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Soluble and multivalent Jag1 DNA origami nanopatterns activate Notch without pulling force

Author

Listed:
  • Ioanna Smyrlaki

    (Karolinska Institutet)

  • Ferenc Fördős

    (Karolinska Institutet)

  • Iris Rocamonde-Lago

    (Karolinska Institutet)

  • Yang Wang

    (Karolinska Institutet)

  • Boxuan Shen

    (Karolinska Institutet
    Aalto University)

  • Antonio Lentini

    (Karolinska Institutet)

  • Vincent C. Luca

    (Moffitt Cancer Center)

  • Björn Reinius

    (Karolinska Institutet)

  • Ana I. Teixeira

    (Karolinska Institutet)

  • Björn Högberg

    (Karolinska Institutet)

Abstract

The Notch signaling pathway has fundamental roles in embryonic development and in the nervous system. The current model of receptor activation involves initiation via a force-induced conformational change. Here, we define conditions that reveal pulling force-independent Notch activation using soluble multivalent constructs. We treat neuroepithelial stem-like cells with molecularly precise ligand nanopatterns displayed from solution using DNA origami. Notch signaling follows with clusters of Jag1, and with chimeric structures where most Jag1 proteins are replaced by other binders not targeting Notch. Our data rule out several confounding factors and suggest a model where Jag1 activates Notch upon prolonged binding without appearing to need a pulling force. These findings reveal a distinct mode of activation of Notch and lay the foundation for the development of soluble agonists.

Suggested Citation

  • Ioanna Smyrlaki & Ferenc Fördős & Iris Rocamonde-Lago & Yang Wang & Boxuan Shen & Antonio Lentini & Vincent C. Luca & Björn Reinius & Ana I. Teixeira & Björn Högberg, 2024. "Soluble and multivalent Jag1 DNA origami nanopatterns activate Notch without pulling force," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-023-44059-4
    DOI: 10.1038/s41467-023-44059-4
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    References listed on IDEAS

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    1. Bernard Yurke & Andrew J. Turberfield & Allen P. Mills & Friedrich C. Simmel & Jennifer L. Neumann, 2000. "A DNA-fuelled molecular machine made of DNA," Nature, Nature, vol. 406(6796), pages 605-608, August.
    2. Ashton C. Trotman-Grant & Mahmood Mohtashami & Joshua Sousa Casal & Elisa C. Martinez & Dylan Lee & Sintia Teichman & Patrick M. Brauer & Jianxun Han & Michele K. Anderson & Juan Carlos Zúñiga-Pflücke, 2021. "DL4-μbeads induce T cell lineage differentiation from stem cells in a stromal cell-free system," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
    3. Eric H. Schroeter & Jeffrey A. Kisslinger & Raphael Kopan, 1998. "Notch-1 signalling requires ligand-induced proteolytic release of intracellular domain," Nature, Nature, vol. 393(6683), pages 382-386, May.
    4. Shawn M. Douglas & Hendrik Dietz & Tim Liedl & Björn Högberg & Franziska Graf & William M. Shih, 2009. "Self-assembly of DNA into nanoscale three-dimensional shapes," Nature, Nature, vol. 459(7245), pages 414-418, May.
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