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MCMC Methods for Multi-Response Generalized Linear Mixed Models: The MCMCglmm R Package

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Cited by:

  1. Roman Lyach, 2021. "Harvest Rates of Rheophilic Fish Vimba vimba , Chondrostoma nasus , and Barbus barbus Have a Strong Relationship with Restocking Rates and Harvest Rates of Their Predator Silurus glanis in Lowland Mes," Sustainability, MDPI, vol. 13(20), pages 1-14, October.
  2. Ashleigh S Griffin & Suzanne H Alonzo & Charlie K Cornwallis, 2013. "Why Do Cuckolded Males Provide Paternal Care?," PLOS Biology, Public Library of Science, vol. 11(3), pages 1-9, March.
  3. repec:jss:jstsof:35:i04 is not listed on IDEAS
  4. Heinrich, Tobias & Kobayashi, Yoshiharu & Bryant, Kristin A., 2016. "Public Opinion and Foreign Aid Cuts in Economic Crises," World Development, Elsevier, vol. 77(C), pages 66-79.
  5. Jamie Dunning & Terry Burke & Alex Hoi Hang Chan & Heung Ying Janet Chik & Tim Evans & Julia Schroeder, 2023. "Opposite-sex associations are linked with annual fitness, but sociality is stable over lifetime," Behavioral Ecology, International Society for Behavioral Ecology, vol. 34(3), pages 315-324.
  6. Kim, Seheon & Rasouli, Soora & Timmermans, Harry & Yang, Dujuan, 2018. "Estimating panel effects in probabilistic representations of dynamic decision trees using bayesian generalized linear mixture models," Transportation Research Part B: Methodological, Elsevier, vol. 111(C), pages 168-184.
  7. Kitano, Shinichi & Yamamoto, Naotoshi, 2020. "The role of consumer knowledge, experience,and heterogeneity in fish consumption: Policy lessons from Japan," Journal of Retailing and Consumer Services, Elsevier, vol. 56(C).
  8. Wolfgang Goymann & John C. Wingfield, 2014. "Male-to-female testosterone ratios, dimorphism, and life history—what does it really tell us?," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(4), pages 685-699.
  9. Pankaj Kumar & Xiaojin Liu & Akbar Zaheer, 2022. "How much does the firm's alliance network matter?," Strategic Management Journal, Wiley Blackwell, vol. 43(8), pages 1433-1468, August.
  10. Philipp Meyer‐Doyle & Sunkee Lee & Constance E. Helfat, 2019. "Disentangling the microfoundations of acquisition behavior and performance," Strategic Management Journal, Wiley Blackwell, vol. 40(11), pages 1733-1756, November.
  11. Sally E. Street & Tuomas Eerola & Jeremy R. Kendal, 2022. "The role of population size in folk tune complexity," Palgrave Communications, Palgrave Macmillan, vol. 9(1), pages 1-12, December.
  12. Jay P. McEntee, 2014. "Reciprocal territorial responses of parapatric African sunbirds: species-level asymmetry and intraspecific geographic variation," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(6), pages 1380-1394.
  13. I. Albarrán & P. Alonso-González & J. M. Marin, 2017. "Some criticism to a general model in Solvency II: an explanation from a clustering point of view," Empirical Economics, Springer, vol. 52(4), pages 1289-1308, June.
  14. Saeede Ajorlou & Issac Shams & Kai Yang, 2015. "An analytics approach to designing patient centered medical homes," Health Care Management Science, Springer, vol. 18(1), pages 3-18, March.
  15. Krieg Sabine & Boonstra Harm Jan & Smeets Marc, 2016. "Small-Area Estimation with Zero-Inflated Data – a Simulation Study," Journal of Official Statistics, Sciendo, vol. 32(4), pages 963-986, December.
  16. Nicolas A Menzies & Andres A Berruti & John M Blandford, 2012. "The Determinants of HIV Treatment Costs in Resource Limited Settings," PLOS ONE, Public Library of Science, vol. 7(11), pages 1-9, November.
