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Virological assessment of hospitalized patients with COVID-2019

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  1. Susanna Esposito & Federico Marchetti & Marcello Lanari & Fabio Caramelli & Alessandro De Fanti & Gianluca Vergine & Lorenzo Iughetti & Martina Fornaro & Agnese Suppiej & Stefano Zona & Andrea Pession, 2021. "COVID-19 Management in the Pediatric Age: Consensus Document of the COVID-19 Working Group in Paediatrics of the Emilia-Romagna Region (RE-CO-Ped), Italy," IJERPH, MDPI, vol. 18(8), pages 1-29, April.
  2. Anna Maria Cattelan & Lolita Sasset & Federico Zabeo & Anna Ferrari & Lucia Rossi & Maria Mazzitelli & Silvia Cocchio & Vincenzo Baldo, 2022. "Rapid Antigen Test LumiraDx TM vs. Real Time Polymerase Chain Reaction for the Diagnosis of SARS-CoV-2 Infection: A Retrospective Cohort Study," IJERPH, MDPI, vol. 19(7), pages 1-12, March.
  3. Ramon Roozendaal & Laura Solforosi & Daniel J. Stieh & Jan Serroyen & Roel Straetemans & Anna Dari & Muriel Boulton & Frank Wegmann & Sietske K. Rosendahl Huber & Joan E. M. van der Lubbe & Jenny Hend, 2021. "SARS-CoV-2 binding and neutralizing antibody levels after Ad26.COV2.S vaccination predict durable protection in rhesus macaques," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
  4. Ling Zhang & Sirong Zhu & Hui Yao & Mengying Li & Guanglin Si & Xiaodong Tan, 2021. "Study on Factors of People’s Wearing Masks Based on Two Online Surveys: Cross-Sectional Evidence from China," IJERPH, MDPI, vol. 18(7), pages 1-11, March.
  5. Marco Farronato & Santosh K Tadakamadla & Mir Faeq Ali Quadri & Shashidhar Acharya & Jyothi Tadakamadla & Robert M. Love & Mohamed Jamal & Riaan Mulder & Cinzia Maspero & Davide Farronato & Alexander , 2020. "A Call for Action to Safely Deliver Oral Health Care during and Post COVID-19 Pandemic," IJERPH, MDPI, vol. 17(18), pages 1-11, September.
  6. Milad Haghani & Pegah Varamini, 2021. "Temporal evolution, most influential studies and sleeping beauties of the coronavirus literature," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(8), pages 7005-7050, August.
  7. Matteo Peditto & Simone Scapellato & Antonia Marcianò & Paola Costa & Giacomo Oteri, 2020. "Dentistry during the COVID-19 Epidemic: An Italian Workflow for the Management of Dental Practice," IJERPH, MDPI, vol. 17(9), pages 1-15, May.
  8. Shengwei Zhu & Tong Lin & John D. Spengler & Jose Guillermo Cedeño Laurent & Jelena Srebric, 2022. "The Influence of Plastic Barriers on Aerosol Infection Risk during Airport Security Checks," Sustainability, MDPI, vol. 14(18), pages 1-14, September.
  9. Patrick T. Acer & Lauren M. Kelly & Andrew A. Lover & Caitlyn S. Butler, 2022. "Quantifying the Relationship between SARS-CoV-2 Wastewater Concentrations and Building-Level COVID-19 Prevalence at an Isolation Residence: A Passive Sampling Approach," IJERPH, MDPI, vol. 19(18), pages 1-15, September.
  10. Afnan Al Agha & Safiya Alshehaiween & Ahmed Elaiw & Matuka Alshaikh, 2021. "A Global Analysis of Delayed SARS-CoV-2/Cancer Model with Immune Response," Mathematics, MDPI, vol. 9(11), pages 1-27, June.
  11. Hanyu Li & Kazuki Kuga & Kazuhide Ito, 2022. "SARS-CoV-2 Dynamics in the Mucus Layer of the Human Upper Respiratory Tract Based on Host–Cell Dynamics," Sustainability, MDPI, vol. 14(7), pages 1-18, March.
  12. Simin Zou & Xuhui He, 2021. "Effect of Train-Induced Wind on the Transmission of COVID-19: A New Insight into Potential Infectious Risks," IJERPH, MDPI, vol. 18(15), pages 1-17, August.
  13. Shanlin Ke & Scott T. Weiss & Yang-Yu Liu, 2022. "Dissecting the role of the human microbiome in COVID-19 via metagenome-assembled genomes," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
  14. Stanislav Szabo & Sebastián Makó & Michaela Kešeľová & Stanislav Szabo, 2021. "Design of a Unified Algorithm to Ensure the Sustainable Use of Air Transport during a Pandemic," Sustainability, MDPI, vol. 13(11), pages 1-14, May.
