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DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases

Author

Listed:
  • Matthias Wielscher

    (School of Public Health, Imperial College London
    Medical University of Vienna)

  • Pooja R. Mandaviya

    (Erasmus University Medical Center
    Maastricht University)

  • Brigitte Kuehnel

    (Helmholtz Zentrum München, German Research Center for Environmental Health)

  • Roby Joehanes

    (Framingham Heart Study
    National Institutes of Health)

  • Rima Mustafa

    (School of Public Health, Imperial College London)

  • Oliver Robinson

    (School of Public Health, Imperial College London)

  • Yan Zhang

    (German Cancer Research Center)

  • Barbara Bodinier

    (School of Public Health, Imperial College London)

  • Esther Walton

    (University of Bath
    Bristol Medical School, University of Bristol)

  • Pashupati P. Mishra

    (Tampere University
    Tampere University
    Fimlab Laboratories)

  • Pascal Schlosser

    (Faculty of Medicine and Medical Center - University of Freiburg)

  • Rory Wilson

    (Helmholtz Zentrum München, German Research Center for Environmental Health)

  • Pei-Chien Tsai

    (King’s College London
    Chang Gung University)

  • Saranya Palaniswamy

    (School of Public Health, Imperial College London
    University of Oulu, Pentti Kaiteran katu 1, Linnanmaa)

  • Riccardo E. Marioni

    (University of Edinburgh)

  • Giovanni Fiorito

    (University of Sassari
    Imperial College London)

  • Giovanni Cugliari

    (Fondazione IRCCS Istituto Nazionale dei Tumori)

  • Ville Karhunen

    (School of Public Health, Imperial College London)

  • Mohsen Ghanbari

    (Erasmus MC University Medical Center
    Mashhad University of Medical Sciences)

  • Bruce M. Psaty

    (University of Washington
    University of Washington
    University of Washington)

  • Marie Loh

    (School of Public Health, Imperial College London
    Lee Kong Chian School of Medicine)

  • Joshua C. Bis

    (University of Washington)

  • Benjamin Lehne

    (School of Public Health, Imperial College London)

  • Nona Sotoodehnia

    (University of Washington)

  • Ian J. Deary

    (University of Edinburgh)

  • Marc Chadeau-Hyam

    (School of Public Health, Imperial College London)

  • Jennifer A. Brody

    (University of Washington)

  • Alexia Cardona

    (University of Cambridge)

  • Elizabeth Selvin

    (Johns Hopkins Bloomberg School of Public Health
    Johns Hopkins Bloomberg School of Public Health)

  • Alicia K. Smith

    (Emory University School of Medicine)

  • Andrew H. Miller

    (Emory University School of Medicine)

  • Mylin A. Torres

    (Winship Cancer Institute, Emory University School of Medicine)

  • Eirini Marouli

    (Queen Mary University of London)

  • Xin Gào

    (German Cancer Research Center)

  • Joyce B. J. Meurs

    (Erasmus University Medical Center)

  • Johanna Graf-Schindler

    (Helmholtz Zentrum München, German Research Center for Environmental Health)

  • Wolfgang Rathmann

    (German Diabetes Center, Leibniz Center for Diabetes Resesarch at Heinrich Heine University Düsseldorf)

  • Wolfgang Koenig

    (Technische Universität München
    Partner Site Munich Heart Alliance
    University of Ulm)

  • Annette Peters

    (Helmholtz Zentrum München, German Research Center for Environmental Health
    Partner Site Munich Heart Alliance)

  • Wolfgang Weninger

    (Medical University of Vienna)

  • Matthias Farlik

    (Medical University of Vienna)

  • Tao Zhang

    (Shandong University)

  • Wei Chen

    (Tulane University)

  • Yujing Xia

    (King’s College London)

  • Alexander Teumer

    (University Medicine Greifswald
    Partner Site Greifswald)

  • Matthias Nauck

    (Partner Site Greifswald
    University Medicine Greifswald)

  • Hans J. Grabe

    (University Medicine Greifswald)

  • Macus Doerr

    (Partner Site Greifswald
    University Medicine Greifswald)

  • Terho Lehtimäki

    (Tampere University
    Tampere University
    Fimlab Laboratories)

  • Weihua Guan

    (University of Minnesota)

  • Lili Milani

    (University of Tartu)

  • Toshiko Tanaka

    (National Institute on Aging, National Institutes of Health)

  • Krista Fisher

    (University of Tartu
    University of Tartu)

  • Lindsay L. Waite

    (HudsonAlpha Institute for Biotechnology)

  • Silva Kasela

    (University of Tartu)

  • Paolo Vineis

    (School of Public Health, Imperial College London
    Imperial College London)

  • Niek Verweij

    (University of Groningen, University Medical Center Groningen, Hanzeplein 1)

