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Synaptic basis of a sub-second representation of time in a neural circuit model

Author

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  • A. Barri

    (Université Paris Cité, Synapse and Circuit Dynamics Laboratory)

  • M. T. Wiechert

    (Université Paris Cité, Synapse and Circuit Dynamics Laboratory)

  • M. Jazayeri

    (Massachusetts Institute of Technology
    Massachusetts Institute of Technology)

  • D. A. DiGregorio

    (Université Paris Cité, Synapse and Circuit Dynamics Laboratory)

Abstract

Temporal sequences of neural activity are essential for driving well-timed behaviors, but the underlying cellular and circuit mechanisms remain elusive. We leveraged the well-defined architecture of the cerebellum, a brain region known to support temporally precise actions, to explore theoretically whether the experimentally observed diversity of short-term synaptic plasticity (STP) at the input layer could generate neural dynamics sufficient for sub-second temporal learning. A cerebellar circuit model equipped with dynamic synapses produced a diverse set of transient granule cell firing patterns that provided a temporal basis set for learning precisely timed pauses in Purkinje cell activity during simulated delay eyelid conditioning and Bayesian interval estimation. The learning performance across time intervals was influenced by the temporal bandwidth of the temporal basis, which was determined by the input layer synaptic properties. The ubiquity of STP throughout the brain positions it as a general, tunable cellular mechanism for sculpting neural dynamics and fine-tuning behavior.

Suggested Citation

  • A. Barri & M. T. Wiechert & M. Jazayeri & D. A. DiGregorio, 2022. "Synaptic basis of a sub-second representation of time in a neural circuit model," Nature Communications, Nature, vol. 13(1), pages 1-18, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-35395-y
    DOI: 10.1038/s41467-022-35395-y
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    1. Zhenyu Gao & Courtney Davis & Alyse M. Thomas & Michael N. Economo & Amada M. Abrego & Karel Svoboda & Chris I. Zeeuw & Nuo Li, 2018. "A cortico-cerebellar loop for motor planning," Nature, Nature, vol. 563(7729), pages 113-116, November.
    2. Chong Guo & Vincent Huson & Evan Z. Macosko & Wade G. Regehr, 2021. "Graded heterogeneity of metabotropic signaling underlies a continuum of cell-intrinsic temporal responses in unipolar brush cells," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
    3. Chiara Saviane & R. Angus Silver, 2006. "Fast vesicle reloading and a large pool sustain high bandwidth transmission at a central synapse," Nature, Nature, vol. 439(7079), pages 983-987, February.
    4. Susu Chen & George J. Augustine & Paul Chadderton, 2017. "Serial processing of kinematic signals by cerebellar circuitry during voluntary whisking," Nature Communications, Nature, vol. 8(1), pages 1-13, December.
    5. Gabriel D Puccini & Maria V Sanchez-Vives & Albert Compte, 2007. "Integrated Mechanisms of Anticipation and Rate-of-Change Computations in Cortical Circuits," PLOS Computational Biology, Public Library of Science, vol. 3(5), pages 1-13, May.
    6. Jason S. Rothman & Laurence Cathala & Volker Steuber & R. Angus Silver, 2009. "Synaptic depression enables neuronal gain control," Nature, Nature, vol. 457(7232), pages 1015-1018, February.
    7. Devika Narain & Evan D. Remington & Chris I. De Zeeuw & Mehrdad Jazayeri, 2018. "A cerebellar mechanism for learning prior distributions of time intervals," Nature Communications, Nature, vol. 9(1), pages 1-12, December.
    8. N. Alex Cayco-Gajic & Claudia Clopath & R. Angus Silver, 2017. "Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks," Nature Communications, Nature, vol. 8(1), pages 1-11, December.
    9. Britton A. Sauerbrei & Jian-Zhong Guo & Jeremy D. Cohen & Matteo Mischiati & Wendy Guo & Mayank Kabra & Nakul Verma & Brett Mensh & Kristin Branson & Adam W. Hantman, 2020. "Cortical pattern generation during dexterous movement is input-driven," Nature, Nature, vol. 577(7790), pages 386-391, January.
    10. Michael A. Long & Dezhe Z. Jin & Michale S. Fee, 2010. "Support for a synaptic chain model of neuronal sequence generation," Nature, Nature, vol. 468(7322), pages 394-399, November.
    11. L. F. Abbott & Wade G. Regehr, 2004. "Synaptic computation," Nature, Nature, vol. 431(7010), pages 796-803, October.
    12. Christopher D. Harvey & Philip Coen & David W. Tank, 2012. "Choice-specific sequences in parietal cortex during a virtual-navigation decision task," Nature, Nature, vol. 484(7392), pages 62-68, April.
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    1. Chris. I. De Zeeuw & Julius Koppen & George. G. Bregman & Marit Runge & Devika Narain, 2023. "Heterogeneous encoding of temporal stimuli in the cerebellar cortex," Nature Communications, Nature, vol. 14(1), pages 1-10, December.

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