  15. Tobias Schlager & Ashley V. Whillans, 2022. "People underestimate the probability of contracting the coronavirus from friends," Palgrave Communications, Palgrave Macmillan, vol. 9(1), pages 1-11, December.
  16. Martin Kriegel & Anne Hartmann & Udo Buchholz & Janna Seifried & Sigrid Baumgarte & Petra Gastmeier, 2021. "SARS-CoV-2 Aerosol Transmission Indoors: A Closer Look at Viral Load, Infectivity, the Effectiveness of Preventive Measures and a Simple Approach for Practical Recommendations," IJERPH, MDPI, vol. 19(1), pages 1-31, December.
  17. John R. Birge & Ozan Candogan & Yiding Feng, 2022. "Controlling Epidemic Spread: Reducing Economic Losses with Targeted Closures," Management Science, INFORMS, vol. 68(5), pages 3175-3195, May.
  18. Yvonne M. Mueller & Thijs J. Schrama & Rik Ruijten & Marco W. J. Schreurs & Dwin G. B. Grashof & Harmen J. G. van de Werken & Giovanna Jona Lasinio & Daniel Álvarez-Sierra & Caoimhe H. Kiernan & Melis, 2022. "Stratification of hospitalized COVID-19 patients into clinical severity progression groups by immuno-phenotyping and machine learning," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
  19. Sasha Harris-Lovett & Kara L. Nelson & Paloma Beamer & Heather N. Bischel & Aaron Bivins & Andrea Bruder & Caitlyn Butler & Todd D. Camenisch & Susan K. De Long & Smruthi Karthikeyan & David A. Larsen, 2021. "Wastewater Surveillance for SARS-CoV-2 on College Campuses: Initial Efforts, Lessons Learned, and Research Needs," IJERPH, MDPI, vol. 18(9), pages 1-20, April.
  20. Ioana Boeraș & Angela Curtean-Bănăduc & Doru Bănăduc & Gabriela Cioca, 2022. "Anthropogenic Sewage Water Circuit as Vector for SARS-CoV-2 Viral ARN Transport and Public Health Assessment, Monitoring and Forecasting—Sibiu Metropolitan Area (Transylvania/Romania) Study Case," IJERPH, MDPI, vol. 19(18), pages 1-12, September.
  21. Monica Neagu & Carolina Constantin & Mihaela Surcel, 2021. "Testing Antigens, Antibodies, and Immune Cells in COVID-19 as a Public Health Topic—Experience and Outlines," IJERPH, MDPI, vol. 18(24), pages 1-16, December.
  22. Chatterjee, Amar Nath & Ahmad, Bashir, 2021. "A fractional-order differential equation model of COVID-19 infection of epithelial cells," Chaos, Solitons & Fractals, Elsevier, vol. 147(C).
  23. Katharina Müller & Philipp Girl & Michaela Ruhnke & Mareike Spranger & Klaus Kaier & Heiner von Buttlar & Gerhard Dobler & Johannes P. Borde, 2021. "SARS-CoV-2 Seroprevalence among Health Care Workers—A Voluntary Screening Study in a Regional Medical Center in Southern Germany," IJERPH, MDPI, vol. 18(8), pages 1-10, April.
  24. Žiga Zaplotnik & Aleksandar Gavrić & Luka Medic, 2020. "Simulation of the COVID-19 epidemic on the social network of Slovenia: Estimating the intrinsic forecast uncertainty," PLOS ONE, Public Library of Science, vol. 15(8), pages 1-22, August.
  25. Xiaoli Wang & Lin Fan & Ziqiang Dai & Li Li & Xianliang Wang, 2022. "Predictive Model for National Minimal CFR during Spontaneous Initial Outbreak of Emerging Infectious Disease: Lessons from COVID-19 Pandemic in 214 Nations and Regions," IJERPH, MDPI, vol. 20(1), pages 1-16, December.
  26. Michela Baccini & Emilia Rocco & Irene Paganini & Alessandra Mattei & Cristina Sani & Giulia Vannucci & Simonetta Bisanzi & Elena Burroni & Marco Peluso & Armelle Munnia & Filippo Cellai & Giampaolo P, 2021. "Pool testing on random and natural clusters of individuals: Optimisation of SARS-CoV-2 surveillance in the presence of low viral load samples," PLOS ONE, Public Library of Science, vol. 16(5), pages 1-15, May.
