IDEAS home Printed from https://ideas.repec.org/a/eee/phsmap/v536y2019ics037843711931489x.html
   My bibliography  Save this article

Parameters estimation in Ebola virus transmission dynamics model based on machine learning

Author

Listed:
  • Gong, Jing
  • Wu, Yong-Ping
  • Li, Li

Abstract

This paper presents the application of machine learning to parameter estimation in bio-mathematical model. The background of Ebola disease was introduced, including the structure and morphology of the virus, the causes of disease, the mode of transmission, prevention and control measures. Meanwhile, it is essential to present the mechanism of this method, the application and calculation process, and the parameters. Compared with other methods, this method can not only obtain more accurate parameter values based on fewer and scattered data, but also estimate the parameters appearing anywhere in the partial differential equation, and automatically filter arbitrary noise data through Gaussian priori hypothesis.

Suggested Citation

  • Gong, Jing & Wu, Yong-Ping & Li, Li, 2019. "Parameters estimation in Ebola virus transmission dynamics model based on machine learning," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 536(C).
  • Handle: RePEc:eee:phsmap:v:536:y:2019:i:c:s037843711931489x
    DOI: 10.1016/j.physa.2019.122604
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S037843711931489X
    Download Restriction: Full text for ScienceDirect subscribers only. Journal offers the option of making the article available online on Science direct for a fee of $3,000