  • Pim Harst

    (Division of Heart and Lungs, University Medical Center Utrecht)

  • Licia Iacoviello

    (IRCCS NEUROMED
    University of Insubria)

  • Carlotta Sacerdote

    (Citta’ della Salute e della Scienza Hospital and Centre for Cancer Prevention)

  • Salvatore Panico

    (Dipartimento di Medicina Clinica e Chirurgia Federico II University)

  • Vittorio Krogh

    (Fondazione IRCCS Istituto Nazionale dei Tumori)

  • Rosario Tumino

    (“Civic - MPP Arezzo” Hospital, ASP Ragusa)

  • Evangelia Tzala

    (School of Public Health, Imperial College London)

  • Giuseppe Matullo

    (University of Turin
    AOU Città della Salute e della Scienza di Torino)

  • Mikko A. Hurme

    (Tampere University)

  • Olli T. Raitakari

    (University of Turku
    Turku University Hospital
    University of Turku and Turku University Hospital)

  • Elena Colicino

    (Icahn School of Medicine at Mount Sinai)

  • Andrea A. Baccarelli

    (Columbia University Mailman School of Public Health)

  • Mika Kähönen

    (Tampere University
    Tampere University Hospital)

  • Karl-Heinz Herzig

    (University of Oulu, and Oulu University Hospital
    Poznan University of Medical Sciences)

  • Shengxu Li

    (Children’s Minnesota)

  • Karen N. Conneely

    (Emory University School of Medicine)

  • Jaspal S. Kooner

    (National Heart and Lung Institute, Imperial College London
    Ealing Hospital, London North West Healthcare NHS Trust)

  • Anna Köttgen

    (Faculty of Medicine and Medical Center - University of Freiburg
    Johns Hopkins Bloomberg School of Public Health)

  • Bastiaan T. Heijmans

    (Leiden University Medical Center)

  • Panos Deloukas

    (Queen Mary University of London)

  • Caroline Relton

    (Bristol Medical School, University of Bristol)

  • Ken K. Ong

    (University of Cambridge)

  • Jordana T. Bell

    (King’s College London)

  • Eric Boerwinkle

    (University of Texas Health Science Center at Houston
    Human Genome Sequencing Center, Baylor College of Medicine, Houston)

  • Paul Elliott

    (School of Public Health, Imperial College London
    School of Public Health, Imperial College London
    Imperial Biomedical Research Centre, Imperial College London
    British Heart Foundation, BHF, Centre for Research Excellence, Imperial College London)

  • Hermann Brenner

    (German Cancer Research Center
    Heidelberg University)

  • Marian Beekman

    (Leiden University Medical Center)

  • Daniel Levy

    (Framingham Heart Study
    National Institutes of Health)

  • Melanie Waldenberger

    (Helmholtz Zentrum München, German Research Center for Environmental Health
    Partner Site Munich Heart Alliance)

  • John C. Chambers

    (School of Public Health, Imperial College London
    Lee Kong Chian School of Medicine
    Ealing Hospital, London North West Healthcare NHS Trust)

  • Abbas Dehghan

    (School of Public Health, Imperial College London
    Imperial College London
    UK Dementia Research Institute at Imperial College London)

  • Marjo-Riitta Järvelin

    (School of Public Health, Imperial College London
    University of Oulu, Pentti Kaiteran katu 1, Linnanmaa
    Oulu University Hospital
    Brunel University London)

Abstract

We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show correlation structures across chromosomes, and are primarily situated in euchromatin, depleted in CpG islands. These genomic loci are predominantly situated in transcription factor binding sites and genomic enhancer regions. Mendelian randomization analysis suggests altered CpG methylation is a consequence of increased blood CRP levels. Mediation analysis reveals obesity and smoking as important underlying driving factors for changed CpG methylation. Finally, we find that an activated CpG signature significantly increases the risk for cardiometabolic diseases and COPD.

Suggested Citation

  • Matthias Wielscher & Pooja R. Mandaviya & Brigitte Kuehnel & Roby Joehanes & Rima Mustafa & Oliver Robinson & Yan Zhang & Barbara Bodinier & Esther Walton & Pashupati P. Mishra & Pascal Schlosser & Ro, 2022. "DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-29792-6
    DOI: 10.1038/s41467-022-29792-6
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    References listed on IDEAS

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    Cited by:

    1. Rebeca Fernández-Carrión & José V. Sorlí & Eva M. Asensio & Eva C. Pascual & Olga Portolés & Andrea Alvarez-Sala & Francesc Francès & Judith B. Ramírez-Sabio & Alejandro Pérez-Fidalgo & Laura V. Villa, 2023. "DNA-Methylation Signatures of Tobacco Smoking in a High Cardiovascular Risk Population: Modulation by the Mediterranean Diet," IJERPH, MDPI, vol. 20(4), pages 1-26, February.

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