishen Wang & Yan Wang & Enrico Blanzieri & Chao Su, 2013. "Link Clustering with Extended Link Similarity and EQ Evaluation Division," PLOS ONE, Public Library of Science, vol. 8(6), pages 1-18, June.
  47. Weijiang Li & Hiroyuki Kurata, 2008. "Visualizing Global Properties of Large Complex Networks," PLOS ONE, Public Library of Science, vol. 3(7), pages 1-4, July.
  48. Gui, Chun & Zhang, Ruisheng & Hu, Rongjing & Huang, Guoming & Wei, Jiaxuan, 2018. "Overlapping communities detection based on spectral analysis of line graphs," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 498(C), pages 50-65.
  49. Carusi, Chiara & Bianchi, Giuseppe, 2019. "Scientific community detection via bipartite scholar/journal graph co-clustering," Journal of Informetrics, Elsevier, vol. 13(1), pages 354-386.
  50. Wu, Jianshe & Wang, Xiaohua & Jiao, Licheng, 2012. "Synchronization on overlapping community network," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 391(3), pages 508-514.
  51. JinHyo Joseph Yun & EuiSeob Jeong & JinSeu Park, 2016. "Network Analysis of Open Innovation," Sustainability, MDPI, vol. 8(8), pages 1-21, July.
  52. Chen, Peng & Qi, Mingze & Yan, Liang & Duan, Xiaojun, 2024. "Diffusion capacity analysis of complex network based on the cluster distribution," Chaos, Solitons & Fractals, Elsevier, vol. 178(C).
  53. Kets, W., 2008. "Networks and learning in game theory," Other publications TiSEM 7713fce1-3131-498c-8c6f-3, Tilburg University, School of Economics and Management.
  54. Chungmok Lee & Minh Pham & Myong K. Jeong & Dohyun Kim & Dennis K. J. Lin & Wanpracha Art Chavalitwongse, 2015. "A Network Structural Approach to the Link Prediction Problem," INFORMS Journal on Computing, INFORMS, vol. 27(2), pages 249-267, May.
  55. Cui, Yaozu & Wang, Xingyuan, 2016. "Detecting one-mode communities in bipartite networks by bipartite clustering triangular," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 457(C), pages 307-315.
  56. Wu, Jianshe & Lu, Rui & Jiao, Licheng & Liu, Fang & Yu, Xin & Wang, Da & Sun, Bo, 2013. "Phase transition model for community detection," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 392(6), pages 1287-1301.
  57. Nie, Yanyi & Li, Wenyao & Pan, Liming & Lin, Tao & Wang, Wei, 2022. "Markovian approach to tackle competing pathogens in simplicial complex," Applied Mathematics and Computation, Elsevier, vol. 417(C).
  58. Sylvan Katz, 2012. "Science Policy, Complex Innovation Systems and Performance Measures," SPRU Working Paper Series 198, SPRU - Science Policy Research Unit, University of Sussex Business School.
  59. Eustace, Justine & Wang, Xingyuan & Cui, Yaozu, 2015. "Overlapping community detection using neighborhood ratio matrix," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 421(C), pages 510-521.
  60. Li, Mingming & Liu, Jing, 2018. "A link clustering based memetic algorithm for overlapping community detection," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 503(C), pages 410-423.
  61. Vasiliauskaite, Vaiva & Evans, Tim S. & Expert, Paul, 2022. "Cycle analysis of Directed Acyclic Graphs," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 596(C).
  62. Cerqueti, Roy & Ciciretti, Rocco & Dalò, Ambrogio & Nicolosi, Marco, 2022. "A new measure of the resilience for networks of funds with applications to socially responsible investments," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 593(C).
  63. Yongli Li & Guijie Zhang & Yuqiang Feng & Chong Wu, 2015. "An entropy-based social network community detecting method and its application to scientometrics," Scientometrics, Springer;Akadémiai Kiadó, vol. 102(1), pages 1003-1017, January.
  64. Chen, Qiong & Wu, Ting-Ting & Fang, Ming, 2013. "Detecting local community structures in complex networks based on local degree central nodes," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 392(3), pages 529-537.
  65. Sun, Peng Gang & Ma, Xiaoke & Chi, Juan, 2017. "Dominating complex networks by identifying minimum skeletons," Chaos, Solitons & Fractals, Elsevier, vol. 104(C), pages 182-191.
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  68. Chen, Duanbing & Shang, Mingsheng & Lv, Zehua & Fu, Yan, 2010. "Detecting overlapping communities of weighted networks via a local algorithm," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(19), pages 4177-4187.
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