  27. Bosiljka Tadić & Roderick Melnik, 2020. "Modeling latent infection transmissions through biosocial stochastic dynamics," PLOS ONE, Public Library of Science, vol. 15(10), pages 1-16, October.
  28. Byung Uk Lee, 2020. "Minimum Sizes of Respiratory Particles Carrying SARS-CoV-2 and the Possibility of Aerosol Generation," IJERPH, MDPI, vol. 17(19), pages 1-8, September.
  29. Hafiza Salaha Mahrosh & Ghulam Mustafa, 2021. "The COVID-19 puzzle: a global nightmare," Environment, Development and Sustainability: A Multidisciplinary Approach to the Theory and Practice of Sustainable Development, Springer, vol. 23(9), pages 12710-12737, September.
  30. Esma S Gel & Megan Jehn & Timothy Lant & Anna R Muldoon & Trisalyn Nelson & Heather M Ross, 2020. "COVID-19 healthcare demand projections: Arizona," PLOS ONE, Public Library of Science, vol. 15(12), pages 1-23, December.
  31. Jos Lelieveld & Frank Helleis & Stephan Borrmann & Yafang Cheng & Frank Drewnick & Gerald Haug & Thomas Klimach & Jean Sciare & Hang Su & Ulrich Pöschl, 2020. "Model Calculations of Aerosol Transmission and Infection Risk of COVID-19 in Indoor Environments," IJERPH, MDPI, vol. 17(21), pages 1-18, November.
  32. Ledyz Cuesta-Herrera & Luis Pastenes & Ariel D. Arencibia & Fernando Córdova-Lepe & Cristhian Montoya, 2024. "Dynamics of Activation and Regulation of the Immune Response to Attack by Viral Pathogens Using Mathematical Modeling," Mathematics, MDPI, vol. 12(17), pages 1-15, August.
  33. Niklas Kappelt & Hugo Savill Russell & Szymon Kwiatkowski & Alireza Afshari & Matthew Stanley Johnson, 2021. "Correlation of Respiratory Aerosols and Metabolic Carbon Dioxide," Sustainability, MDPI, vol. 13(21), pages 1-11, November.
  34. Antonella De Donno & Giambattista Lobreglio & Alessandra Panico & Tiziana Grassi & Francesco Bagordo & Maria Pia Bozzetti & Serafina Massari & Luisa Siculella & Fabrizio Damiano & Francesco Guerra & M, 2021. "IgM and IgG Profiles Reveal Peculiar Features of Humoral Immunity Response to SARS-CoV-2 Infection," IJERPH, MDPI, vol. 18(3), pages 1-15, February.
  35. Juan Liu & Fengfeng Mao & Jianhe Chen & Shuaiyao Lu & Yonghe Qi & Yinyan Sun & Linqiang Fang & Man Lung Yeung & Chunmei Liu & Guimei Yu & Guangyu Li & Ximing Liu & Yuansheng Yao & Panpan Huang & Dongx, 2023. "An IgM-like inhalable ACE2 fusion protein broadly neutralizes SARS-CoV-2 variants," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
  36. Audrey McCombs & Claus Kadelka, 2020. "A model-based evaluation of the efficacy of COVID-19 social distancing, testing and hospital triage policies," PLOS Computational Biology, Public Library of Science, vol. 16(10), pages 1-18, October.
  37. Joseph Pateras & Preetam Ghosh, 2022. "A Computational Framework for Exploring SARS-CoV-2 Pharmacodynamic Dose and Timing Regimes," Mathematics, MDPI, vol. 10(20), pages 1-12, October.
  38. Maria de Lourdes Aguiar-Oliveira & Aline Campos & Aline R. Matos & Caroline Rigotto & Adriana Sotero-Martins & Paulo F. P. Teixeira & Marilda M. Siqueira, 2020. "Wastewater-Based Epidemiology (WBE) and Viral Detection in Polluted Surface Water: A Valuable Tool for COVID-19 Surveillance—A Brief Review," IJERPH, MDPI, vol. 17(24), pages 1-19, December.
  39. Andrea Mancusi & Federico Capuano & Santa Girardi & Orlandina Di Maro & Elisabetta Suffredini & Denise Di Concilio & Lucia Vassallo & Maria Concetta Cuomo & Maria Tafuro & Daniel Signorelli & Andrea P, 2022. "Detection of SARS-CoV-2 RNA in Bivalve Mollusks by Droplet Digital RT-PCR (dd RT-PCR)," IJERPH, MDPI, vol. 19(2), pages 1-13, January.
  40. Kumawat, Nitesh & Rashid, Mubasher & Srivastava, Akriti & Tripathi, Jai Prakash, 2023. "Hysteresis and Hopf bifurcation: Deciphering the dynamics of an in-host model of SARS-CoV-2 with logistic target cell growth and sigmoidal immune response," Chaos, Solitons & Fractals, Elsevier, vol. 176(C).