  17. Andrés López-Sepulcre & Sebastiano De Bona & Janne K. Valkonen & Kate D.L. Umbers & Johanna Mappes, 2015. "Item Response Trees: a recommended method for analyzing categorical data in behavioral studies," Behavioral Ecology, International Society for Behavioral Ecology, vol. 26(5), pages 1268-1273.
  18. Jesse Shore & Ethan Bernstein & David Lazer, 2014. "Facts and Figuring: An Experimental Investigation of Network Structure and Performance in Information and Solution Spaces," Harvard Business School Working Papers 14-075, Harvard Business School, revised Jun 2014.
  19. Tobias Heinrich & Timothy M. Peterson, 2020. "Foreign Policy as Pork-barrel Spending: Incentives for Legislator Credit Claiming on Foreign Aid," Journal of Conflict Resolution, Peace Science Society (International), vol. 64(7-8), pages 1418-1442, August.
  20. Weliton Menário & Wendy J King & Timothée Bonnet & Marco Festa-Bianchet & Loeske E B Kruuk, 2023. "Early-life behavior, survival, and maternal personality in a wild marsupial," Behavioral Ecology, International Society for Behavioral Ecology, vol. 34(6), pages 1002-1012.
  21. Alonso, Pablo J., 2011. "Why using a general model in Solvency II is not a good idea : an explanation from a Bayesian point of view," DES - Working Papers. Statistics and Econometrics. WS ws113729, Universidad Carlos III de Madrid. Departamento de Estadística.
  22. Jon E. Brommer & Patrik Karell & Kari Ahola & Teuvo Karstinen, 2014. "Residual correlations, and not individual properties, determine a nest defense boldness syndrome," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(4), pages 802-812.
  23. Tobias Heinrich & Christopher Witko, 2021. "Technology‐Induced Job Loss and the Prioritization of Economic Problems in the Mass Public," Review of Policy Research, Policy Studies Organization, vol. 38(2), pages 164-179, March.
  24. Kandt, Jens & Leak, Alistair, 2019. "Examining inclusive mobility through smartcard data: What shall we make of senior citizens' declining bus patronage in the West Midlands?," Journal of Transport Geography, Elsevier, vol. 79(C), pages 1-1.
  25. Diego Montano, 2017. "Multivariate hierarchical Bayesian models and choice of priors in the analysis of survey data," Journal of Applied Statistics, Taylor & Francis Journals, vol. 44(16), pages 3011-3032, December.
  26. Sofia Gil-Clavel & Clara H. Mulder, 2024. "Does Twitter Data Mirror the European North–South Family Ties Divide? A Comparative Analysis of Tweets About Family," Population Research and Policy Review, Springer;Southern Demographic Association (SDA), vol. 43(4), pages 1-24, August.
  27. Bakar, Khandoker Shuvo & Sahu, Sujit K., 2015. "spTimer: Spatio-Temporal Bayesian Modeling Using R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 63(i15).
  28. Hart, Jordan D. A. & Franks, Daniel Wayne & Brent, Lauren & Weiss, Michael N., 2022. "bisonR - Bayesian Inference of Social Networks with R," OSF Preprints ywu7j, Center for Open Science.
  29. Spark C. Tseung & Ian Weng Chan & Tsz Chai Fung & Andrei L. Badescu & X. Sheldon Lin, 2022. "A Posteriori Risk Classification and Ratemaking with Random Effects in the Mixture-of-Experts Model," Papers 2209.15212, arXiv.org.
  30. Lihui Zhao & Tom Chen & Vladimir Novitsky & Rui Wang, 2021. "Joint penalized spline modeling of multivariate longitudinal data, with application to HIV‐1 RNA load levels and CD4 cell counts," Biometrics, The International Biometric Society, vol. 77(3), pages 1061-1074, September.
  31. Giada Adelfio & Giovanni Boscaino, 2016. "Degree course change and student performance: a mixed-effect model approach," Journal of Applied Statistics, Taylor & Francis Journals, vol. 43(1), pages 3-15, January.
  32. Mahmood, Ammara & Sismeiro, Catarina, 2017. "Will They Come and Will They Stay? Online Social Networks and News Consumption on External Websites," Journal of Interactive Marketing, Elsevier, vol. 37(C), pages 117-132.
