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A high-resolution model of bat diversity and endemism for continental Africa

Author

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  • Herkt, K. Matthias B.
  • Barnikel, Günter
  • Skidmore, Andrew K.
  • Fahr, Jakob

Abstract

Bats are the second-most species-rich mammal group numbering more than 1270 species globally. Our knowledge of their geographic distributions and diversity patterns however is very limited – possibly the poorest among mammals – mainly due to their nocturnal and volant life history, and challenging fieldwork conditions in the tropics where most bat species occur. This knowledge gap obscures the geographic extent of ecosystem services provided by bats (i.e. pollination, seed dispersal and insect control), translates into inefficient conservation policies, and restricts macroecological analyses to coarse spatial resolutions. In contrast to the currently prevailing method of estimating species distributions using expert-drawn range maps, correlative species distribution models (SDMs) can provide estimates at very fine spatial grains and largely account for widespread sample bias as well as the prevalent Wallacean shortfall in species occurrence data. Very few such studies have hitherto been published that cover a large and complete taxonomic group with fine resolution at continental extent. Using an unparalleled amount of occurrence data, the MaxEnt algorithm and tailored solutions to specific modelling challenges, we created SDMs for nearly all 250 African bat species to explore emerging diversity patterns at a resolution of 1km2. Predicted species richness generally increases towards the equator conforming to expectations. Within the tropical area of elevated richness, several pronounced richness peaks and lows stand out, hinting at a complex interplay of determining factors. Richness gradients are often steep, decreasing strongly away from streams, and especially so in savanna biomes. Species richness also seems positively associated with rugged terrain, in particular at lower elevations. Centres of endemism are found primarily at low latitudes near major elevational ranges. Overlap with hotspots of species richness is rather low, and confined to five or six topodiverse, relatively low lying areas between western Guinea and the East African coast. Several poorly sampled regions are identified that may represent rewarding future survey targets. Our results demonstrate the value of stacking SDMs to infer plausible continent-wide diversity gradients at a spatial resolution fine enough to directly inform conservation policies and to open up new avenues in macroecological research.