  41. Nagel, Kai & Rakow, Christian & Müller, Sebastian A., 2021. "Realistic agent-based simulation of infection dynamics and percolation," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 584(C).
  42. Marziah Hashimi & T. Andrew Sebrell & Jodi F. Hedges & Deann Snyder & Katrina N. Lyon & Stephanie D. Byrum & Samuel G. Mackintosh & Dan Crowley & Michelle D. Cherne & David Skwarchuk & Amanda Robison , 2023. "Antiviral responses in a Jamaican fruit bat intestinal organoid model of SARS-CoV-2 infection," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
  43. Calvin Pozderac & Brian Skinner, 2021. "Superspreading of SARS-CoV-2 in the USA," PLOS ONE, Public Library of Science, vol. 16(3), pages 1-10, March.
  44. Gregory L Watson & Di Xiong & Lu Zhang & Joseph A Zoller & John Shamshoian & Phillip Sundin & Teresa Bufford & Anne W Rimoin & Marc A Suchard & Christina M Ramirez, 2021. "Pandemic velocity: Forecasting COVID-19 in the US with a machine learning & Bayesian time series compartmental model," PLOS Computational Biology, Public Library of Science, vol. 17(3), pages 1-20, March.
  45. Ethan Obie Romero-Severson & Nick Hengartner & Grant Meadors & Ruian Ke, 2020. "Change in global transmission rates of COVID-19 through May 6 2020," PLOS ONE, Public Library of Science, vol. 15(8), pages 1-12, August.
  46. Julia M. Adler & Ricardo Martin Vidal & Christine Langner & Daria Vladimirova & Azza Abdelgawad & Daniela Kunecova & Xiaoyuan Lin & Geraldine Nouailles & Anne Voss & Sandra Kunder & Achim D. Gruber & , 2024. "An intranasal live-attenuated SARS-CoV-2 vaccine limits virus transmission," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
  47. Jaclyn A. Kaiser & Christine E. Nelson & Xueqiao Liu & Hong-Su Park & Yumiko Matsuoka & Cindy Luongo & Celia Santos & Laura R. H. Ahlers & Richard Herbert & Ian N. Moore & Temeri Wilder-Kofie & Rashid, 2024. "Mucosal prime-boost immunization with live murine pneumonia virus-vectored SARS-CoV-2 vaccine is protective in macaques," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
  48. Sebastian Weigang & Jonas Fuchs & Gert Zimmer & Daniel Schnepf & Lisa Kern & Julius Beer & Hendrik Luxenburger & Jakob Ankerhold & Valeria Falcone & Janine Kemming & Maike Hofmann & Robert Thimme & Ch, 2021. "Within-host evolution of SARS-CoV-2 in an immunosuppressed COVID-19 patient as a source of immune escape variants," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
  49. Marta Baselga & Juan J. Alba & Alberto J. Schuhmacher, 2022. "The Control of Metabolic CO 2 in Public Transport as a Strategy to Reduce the Transmission of Respiratory Infectious Diseases," IJERPH, MDPI, vol. 19(11), pages 1-19, May.
  50. Lisa Cariani & Beatrice Silvia Orena & Federico Ambrogi & Simone Gambazza & Anna Maraschini & Antonella Dodaro & Massimo Oggioni & Annarosa Orlandi & Alessia Pirrone & Sara Uceda Renteria & Mara Berna, 2020. "Time Length of Negativization and Cycle Threshold Values in 182 Healthcare Workers with Covid-19 in Milan, Italy: An Observational Cohort Study," IJERPH, MDPI, vol. 17(15), pages 1-10, July.
  51. Vincent Brault & Bastien Mallein & Jean-François Rupprecht, 2021. "Group testing as a strategy for COVID-19 epidemiological monitoring and community surveillance," PLOS Computational Biology, Public Library of Science, vol. 17(3), pages 1-25, March.
  52. Murk Nizamani & Faisal Ramzan & Mahnoor Fatima & Dr. Muhammad Asif, 2024. "Investigating How Frequent Interactions with AI Technologies Impact Cognitive and Emotional Processes," Bulletin of Business and Economics (BBE), Research Foundation for Humanity (RFH), vol. 13(3), pages 316-325.
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  54. Francesc Aràndiga & Antonio Baeza & Isabel Cordero-Carrión & Rosa Donat & M. Carmen Martí & Pep Mulet & Dionisio F. Yáñez, 2020. "A Spatial-Temporal Model for the Evolution of the COVID-19 Pandemic in Spain Including Mobility," Mathematics, MDPI, vol. 8(10), pages 1-19, October.