  33. Lenth, Russell V., 2016. "Least-Squares Means: The R Package lsmeans," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 69(i01).
  34. Parady, Giancarlos & Frei, Andreas & Kowald, Matthias & Guidon, Sergio & Wicki, Michael & van den Berg, Pauline & Carrasco, Juan-Antonio & Arentze, Theo & Timmermans, Harry & Wellman, Barry & Takami, , 2021. "A comparative study of social interaction frequencies among social network members in five countries," Journal of Transport Geography, Elsevier, vol. 90(C).
  35. Jesse Shore & Ethan Bernstein & David Lazer, 2015. "Facts and Figuring: An Experimental Investigation of Network Structure and Performance in Information and Solution Spaces," Organization Science, INFORMS, vol. 26(5), pages 1432-1446, October.
  36. Wagner Hugo Bonat & Bent Jørgensen, 2016. "Multivariate covariance generalized linear models," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 65(5), pages 649-675, November.
  37. Lauren Hepburn & Adam C. Smith & John Zelenski & Lenore Fahrig, 2021. "Bird Diversity Unconsciously Increases People’s Satisfaction with Where They Live," Land, MDPI, vol. 10(2), pages 1-19, February.
  38. Helbling, Marc & Traunmüller, Richard, 2016. "How state support of religion shapes attitudes toward Muslim immigrants: New evidence from a sub-national comparison," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 49(3), pages 391-424.
  39. Adam D Hayward & Daniel H Nussey & Alastair J Wilson & Camillo Berenos & Jill G Pilkington & Kathryn A Watt & Josephine M Pemberton & Andrea L Graham, 2014. "Natural Selection on Individual Variation in Tolerance of Gastrointestinal Nematode Infection," PLOS Biology, Public Library of Science, vol. 12(7), pages 1-13, July.
  40. Fontana, Magda & Iori, Martina & Nava, Consuelo Rubina, 2019. "Switching behavior in the Italian electricity retail market: Logistic and mixed effect Bayesian estimations of consumer choice," Energy Policy, Elsevier, vol. 129(C), pages 339-351.
  41. Pessotto, Ana Paula & Costa, Carlos & Schwinghamer, Timothy & Colle, Gabriel & Corte, Vitor Francisco Dalla, 2019. "Factors influencing intergenerational succession in family farm businesses in Brazil," Land Use Policy, Elsevier, vol. 87(C).
  42. Daina Chiba & Tobias Heinrich, 2019. "Colonial Legacy and Foreign Aid: Decomposing the Colonial Bias," International Interactions, Taylor & Francis Journals, vol. 45(3), pages 474-499, May.
  43. Zhenyu Mu & Xueshan Ai & Jie Ding & Kui Huang & Senlin Chen & Jiajun Guo & Zuo Dong, 2022. "Risk Analysis of Dynamic Water Level Setting of Reservoir in Flood Season Based on Multi-index," Water Resources Management: An International Journal, Published for the European Water Resources Association (EWRA), Springer;European Water Resources Association (EWRA), vol. 36(9), pages 3067-3086, July.
  44. Yves Breitmoser & Justin Valasek & Justin Mattias Valasek, 2023. "Why Do Committees Work?," CESifo Working Paper Series 10800, CESifo.
  45. Rotheram-Borus, Mary Jane & Tomlinson, Mark & Worthman, Carol M. & Norwood, Peter & le Roux, Ingrid & O'Connor, Mary J., 2023. "Maternal depression, alcohol use, and transient effects of perinatal paraprofessional home visiting in South Africa: Eight-year follow-up of a cluster randomized controlled trial," Social Science & Medicine, Elsevier, vol. 324(C).
  46. repec:jss:jstsof:35:i11 is not listed on IDEAS
  47. Breitmoser, Yves & Valasek, Justin, 2023. "Why do committees work?," Discussion Paper Series in Economics 18/2023, Norwegian School of Economics, Department of Economics.