Suggested Citation

  • Herkt, K. Matthias B. & Barnikel, Günter & Skidmore, Andrew K. & Fahr, Jakob, 2016. "A high-resolution model of bat diversity and endemism for continental Africa," Ecological Modelling, Elsevier, vol. 320(C), pages 9-28.
  • Handle: RePEc:eee:ecomod:v:320:y:2016:i:c:p:9-28
    DOI: 10.1016/j.ecolmodel.2015.09.009
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    1. John F. Lamoreux & John C. Morrison & Taylor H. Ricketts & David M. Olson & Eric Dinerstein & Meghan W. McKnight & Herman H. Shugart, 2006. "Global tests of biodiversity concordance and the importance of endemism," Nature, Nature, vol. 440(7081), pages 212-214, March.
    2. Boria, Robert A. & Olson, Link E. & Goodman, Steven M. & Anderson, Robert P., 2014. "Spatial filtering to reduce sampling bias can improve the performance of ecological niche models," Ecological Modelling, Elsevier, vol. 275(C), pages 73-77.
    3. Gill Ward & Trevor Hastie & Simon Barry & Jane Elith & John R. Leathwick, 2009. "Presence-Only Data and the EM Algorithm," Biometrics, The International Biometric Society, vol. 65(2), pages 554-563, June.
    4. Bradley J. Cardinale & J. Emmett Duffy & Andrew Gonzalez & David U. Hooper & Charles Perrings & Patrick Venail & Anita Narwani & Georgina M. Mace & David Tilman & David A. Wardle & Ann P. Kinzig & Gre, 2012. "Biodiversity loss and its impact on humanity," Nature, Nature, vol. 486(7401), pages 59-67, June.
    5. Saupe, E.E. & Barve, V. & Myers, C.E. & Soberón, J. & Barve, N. & Hensz, C.M. & Peterson, A.T. & Owens, H.L. & Lira-Noriega, A., 2012. "Variation in niche and distribution model performance: The need for a priori assessment of key causal factors," Ecological Modelling, Elsevier, vol. 237, pages 11-22.
    6. Norman Myers & Russell A. Mittermeier & Cristina G. Mittermeier & Gustavo A. B. da Fonseca & Jennifer Kent, 2000. "Biodiversity hotspots for conservation priorities," Nature, Nature, vol. 403(6772), pages 853-858, February.
    7. Jason L. Brown & Alison Cameron & Anne D. Yoder & Miguel Vences, 2014. "A necessarily complex model to explain the biogeography of the amphibians and reptiles of Madagascar," Nature Communications, Nature, vol. 5(1), pages 1-10, December.
    8. Christopher J. Raxworthy & Enrique Martinez-Meyer & Ned Horning & Ronald A. Nussbaum & Gregory E. Schneider & Miguel A. Ortega-Huerta & A. Townsend Peterson, 2003. "Predicting distributions of known and unknown reptile species in Madagascar," Nature, Nature, vol. 426(6968), pages 837-841, December.
    9. Shcheglovitova, Mariya & Anderson, Robert P., 2013. "Estimating optimal complexity for ecological niche models: A jackknife approach for species with small sample sizes," Ecological Modelling, Elsevier, vol. 269(C), pages 9-17.
    10. Rubén G Mateo & Ángel M Felicísimo & Julien Pottier & Antoine Guisan & Jesús Muñoz, 2012. "Do Stacked Species Distribution Models Reflect Altitudinal Diversity Patterns?," PLOS ONE, Public Library of Science, vol. 7(3), pages 1-9, March.
    11. Peterson, A. Townsend & Papeş, Monica & Soberón, Jorge, 2008. "Rethinking receiver operating characteristic analysis applications in ecological niche modeling," Ecological Modelling, Elsevier, vol. 213(1), pages 63-72.
    12. Barve, Narayani & Barve, Vijay & Jiménez-Valverde, Alberto & Lira-Noriega, Andrés & Maher, Sean P. & Peterson, A. Townsend & Soberón, Jorge & Villalobos, Fabricio, 2011. "The crucial role of the accessible area in ecological niche modeling and species distribution modeling," Ecological Modelling, Elsevier, vol. 222(11), pages 1810-1819.
    13. Anderson, Robert P. & Gonzalez, Israel, 2011. "Species-specific tuning increases robustness to sampling bias in models of species distributions: An implementation with Maxent," Ecological Modelling, Elsevier, vol. 222(15), pages 2796-2811.
    14. Platts, Philip J. & McClean, Colin J. & Lovett, Jon C. & Marchant, Rob, 2008. "Predicting tree distributions in an East African biodiversity hotspot: model selection, data bias and envelope uncertainty," Ecological Modelling, Elsevier, vol. 218(1), pages 121-134.
    15. C. David L. Orme & Richard G. Davies & Malcolm Burgess & Felix Eigenbrod & Nicola Pickup & Valerie A. Olson & Andrea J. Webster & Tzung-Su Ding & Pamela C. Rasmussen & Robert S. Ridgely & Ali J. Statt, 2005. "Global hotspots of species richness are not congruent with endemism or threat," Nature, Nature, vol. 436(7053), pages 1016-1019, August.
    16. W. Jetz & G. H. Thomas & J. B. Joy & K. Hartmann & A. O. Mooers, 2012. "The global diversity of birds in space and time," Nature, Nature, vol. 491(7424), pages 444-448, November.
    17. VanDerWal, Jeremy & Shoo, Luke P. & Graham, Catherine & Williams, Stephen E., 2009. "Selecting pseudo-absence data for presence-only distribution modeling: How far should you stray from what you know?," Ecological Modelling, Elsevier, vol. 220(4), pages 589-594.
    18. Richard Grenyer & C. David L. Orme & Sarah F. Jackson & Gavin H. Thomas & Richard G. Davies & T. Jonathan Davies & Kate E. Jones & Valerie A. Olson & Robert S. Ridgely & Pamela C. Rasmussen & Tzung-Su, 2006. "Global distribution and conservation of rare and threatened vertebrates," Nature, Nature, vol. 444(7115), pages 93-96, November.
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