IDEAS home Printed from https://ideas.repec.org/a/gam/jmathe/v9y2021i11p1243-d564765.html
   My bibliography  Save this article

Bi-Smoothed Functional Independent Component Analysis for EEG Artifact Removal

Author

Listed:
  • Marc Vidal

    (Institute of Psychoacoustics and Electronic Music (IPEM), Ghent University, 9000 Ghent, Belgium
    Department of Statistics and O.R. and IMAG, University of Granada, 18071 Granada, Spain)

  • Mattia Rosso

    (Institute of Psychoacoustics and Electronic Music (IPEM), Ghent University, 9000 Ghent, Belgium)

  • Ana M. Aguilera

    (Department of Statistics and O.R. and IMAG, University of Granada, 18071 Granada, Spain)

Abstract

Motivated by mapping adverse artifactual events caused by body movements in electroencephalographic (EEG) signals, we present a functional independent component analysis based on the spectral decomposition of the kurtosis operator of a smoothed principal component expansion. A discrete roughness penalty is introduced in the orthonormality constraint of the covariance eigenfunctions in order to obtain the smoothed basis for the proposed independent component model. To select the tuning parameters, a cross-validation method that incorporates shrinkage is used to enhance the performance on functional representations with a large basis dimension. This method provides an estimation strategy to determine the penalty parameter and the optimal number of components. Our independent component approach is applied to real EEG data to estimate genuine brain potentials from a contaminated signal. As a result, it is possible to control high-frequency remnants of neural origin overlapping artifactual sources to optimize their removal from the signal. An R package implementing our methods is available at CRAN.

Suggested Citation

  • Marc Vidal & Mattia Rosso & Ana M. Aguilera, 2021. "Bi-Smoothed Functional Independent Component Analysis for EEG Artifact Removal," Mathematics, MDPI, vol. 9(11), pages 1-17, May.
  • Handle: RePEc:gam:jmathe:v:9:y:2021:i:11:p:1243-:d:564765
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/2227-7390/9/11/1243/pdf
    Download Restriction: no

    File URL: https://www.mdpi.com/2227-7390/9/11/1243/
    Download Restriction: no
    ---><---