  48. Amoroso, S., 2013. "Heterogeneity of innovative, collaborative, and productive firm-level processes," Other publications TiSEM f5784a49-7053-401d-855d-1, Tilburg University, School of Economics and Management.
  49. Tuomo Jaakkonen & Sami M. Kivelä & Christoph M. Meier & Jukka T. Forsman, 2015. "The use and relative importance of intraspecific and interspecific social information in a bird community," Behavioral Ecology, International Society for Behavioral Ecology, vol. 26(1), pages 55-64.
  50. Gong, Jing & Wu, Yong-Ping & Li, Li, 2019. "Parameters estimation in Ebola virus transmission dynamics model based on machine learning," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 536(C).
  51. Malcolm Fairbrother, 2016. "Geoengineering, moral hazard, and trust in climate science: evidence from a survey experiment in Britain," Climatic Change, Springer, vol. 139(3), pages 477-489, December.
  52. Sara Amoroso, 2017. "Multilevel heterogeneity of R&D cooperation and innovation determinants," Eurasian Business Review, Springer;Eurasia Business and Economics Society, vol. 7(1), pages 93-120, April.
  53. Jennifer Born & Stefan G Michalski, 2019. "Trait expression and signatures of adaptation in response to nitrogen addition in the common wetland plant Juncus effusus," PLOS ONE, Public Library of Science, vol. 14(1), pages 1-18, January.
  54. Ryan W. Buell & Dennis Campbell & Frances X. Frei, 2021. "The Customer May Not Always Be Right: Customer Compatibility and Service Performance," Management Science, INFORMS, vol. 67(3), pages 1468-1488, March.
  55. Thomas M. Houslay & Alastair J. Wilson, 2017. "Avoiding the misuse of BLUP in behavioural ecology," Behavioral Ecology, International Society for Behavioral Ecology, vol. 28(4), pages 948-952.
  56. Zhang, Zhengzheng & Parker, Richard M. A. & Charlton, Christopher M. J. & Leckie, George & Browne, William J., 2016. "R2MLwiN: A Package to Run MLwiN from within R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 72(i10).
  57. Pajala, Tommi & Korhonen, Pekka & Wallenius, Jyrki, 2017. "Road to robust prediction of choices in deterministic MCDM," European Journal of Operational Research, Elsevier, vol. 259(1), pages 229-235.
  58. Mohamed M. Mostafa, 2016. "Post-materialism, Religiosity, Political Orientation, Locus of Control and Concern for Global Warming: A Multilevel Analysis Across 40 Nations," Social Indicators Research: An International and Interdisciplinary Journal for Quality-of-Life Measurement, Springer, vol. 128(3), pages 1273-1298, September.
  59. Grömping, Ulrike, 2015. "Multilevel Modeling Using R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 62(b01).
  60. Apergis, Nicholas & Aye, Goodness C. & Barros, Carlos Pestana & Gupta, Rangan & Wanke, Peter, 2015. "Energy efficiency of selected OECD countries: A slacks based model with undesirable outputs," Energy Economics, Elsevier, vol. 51(C), pages 45-53.
  61. Fhionna R. Moore & David M. Shuker & Liam Dougherty, 2016. "Stress and sexual signaling: a systematic review and meta-analysis," Behavioral Ecology, International Society for Behavioral Ecology, vol. 27(2), pages 363-371.
  62. Francis K. C. Hui & Samuel Müller & Alan H. Welsh, 2021. "Random Effects Misspecification Can Have Severe Consequences for Random Effects Inference in Linear Mixed Models," International Statistical Review, International Statistical Institute, vol. 89(1), pages 186-206, April.
  63. Alan A Cohen & Emmanuel Milot & Qing Li & Patrick Bergeron & Roxane Poirier & Francis Dusseault-Bélanger & Tamàs Fülöp & Maxime Leroux & Véronique Legault & E Jeffrey Metter & Linda P Fried & Luigi Fe, 2015. "Detection of a Novel, Integrative Aging Process Suggests Complex Physiological Integration," PLOS ONE, Public Library of Science, vol. 10(3), pages 1-26, March.
