Most probable dynamics of a genetic regulatory network under stable Lévy noise
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DOI: 10.1016/j.amc.2018.12.005
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- Gao, Ting & Duan, Jinqiao & Li, Xiaofan, 2016. "Fokker–Planck equations for stochastic dynamical systems with symmetric Lévy motions," Applied Mathematics and Computation, Elsevier, vol. 278(C), pages 1-20.
- David M Holloway & Alexander V Spirov, 2017. "Transcriptional bursting in Drosophila development: Stochastic dynamics of eve stripe 2 expression," PLOS ONE, Public Library of Science, vol. 12(4), pages 1-24, April.
- Niraj Kumar & Abhyudai Singh & Rahul V Kulkarni, 2015. "Transcriptional Bursting in Gene Expression: Analytical Results for General Stochastic Models," PLOS Computational Biology, Public Library of Science, vol. 11(10), pages 1-22, October.
- Gürol M. Süel & Jordi Garcia-Ojalvo & Louisa M. Liberman & Michael B. Elowitz, 2006. "An excitable gene regulatory circuit induces transient cellular differentiation," Nature, Nature, vol. 440(7083), pages 545-550, March.
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Cited by:
- Han, Ping & Xu, Wei & Wang, Liang & Zhang, Hongxia & Ma, Shichao, 2020. "Most probable dynamics of the tumor growth model with immune surveillance under cross-correlated noises," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 547(C).
- Han, Ping & Xu, Wei & Wang, Liang & Ma, Shichao, 2020. "The most probable response of some prototypical stochastic nonlinear dynamical systems," Chaos, Solitons & Fractals, Elsevier, vol. 132(C).
- Song, Yi & Xu, Wei & Wei, Wei & Niu, Lizhi, 2023. "Dynamical transition of phenotypic states in breast cancer system with Lévy noise," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 627(C).
- Han, Ping & Wang, Liang & Xu, Wei & Zhang, Hongxia & Ren, Zhicong, 2021. "The stochastic P-bifurcation analysis of the impact system via the most probable response," Chaos, Solitons & Fractals, Elsevier, vol. 144(C).
- Yang, Anji & Wang, Hao & Yuan, Sanling, 2023. "Tipping time in a stochastic Leslie predator–prey model," Chaos, Solitons & Fractals, Elsevier, vol. 171(C).
- Han, Ping & Xu, Wei & Zhang, Hongxia & Wang, Liang, 2022. "Most probable trajectories in the delayed tumor growth model excited by a multiplicative non-Gaussian noise," Chaos, Solitons & Fractals, Elsevier, vol. 156(C).
- Song, Yi & Xu, Wei, 2021. "Asymmetric Lévy noise changed stability in a gene transcriptional regulatory system," Chaos, Solitons & Fractals, Elsevier, vol. 151(C).
- Hao, Mengli & Jia, Wantao & Wang, Liang & Li, Fuxiao, 2022. "Most probable trajectory of a tumor model with immune response subjected to asymmetric Lévy noise," Chaos, Solitons & Fractals, Elsevier, vol. 165(P1).
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Keywords
Nonlocal Fokker–Planck equation; Most probable trajectories; Gene regulation; Non-Gaussian stochastic dynamics; Lévy noise;All these keywords.
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