Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity
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DOI: 10.1371/journal.pcbi.1006446
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- Francesca Mastrogiuseppe & Srdjan Ostojic, 2017. "Intrinsically-generated fluctuating activity in excitatory-inhibitory networks," PLOS Computational Biology, Public Library of Science, vol. 13(4), pages 1-40, April.
- Volker Pernice & Benjamin Staude & Stefano Cardanobile & Stefan Rotter, 2011. "How Structure Determines Correlations in Neuronal Networks," PLOS Computational Biology, Public Library of Science, vol. 7(5), pages 1-14, May.
- Wei-Chung Allen Lee & Vincent Bonin & Michael Reed & Brett J. Graham & Greg Hood & Katie Glattfelder & R. Clay Reid, 2016. "Anatomy and function of an excitatory network in the visual cortex," Nature, Nature, vol. 532(7599), pages 370-374, April.
- Jonathan W. Pillow & Jonathon Shlens & Liam Paninski & Alexander Sher & Alan M. Litke & E. J. Chichilnisky & Eero P. Simoncelli, 2008. "Spatio-temporal correlations and visual signalling in a complete neuronal population," Nature, Nature, vol. 454(7207), pages 995-999, August.
- Kevin L. Briggman & Moritz Helmstaedter & Winfried Denk, 2011. "Wiring specificity in the direction-selectivity circuit of the retina," Nature, Nature, vol. 471(7337), pages 183-188, March.
- Elad Schneidman & Michael J. Berry & Ronen Segev & William Bialek, 2006. "Weak pairwise correlations imply strongly correlated network states in a neural population," Nature, Nature, vol. 440(7087), pages 1007-1012, April.
- Dimitri Yatsenko & Krešimir Josić & Alexander S Ecker & Emmanouil Froudarakis & R James Cotton & Andreas S Tolias, 2015. "Improved Estimation and Interpretation of Correlations in Neural Circuits," PLOS Computational Biology, Public Library of Science, vol. 11(3), pages 1-28, March.
- Yang-Yu Liu & Jean-Jacques Slotine & Albert-László Barabási, 2011. "Controllability of complex networks," Nature, Nature, vol. 473(7346), pages 167-173, May.
- Gabriel Koch Ocker & Krešimir Josić & Eric Shea-Brown & Michael A Buice, 2017. "Linking structure and activity in nonlinear spiking networks," PLOS Computational Biology, Public Library of Science, vol. 13(6), pages 1-47, June.
- Yu Hu & Joel Zylberberg & Eric Shea-Brown, 2014. "The Sign Rule and Beyond: Boundary Effects, Flexibility, and Noise Correlations in Neural Population Codes," PLOS Computational Biology, Public Library of Science, vol. 10(2), pages 1-22, February.
- N. Alex Cayco-Gajic & Claudia Clopath & R. Angus Silver, 2017. "Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks," Nature Communications, Nature, vol. 8(1), pages 1-11, December.
- Gabriel Koch Ocker & Ashok Litwin-Kumar & Brent Doiron, 2015. "Self-Organization of Microcircuits in Networks of Spiking Neurons with Plastic Synapses," PLOS Computational Biology, Public Library of Science, vol. 11(8), pages 1-40, August.
- James Trousdale & Yu Hu & Eric Shea-Brown & Krešimir Josić, 2012. "Impact of Network Structure and Cellular Response on Spike Time Correlations," PLOS Computational Biology, Public Library of Science, vol. 8(3), pages 1-15, March.
- Davi D. Bock & Wei-Chung Allen Lee & Aaron M. Kerlin & Mark L. Andermann & Greg Hood & Arthur W. Wetzel & Sergey Yurgenson & Edward R. Soucy & Hyon Suk Kim & R. Clay Reid, 2011. "Network anatomy and in vivo physiology of visual cortical neurons," Nature, Nature, vol. 471(7337), pages 177-182, March.
- Spencer L. Smith & Ikuko T. Smith & Tiago Branco & Michael Häusser, 2013. "Dendritic spikes enhance stimulus selectivity in cortical neurons in vivo," Nature, Nature, vol. 503(7474), pages 115-120, November.
- Jaime de la Rocha & Brent Doiron & Eric Shea-Brown & Krešimir Josić & Alex Reyes, 2007. "Correlation between neural spike trains increases with firing rate," Nature, Nature, vol. 448(7155), pages 802-806, August.
- Lee Cossell & Maria Florencia Iacaruso & Dylan R. Muir & Rachael Houlton & Elie N. Sader & Ho Ko & Sonja B. Hofer & Thomas D. Mrsic-Flogel, 2015. "Functional organization of excitatory synaptic strength in primary visual cortex," Nature, Nature, vol. 518(7539), pages 399-403, February.
- Ryan C Williamson & Benjamin R Cowley & Ashok Litwin-Kumar & Brent Doiron & Adam Kohn & Matthew A Smith & Byron M Yu, 2016. "Scaling Properties of Dimensionality Reduction for Neural Populations and Network Models," PLOS Computational Biology, Public Library of Science, vol. 12(12), pages 1-27, December.
- Timothy P. Lillicrap & Daniel Cownden & Douglas B. Tweed & Colin J. Akerman, 2016. "Random synaptic feedback weights support error backpropagation for deep learning," Nature Communications, Nature, vol. 7(1), pages 1-10, December.
- Moritz Helmstaedter & Kevin L. Briggman & Srinivas C. Turaga & Viren Jain & H. Sebastian Seung & Winfried Denk, 2013. "Connectomic reconstruction of the inner plexiform layer in the mouse retina," Nature, Nature, vol. 500(7461), pages 168-174, August.
- Tomoko Ohyama & Casey M. Schneider-Mizell & Richard D. Fetter & Javier Valdes Aleman & Romain Franconville & Marta Rivera-Alba & Brett D. Mensh & Kristin M. Branson & Julie H. Simpson & James W. Truma, 2015. "A multilevel multimodal circuit enhances action selection in Drosophila," Nature, Nature, vol. 520(7549), pages 633-639, April.
- Editors The, 2007. "From the Editors," Basic Income Studies, De Gruyter, vol. 2(1), pages 1-5, June.
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