  64. Michaela D.J. Blyton & David B. Lindenmayer & Sam C. Banks, 2014. "Maternal lineages best explain the associations of a semisocial marsupial," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(5), pages 1212-1222.
  65. Fontana, Magda & Iori, Martina & Nava, Consuelo Rubina, 2017. "Switching Behavior and the Liberalization of the Italian Electricity Retail Market. Logistic and Mixed Effect Bayesian Estimations of Consumer Choice," Department of Economics and Statistics Cognetti de Martiis. Working Papers 201721, University of Turin.
  66. Kirsten E Eilertson & James G Booth & Carlos D Bustamante, 2012. "SnIPRE: Selection Inference Using a Poisson Random Effects Model," PLOS Computational Biology, Public Library of Science, vol. 8(12), pages 1-14, December.
  67. Mirre J P Simons & Alan A Cohen & Simon Verhulst, 2012. "What Does Carotenoid-Dependent Coloration Tell? Plasma Carotenoid Level Signals Immunocompetence and Oxidative Stress State in Birds–A Meta-Analysis," PLOS ONE, Public Library of Science, vol. 7(8), pages 1-1, August.
  68. Alexander Robitzsch, 2021. "A Comprehensive Simulation Study of Estimation Methods for the Rasch Model," Stats, MDPI, vol. 4(4), pages 1-23, October.
  69. Arild Husby & Magne Husby, 2014. "Interspecific analysis of vehicle avoidance behavior in birds," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(3), pages 504-508.
  70. Speidel, Matthias & Drechsler, Jörg & Jolani, Shahab, 2018. "R package hmi: a convenient tool for hierarchical multiple imputation and beyond," IAB-Discussion Paper 201816, Institut für Arbeitsmarkt- und Berufsforschung (IAB), Nürnberg [Institute for Employment Research, Nuremberg, Germany].
  71. Pitchforth, Jegar & Wu, Paul & Fookes, Clinton & Mengersen, Kerrie, 2015. "Processing passengers efficiently: An analysis of airport processing times for international passengers," Journal of Air Transport Management, Elsevier, vol. 49(C), pages 35-45.
  72. Mikhail V Matz & Rachel M Wright & James G Scott, 2013. "No Control Genes Required: Bayesian Analysis of qRT-PCR Data," PLOS ONE, Public Library of Science, vol. 8(8), pages 1-12, August.
  73. Matthew J. Schneider & Sharan Jagpal & Sachin Gupta & Shaobo Li & Yan Yu, 2018. "A Flexible Method for Protecting Marketing Data: An Application to Point-of-Sale Data," Marketing Science, INFORMS, vol. 37(1), pages 153-171, January.
  74. Ingold, Karin & Stadelmann-Steffen, Isabelle & Kammermann, Lorenz, 2019. "The acceptance of instruments in instrument mix situations: Citizens’ perspective on Swiss energy transition," Research Policy, Elsevier, vol. 48(10).
  75. Wanke, Peter & Pestana Barros, Carlos & Chen, Zhongfei, 2015. "An analysis of Asian airlines efficiency with two-stage TOPSIS and MCMC generalized linear mixed models," International Journal of Production Economics, Elsevier, vol. 169(C), pages 110-126.
  76. Bawan Amin & Dómhnall J Jennings & Alison Norman & Andrew Ryan & Vasiliki Ioannidis & Alice Magee & Hayley-Anne Haughey & Amy Haigh & Simone Ciuti, 2022. "Neonate personality affects early-life resource acquisition in a large social mammal [An analysis of vigilance in the Spanish ibex (Capra pyrenaica)]," Behavioral Ecology, International Society for Behavioral Ecology, vol. 33(5), pages 1025-1035.
  77. Nguyen, Minh-Hoang, 2021. "Bayesian analysis in social sciences," OSF Preprints zwdg2, Center for Open Science.
  78. Francisco Palomares & Néstor Fernández & Severine Roques & Cuauhtemoc Chávez & Leandro Silveira & Claudia Keller & Begoña Adrados, 2016. "Fine-Scale Habitat Segregation between Two Ecologically Similar Top Predators," PLOS ONE, Public Library of Science, vol. 11(5), pages 1-16, May.
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