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A new approach to modeling the cure rate in the presence of interval censored data

Author

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  • Suvra Pal

    (University of Texas at Arlington)

  • Yingwei Peng

    (Queen’s University)

  • Wisdom Aselisewine

    (University of Texas at Arlington)

Abstract

We consider interval censored data with a cured subgroup that arises from longitudinal followup studies with a heterogeneous population where a certain proportion of subjects is not susceptible to the event of interest. We propose a two component mixture cure model, where the first component describing the probability of cure is modeled by a support vector machine-based approach and the second component describing the survival distribution of the uncured group is modeled by a proportional hazard structure. Our proposed model provides flexibility in capturing complex effects of covariates on the probability of cure unlike the traditional models that rely on modeling the cure probability using a generalized linear model with a known link function. For the estimation of model parameters, we develop an expectation maximization-based estimation algorithm. We conduct simulation studies and show that our proposed model performs better in capturing complex effects of covariates on the cure probability when compared to the traditional logit link-based two component mixture cure model. This results in more accurate (smaller bias) and precise (smaller mean square error) estimates of the cure probabilities, which in-turn improves the predictive accuracy of the latent cured status. We further show that our model’s ability to capture complex covariate effects also improves the estimation results corresponding to the survival distribution of the uncured. Finally, we apply the proposed model and estimation procedure to an interval censored data on smoking cessation.

Suggested Citation

  • Suvra Pal & Yingwei Peng & Wisdom Aselisewine, 2024. "A new approach to modeling the cure rate in the presence of interval censored data," Computational Statistics, Springer, vol. 39(5), pages 2743-2769, July.
  • Handle: RePEc:spr:compst:v:39:y:2024:i:5:d:10.1007_s00180-023-01389-7
    DOI: 10.1007/s00180-023-01389-7
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    References listed on IDEAS

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    1. Wenbin Lu, 2004. "On semiparametric transformation cure models," Biometrika, Biometrika Trust, vol. 91(2), pages 331-343, June.
    2. Katherine Davies & Suvra Pal & Joynob A. Siddiqua, 2021. "Stochastic EM algorithm for generalized exponential cure rate model and an empirical study," Journal of Applied Statistics, Taylor & Francis Journals, vol. 48(12), pages 2112-2135, September.
    3. N. Balakrishnan & Suvra Pal, 2015. "An EM algorithm for the estimation of parameters of a flexible cure rate model with generalized gamma lifetime and model discrimination using likelihood- and information-based methods," Computational Statistics, Springer, vol. 30(1), pages 151-189, March.
    4. Sandip Barui & Grace Y. Yi, 2020. "Semiparametric methods for survival data with measurement error under additive hazards cure rate models," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 26(3), pages 421-450, July.
    5. Yingwei Peng & Keith B. G. Dear, 2000. "A Nonparametric Mixture Model for Cure Rate Estimation," Biometrics, The International Biometric Society, vol. 56(1), pages 237-243, March.
    6. Balakrishnan, N. & Pal, Suvra, 2013. "Lognormal lifetimes and likelihood-based inference for flexible cure rate models based on COM-Poisson family," Computational Statistics & Data Analysis, Elsevier, vol. 67(C), pages 41-67.
    7. Judy P. Sy & Jeremy M. G. Taylor, 2000. "Estimation in a Cox Proportional Hazards Cure Model," Biometrics, The International Biometric Society, vol. 56(1), pages 227-236, March.
    8. Peizhi Li & Yingwei Peng & Ping Jiang & Qingli Dong, 2020. "A support vector machine based semiparametric mixture cure model," Computational Statistics, Springer, vol. 35(3), pages 931-945, September.
    9. Peng, Yingwei, 2003. "Fitting semiparametric cure models," Computational Statistics & Data Analysis, Elsevier, vol. 41(3-4), pages 481-490, January.
    10. Piyachart Wiangnak & Suvra Pal, 2018. "Gamma lifetimes and associated inference for interval-censored cure rate model with COM–Poisson competing cause," Communications in Statistics - Theory and Methods, Taylor & Francis Journals, vol. 47(6), pages 1491-1509, March.
    11. N. Balakrishnan & Suvra Pal, 2015. "Likelihood Inference for Flexible Cure Rate Models with Gamma Lifetimes," Communications in Statistics - Theory and Methods, Taylor & Francis Journals, vol. 44(19), pages 4007-4048, October.
    12. N. Balakrishnan & M. V. Koutras & F. S. Milienos & S. Pal, 2016. "Piecewise Linear Approximations for Cure Rate Models and Associated Inferential Issues," Methodology and Computing in Applied Probability, Springer, vol. 18(4), pages 937-966, December.
    13. Mao, Meng & Wang, Jane-Ling, 2010. "Semiparametric Efficient Estimation for a Class of Generalized Proportional Odds Cure Models," Journal of the American Statistical Association, American Statistical Association, vol. 105(489), pages 302-311.
    14. Lopez-Cheda, Ana & Cao, Ricardo & Jacome, Amalia & Van Keilegom, Ingrid, 2017. "Nonparametric incidence estimation and bootstrap bandwidth selection in mixture cure models," LIDAM Reprints ISBA 2017001, Université catholique de Louvain, Institute of Statistics, Biostatistics and Actuarial Sciences (ISBA).
    15. Suvra Pal & Jacob Majakwara & N. Balakrishnan, 2018. "An EM algorithm for the destructive COM-Poisson regression cure rate model," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 81(2), pages 143-171, February.
    16. Yuanshan Wu & Guosheng Yin, 2013. "Cure Rate Quantile Regression for Censored Data With a Survival Fraction," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 108(504), pages 1517-1531, December.
    17. López-Cheda, Ana & Cao, Ricardo & Jácome, M. Amalia & Van Keilegom, Ingrid, 2017. "Nonparametric incidence estimation and bootstrap bandwidth selection in mixture cure models," Computational Statistics & Data Analysis, Elsevier, vol. 105(C), pages 144-165.
    18. Tong, Edward N.C. & Mues, Christophe & Thomas, Lyn C., 2012. "Mixture cure models in credit scoring: If and when borrowers default," European Journal of Operational Research, Elsevier, vol. 218(1), pages 132-139.
    19. Suvra Pal & Souvik Roy, 2021. "On the estimation of destructive cure rate model: A new study with exponentially weighted Poisson competing risks," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 75(3), pages 324-342, August.
    20. Suvra Pal & N. Balakrishnan, 2017. "Likelihood inference for the destructive exponentially weighted Poisson cure rate model with Weibull lifetime and an application to melanoma data," Computational Statistics, Springer, vol. 32(2), pages 429-449, June.
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