  55. Pauline Maisonnasse & Yoann Aldon & Aurélien Marc & Romain Marlin & Nathalie Dereuddre-Bosquet & Natalia A. Kuzmina & Alec W. Freyn & Jonne L. Snitselaar & Antonio Gonçalves & Tom G. Caniels & Judith , 2021. "COVA1-18 neutralizing antibody protects against SARS-CoV-2 in three preclinical models," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
  56. Jing Qi & Yang Zhou & Jiao Hua & Liying Zhang & Jialin Bian & Beibei Liu & Zicen Zhao & Shuilin Jin, 2021. "The scRNA-seq Expression Profiling of the Receptor ACE2 and the Cellular Protease TMPRSS2 Reveals Human Organs Susceptible to SARS-CoV-2 Infection," IJERPH, MDPI, vol. 18(1), pages 1-17, January.
  57. Monika Blišťanová & Michaela Tirpáková & Ľubomíra Brůnová, 2021. "Overview of Safety Measures at Selected Airports during the COVID-19 Pandemic," Sustainability, MDPI, vol. 13(15), pages 1-14, July.
  58. Amit A. Upadhyay & Elise G. Viox & Timothy N. Hoang & Arun K. Boddapati & Maria Pino & Michelle Y.-H. Lee & Jacqueline Corry & Zachary Strongin & David A. Cowan & Elizabeth N. Beagle & Tristan R. Hort, 2023. "TREM2+ and interstitial-like macrophages orchestrate airway inflammation in SARS-CoV-2 infection in rhesus macaques," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
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  60. Dapeng Li & David R. Martinez & Alexandra Schäfer & Haiyan Chen & Maggie Barr & Laura L. Sutherland & Esther Lee & Robert Parks & Dieter Mielke & Whitney Edwards & Amanda Newman & Kevin W. Bock & Mahn, 2022. "Breadth of SARS-CoV-2 neutralization and protection induced by a nanoparticle vaccine," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
  61. Mario Rivera-Izquierdo & María del Carmen Valero-Ubierna & Silvia Martínez-Diz & Miguel Ángel Fernández-García & Divina Tatiana Martín-Romero & Francisco Maldonado-Rodríguez & María Rosa Sánchez-Pérez, 2020. "Clinical Factors, Preventive Behaviours and Temporal Outcomes Associated with COVID-19 Infection in Health Professionals at a Spanish Hospital," IJERPH, MDPI, vol. 17(12), pages 1-13, June.
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  63. Robert M. Cox & Carolin M. Lieber & Josef D. Wolf & Amirhossein Karimi & Nicole A. P. Lieberman & Zachary M. Sticher & Pavitra Roychoudhury & Meghan K. Andrews & Rebecca E. Krueger & Michael G. Natchu, 2023. "Comparing molnupiravir and nirmatrelvir/ritonavir efficacy and the effects on SARS-CoV-2 transmission in animal models," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
  64. Abdin, Adam F. & Fang, Yi-Ping & Caunhye, Aakil & Alem, Douglas & Barros, Anne & Zio, Enrico, 2023. "An optimization model for planning testing and control strategies to limit the spread of a pandemic – The case of COVID-19," European Journal of Operational Research, Elsevier, vol. 304(1), pages 308-324.
  65. Rabih Ghostine & Mohamad Gharamti & Sally Hassrouny & Ibrahim Hoteit, 2021. "Mathematical Modeling of Immune Responses against SARS-CoV-2 Using an Ensemble Kalman Filter," Mathematics, MDPI, vol. 9(19), pages 1-13, September.
  66. Angela Sloan & Todd Cutts & Bryan D Griffin & Samantha Kasloff & Zachary Schiffman & Mable Chan & Jonathan Audet & Anders Leung & Darwyn Kobasa & Derek R Stein & David Safronetz & Guillaume Poliquin, 2021. "Simulated sunlight decreases the viability of SARS-CoV-2 in mucus," PLOS ONE, Public Library of Science, vol. 16(6), pages 1-9, June.
  67. Lorenz Schubert & Robert Strassl & Heinz Burgmann & Gabriella Dvorak & Matthias Karer & Michael Kundi & Manuel Kussmann & Heimo Lagler & Felix Lötsch & Christopher Milacek & Markus Obermueller & Zoe O, 2021. "A Longitudinal Seroprevalence Study Evaluating Infection Control and Prevention Strategies at a Large Tertiary Care Center with Low COVID-19 Incidence," IJERPH, MDPI, vol. 18(8), pages 1-10, April.
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