    References listed on IDEAS

    as
    1. N. Locantore & J. Marron & D. Simpson & N. Tripoli & J. Zhang & K. Cohen & Graciela Boente & Ricardo Fraiman & Babette Brumback & Christophe Croux & Jianqing Fan & Alois Kneip & John Marden & Daniel P, 1999. "Robust principal component analysis for functional data," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 8(1), pages 1-73, June.
    2. Kollo, Tõnu, 2008. "Multivariate skewness and kurtosis measures with an application in ICA," Journal of Multivariate Analysis, Elsevier, vol. 99(10), pages 2328-2338, November.
    3. Qi, Xin & Zhao, Hongyu, 2011. "Some theoretical properties of Silverman's method for Smoothed functional principal component analysis," Journal of Multivariate Analysis, Elsevier, vol. 102(4), pages 741-767, April.
    4. Schäfer Juliane & Strimmer Korbinian, 2005. "A Shrinkage Approach to Large-Scale Covariance Matrix Estimation and Implications for Functional Genomics," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 4(1), pages 1-32, November.
    5. M. Aguilera-Morillo & Ana Aguilera & Manuel Escabias & Mariano Valderrama, 2013. "Penalized spline approaches for functional logit regression," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 22(2), pages 251-277, June.
    6. Ocaña, F. A. & Aguilera, A. M. & Valderrama, M. J., 1999. "Functional Principal Components Analysis by Choice of Norm," Journal of Multivariate Analysis, Elsevier, vol. 71(2), pages 262-276, November.
    7. Virta, Joni & Li, Bing & Nordhausen, Klaus & Oja, Hannu, 2020. "Independent component analysis for multivariate functional data," Journal of Multivariate Analysis, Elsevier, vol. 176(C).
    8. Francisco Ocaña & Ana Aguilera & Manuel Escabias, 2007. "Computational considerations in functional principal component analysis," Computational Statistics, Springer, vol. 22(3), pages 449-465, September.
    9. Kyle Hasenstab & Aaron Scheffler & Donatello Telesca & Catherine A. Sugar & Shafali Jeste & Charlotte DiStefano & Damla Şentürk, 2017. "A multi-dimensional functional principal components analysis of EEG data," Biometrics, The International Biometric Society, vol. 73(3), pages 999-1009, September.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Christian Acal & Ana M. Aguilera, 2023. "Basis expansion approaches for functional analysis of variance with repeated measures," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 17(2), pages 291-321, June.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Christian Acal & Manuel Escabias & Ana M. Aguilera & Mariano J. Valderrama, 2021. "COVID-19 Data Imputation by Multiple Function-on-Function Principal Component Regression," Mathematics, MDPI, vol. 9(11), pages 1-23, May.
    2. Lakraj, Gamage Pemantha & Ruymgaart, Frits, 2017. "Some asymptotic theory for Silverman’s smoothed functional principal components in an abstract Hilbert space," Journal of Multivariate Analysis, Elsevier, vol. 155(C), pages 122-132.
    3. Ana M. Aguilera, 2016. "Comments on: Probability enhanced effective dimension reduction for classifying sparse functional data," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(1), pages 23-26, March.
    4. Ana Aguilera, 2016. "Comments on: Probability enhanced effective dimension reduction for classifying sparse functional data," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(1), pages 23-26, March.
    5. Christian Acal & Ana M. Aguilera & Manuel Escabias, 2020. "New Modeling Approaches Based on Varimax Rotation of Functional Principal Components," Mathematics, MDPI, vol. 8(11), pages 1-15, November.
    6. Aguilera-Morillo, M. Carmen & Aguilera, Ana M. & Jiménez-Molinos, Francisco & Roldán, Juan B., 2019. "Stochastic modeling of Random Access Memories reset transitions," Mathematics and Computers in Simulation (MATCOM), Elsevier, vol. 159(C), pages 197-209.
    7. Sudaraka Tholkage & Qi Zheng & Karunarathna B. Kulasekera, 2022. "Conditional Kaplan–Meier Estimator with Functional Covariates for Time-to-Event Data," Stats, MDPI, vol. 5(4), pages 1-17, November.
    8. van der Linde, Angelika, 2008. "Variational Bayesian functional PCA," Computational Statistics & Data Analysis, Elsevier, vol. 53(2), pages 517-533, December.
    9. Paula R. Bouzas & Ana M. Aguilera & Nuria Ruiz-Fuentes, 2012. "Functional Estimation of the Random Rate of a Cox Process," Methodology and Computing in Applied Probability, Springer, vol. 14(1), pages 57-69, March.
    10. Pesonen, Maiju & Pesonen, Henri & Nevalainen, Jaakko, 2015. "Covariance matrix estimation for left-censored data," Computational Statistics & Data Analysis, Elsevier, vol. 92(C), pages 13-25.
    11. Ana M. Aguilera & Manuel Escabias & Francisco A. Ocaña & Mariano J. Valderrama, 2015. "Functional Wavelet-Based Modelling of Dependence Between Lupus and Stress," Methodology and Computing in Applied Probability, Springer, vol. 17(4), pages 1015-1028, December.
    12. Aguilera, Ana M. & Escabias, Manuel & Valderrama, Mariano J., 2008. "Discussion of different logistic models with functional data. Application to Systemic Lupus Erythematosus," Computational Statistics & Data Analysis, Elsevier, vol. 53(1), pages 151-163, September.
    13. Michael Greenacre & Patrick J. F Groenen & Trevor Hastie & Alfonso Iodice d’Enza & Angelos Markos & Elena Tuzhilina, 2023. "Principal component analysis," Economics Working Papers 1856, Department of Economics and Business, Universitat Pompeu Fabra.
    14. Jolliffe, Ian, 2022. "A 50-year personal journey through time with principal component analysis," Journal of Multivariate Analysis, Elsevier, vol. 188(C).
    15. Zhong, Rou & Liu, Shishi & Li, Haocheng & Zhang, Jingxiao, 2022. "Robust functional principal component analysis for non-Gaussian longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 189(C).
    16. Hannart, Alexis & Naveau, Philippe, 2014. "Estimating high dimensional covariance matrices: A new look at the Gaussian conjugate framework," Journal of Multivariate Analysis, Elsevier, vol. 131(C), pages 149-162.
    17. Avagyan, Vahe & Nogales, Francisco J., 2015. "D-trace Precision Matrix Estimation Using Adaptive Lasso Penalties," DES - Working Papers. Statistics and Econometrics. WS 21775, Universidad Carlos III de Madrid. Departamento de Estadística.
    18. Sreenivasa Rao Jammalamadaka & Emanuele Taufer & György H. Terdik, 2021. "Asymptotic theory for statistics based on cumulant vectors with applications," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 48(2), pages 708-728, June.
    19. Jianqing Fan & Xu Han, 2017. "Estimation of the false discovery proportion with unknown dependence," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 79(4), pages 1143-1164, September.
    20. Wang Xiaoming & Dinu Irina & Liu Wei & Yasui Yutaka, 2011. "Linear Combination Test for Hierarchical Gene Set Analysis," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 10(1), pages 1-18, March.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jmathe:v:9:y:2021:i:11:p:1243-:d:564765. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.