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MAD2L2 promotes replication fork protection and recovery in a shieldin-independent and REV3L-dependent manner

Author

Listed:
  • Inés Paniagua

    (The Netherlands Cancer Institute)

  • Zainab Tayeh

    (The Netherlands Cancer Institute)

  • Mattia Falcone

    (The Netherlands Cancer Institute)

  • Santiago Hernández Pérez

    (The Netherlands Cancer Institute)

  • Aurora Cerutti

    (The Netherlands Cancer Institute)

  • Jacqueline J. L. Jacobs

    (The Netherlands Cancer Institute)

Abstract

Protection of stalled replication forks is essential to prevent genome instability, a major driving force of tumorigenesis. Several key regulators of DNA double-stranded break (DSB) repair, including 53BP1 and RIF1, have been implicated in fork protection. MAD2L2, also known as REV7, plays an important role downstream of 53BP1/RIF1 by counteracting resection at DSBs in the recently discovered shieldin complex. The ability to bind and counteract resection at exposed DNA ends at DSBs makes MAD2L2/shieldin a prime candidate for also suppressing nucleolytic processing at stalled replication forks. However, the function of MAD2L2/shieldin outside of DNA repair is unknown. Here we address this by using genetic and single-molecule analyses and find that MAD2L2 is required for protecting and restarting stalled replication forks. MAD2L2 loss leads to uncontrolled MRE11-dependent resection of stalled forks and single-stranded DNA accumulation, which causes irreparable genomic damage. Unexpectedly, MAD2L2 limits resection at stalled forks independently of shieldin, since fork protection remained unaffected by shieldin loss. Instead, MAD2L2 cooperates with the DNA polymerases REV3L and REV1 to promote fork stability. Thus, MAD2L2 suppresses aberrant nucleolytic processing both at DSBs and stalled replication forks by differentially engaging shieldin and REV1/REV3L, respectively.

Suggested Citation

  • Inés Paniagua & Zainab Tayeh & Mattia Falcone & Santiago Hernández Pérez & Aurora Cerutti & Jacqueline J. L. Jacobs, 2022. "MAD2L2 promotes replication fork protection and recovery in a shieldin-independent and REV3L-dependent manner," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-32861-5
    DOI: 10.1038/s41467-022-32861-5
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    1. Sofija Mijic & Ralph Zellweger & Nagaraja Chappidi & Matteo Berti & Kurt Jacobs & Karun Mutreja & Sebastian Ursich & Arnab Ray Chaudhuri & Andre Nussenzweig & Pavel Janscak & Massimo Lopes, 2017. "Replication fork reversal triggers fork degradation in BRCA2-defective cells," Nature Communications, Nature, vol. 8(1), pages 1-11, December.
    2. Vera Boersma & Nathalie Moatti & Sandra Segura-Bayona & Marieke H. Peuscher & Jaco van der Torre & Brigitte A. Wevers & Alexandre Orthwein & Daniel Durocher & Jacqueline J. L. Jacobs, 2015. "MAD2L2 controls DNA repair at telomeres and DNA breaks by inhibiting 5′ end resection," Nature, Nature, vol. 521(7553), pages 537-540, May.
    3. Shengxian Gao & Sumin Feng & Shaokai Ning & Jingyan Liu & Huayu Zhao & Yixi Xu & Jinfeng Shang & Kejiao Li & Qing Li & Rong Guo & Dongyi Xu, 2018. "An OB-fold complex controls the repair pathways for DNA double-strand breaks," Nature Communications, Nature, vol. 9(1), pages 1-10, December.
    4. Michal Zimmermann & Olga Murina & Martin A. M. Reijns & Angelo Agathanggelou & Rachel Challis & Žygimantė Tarnauskaitė & Morwenna Muir & Adeline Fluteau & Michael Aregger & Andrea McEwan & Wei Yuan & , 2018. "CRISPR screens identify genomic ribonucleotides as a source of PARP-trapping lesions," Nature, Nature, vol. 559(7713), pages 285-289, July.
    5. Chirantani Mukherjee & Vivek Tripathi & Eleni Maria Manolika & Anne Margriet Heijink & Giulia Ricci & Sarra Merzouk & H. Rudolf Boer & Jeroen Demmers & Marcel A. T. M. Vugt & Arnab Ray Chaudhuri, 2019. "RIF1 promotes replication fork protection and efficient restart to maintain genome stability," Nature Communications, Nature, vol. 10(1), pages 1-16, December.
    6. Arnab Ray Chaudhuri & Elsa Callen & Xia Ding & Ewa Gogola & Alexandra A. Duarte & Ji-Eun Lee & Nancy Wong & Vanessa Lafarga & Jennifer A. Calvo & Nicholas J. Panzarino & Sam John & Amanda Day & Anna V, 2016. "Replication fork stability confers chemoresistance in BRCA-deficient cells," Nature, Nature, vol. 535(7612), pages 382-387, July.
    7. Guotai Xu & J. Ross Chapman & Inger Brandsma & Jingsong Yuan & Martin Mistrik & Peter Bouwman & Jirina Bartkova & Ewa Gogola & Daniël Warmerdam & Marco Barazas & Janneke E. Jaspers & Kenji Watanabe & , 2015. "REV7 counteracts DNA double-strand break resection and affects PARP inhibition," Nature, Nature, vol. 521(7553), pages 541-544, May.
    8. Joost Schimmel & Núria Muñoz-Subirana & Hanneke Kool & Robin Schendel & Marcel Tijsterman, 2021. "Small tandem DNA duplications result from CST-guided Pol α-primase action at DNA break termini," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
    9. Sylvie M. Noordermeer & Salomé Adam & Dheva Setiaputra & Marco Barazas & Stephen J. Pettitt & Alexanda K. Ling & Michele Olivieri & Alejandro Álvarez-Quilón & Nathalie Moatti & Michal Zimmermann & Ste, 2018. "The shieldin complex mediates 53BP1-dependent DNA repair," Nature, Nature, vol. 560(7716), pages 117-121, August.
    10. Arnab Ray Chaudhuri & Elsa Callen & Xia Ding & Ewa Gogola & Alexandra A. Duarte & Ji-Eun Lee & Nancy Wong & Vanessa Lafarga & Jennifer A. Calvo & Nicholas J. Panzarino & Sam John & Amanda Day & Anna V, 2016. "Erratum: Replication fork stability confers chemoresistance in BRCA-deficient cells," Nature, Nature, vol. 539(7629), pages 456-456, November.
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