    File URL: https://libkey.io/10.1016/j.physa.2019.122604?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Hadfield, Jarrod D., 2010. "MCMC Methods for Multi-Response Generalized Linear Mixed Models: The MCMCglmm R Package," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 33(i02).
    2. Li, Li, 2017. "Transmission dynamics of Ebola virus disease with human mobility in Sierra Leone," Chaos, Solitons & Fractals, Elsevier, vol. 104(C), pages 575-579.
    3. Li, Li & Zhang, Jie & Liu, Chen & Zhang, Hong-Tao & Wang, Yi & Wang, Zhen, 2019. "Analysis of transmission dynamics for Zika virus on networks," Applied Mathematics and Computation, Elsevier, vol. 347(C), pages 566-577.
    4. Zhang, Hai-Feng & Shu, Pan-Pan & Wang, Zhen & Tang, Ming & Small, Michael, 2017. "Preferential imitation can invalidate targeted subsidy policies on seasonal-influenza diseases," Applied Mathematics and Computation, Elsevier, vol. 294(C), pages 332-342.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Wolfgang Goymann & John C. Wingfield, 2014. "Male-to-female testosterone ratios, dimorphism, and life history—what does it really tell us?," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(4), pages 685-699.
    2. I. Albarrán & P. Alonso-González & J. M. Marin, 2017. "Some criticism to a general model in Solvency II: an explanation from a clustering point of view," Empirical Economics, Springer, vol. 52(4), pages 1289-1308, June.
    3. Wang, Jin-Shan & Wu, Yong-Ping & Li, Li & Sun, Gui-Quan, 2020. "Effect of mobility and predator switching on the dynamical behavior of a predator-prey model," Chaos, Solitons & Fractals, Elsevier, vol. 132(C).
    4. Andrés López-Sepulcre & Sebastiano De Bona & Janne K. Valkonen & Kate D.L. Umbers & Johanna Mappes, 2015. "Item Response Trees: a recommended method for analyzing categorical data in behavioral studies," Behavioral Ecology, International Society for Behavioral Ecology, vol. 26(5), pages 1268-1273.
    5. Jesse Shore & Ethan Bernstein & David Lazer, 2014. "Facts and Figuring: An Experimental Investigation of Network Structure and Performance in Information and Solution Spaces," Harvard Business School Working Papers 14-075, Harvard Business School, revised Jun 2014.
    6. Weliton Menário & Wendy J King & Timothée Bonnet & Marco Festa-Bianchet & Loeske E B Kruuk, 2023. "Early-life behavior, survival, and maternal personality in a wild marsupial," Behavioral Ecology, International Society for Behavioral Ecology, vol. 34(6), pages 1002-1012.
    7. Bakar, Khandoker Shuvo & Sahu, Sujit K., 2015. "spTimer: Spatio-Temporal Bayesian Modeling Using R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 63(i15).
    8. Parady, Giancarlos & Frei, Andreas & Kowald, Matthias & Guidon, Sergio & Wicki, Michael & van den Berg, Pauline & Carrasco, Juan-Antonio & Arentze, Theo & Timmermans, Harry & Wellman, Barry & Takami, , 2021. "A comparative study of social interaction frequencies among social network members in five countries," Journal of Transport Geography, Elsevier, vol. 90(C).
    9. Amoroso, S., 2013. "Heterogeneity of innovative, collaborative, and productive firm-level processes," Other publications TiSEM f5784a49-7053-401d-855d-1, Tilburg University, School of Economics and Management.
    10. Apergis, Nicholas & Aye, Goodness C. & Barros, Carlos Pestana & Gupta, Rangan & Wanke, Peter, 2015. "Energy efficiency of selected OECD countries: A slacks based model with undesirable outputs," Energy Economics, Elsevier, vol. 51(C), pages 45-53.
    11. Francis K. C. Hui & Samuel Müller & Alan H. Welsh, 2021. "Random Effects Misspecification Can Have Severe Consequences for Random Effects Inference in Linear Mixed Models," International Statistical Review, International Statistical Institute, vol. 89(1), pages 186-206, April.
    12. Mikhail V Matz & Rachel M Wright & James G Scott, 2013. "No Control Genes Required: Bayesian Analysis of qRT-PCR Data," PLOS ONE, Public Library of Science, vol. 8(8), pages 1-12, August.
    13. Saeede Ajorlou & Issac Shams & Kai Yang, 2015. "An analytics approach to designing patient centered medical homes," Health Care Management Science, Springer, vol. 18(1), pages 3-18, March.
    14. Kandt, Jens & Leak, Alistair, 2019. "Examining inclusive mobility through smartcard data: What shall we make of senior citizens' declining bus patronage in the West Midlands?," Journal of Transport Geography, Elsevier, vol. 79(C), pages 1-1.
    15. Hart, Jordan D. A. & Franks, Daniel Wayne & Brent, Lauren & Weiss, Michael N., 2022. "bisonR - Bayesian Inference of Social Networks with R," OSF Preprints ywu7j, Center for Open Science.
    16. Lenth, Russell V., 2016. "Least-Squares Means: The R Package lsmeans," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 69(i01).
    17. Breitmoser, Yves & Valasek, Justin, 2023. "Why do committees work?," Discussion Paper Series in Economics 18/2023, Norwegian School of Economics, Department of Economics.
    18. Guo, Zun-Guang & Sun, Gui-Quan & Wang, Zhen & Jin, Zhen & Li, Li & Li, Can, 2020. "Spatial dynamics of an epidemic model with nonlocal infection," Applied Mathematics and Computation, Elsevier, vol. 377(C).
    19. Tuomo Jaakkonen & Sami M. Kivelä & Christoph M. Meier & Jukka T. Forsman, 2015. "The use and relative importance of intraspecific and interspecific social information in a bird community," Behavioral Ecology, International Society for Behavioral Ecology, vol. 26(1), pages 55-64.
    20. Mohamed M. Mostafa, 2016. "Post-materialism, Religiosity, Political Orientation, Locus of Control and Concern for Global Warming: A Multilevel Analysis Across 40 Nations," Social Indicators Research: An International and Interdisciplinary Journal for Quality-of-Life Measurement, Springer, vol. 128(3), pages 1273-1298, September.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:phsmap:v:536:y:2019:i:c:s037843711931489x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/physica-a-statistical-mechpplications/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.