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Structural realism, emergence, and predictions in next-generation ecological modelling: Synthesis from a special issue

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  • Grimm, Volker
  • Berger, Uta

Abstract

The two main challenges of ecological modelling are to yield more general understanding and theory and to provide testable and robust predictions. To achieve this, emergence, structural realism, and prediction have to become key elements of designing models. In the special issue “Next-generation ecological modelling”, which is dedicated to Donald DeAngelis on the occasion of his 70th birthday, 16 contributions present and discuss main features of next-generation ecological modelling. One key feature is to base the description of individuals’ behaviour and interactions on first principles rooted in energetic or evolutionary theory. To cope with increasing model complexity, standardization, separate testing of alternative submodels against multiple output patterns, and documenting these tests will be required. Including micro-evolution is essential to capture organisms’ response to changing conditions. Functional types may be used instead of species for representing communities. Model analysis will be challenging, but robustness analysis, which tries to break models’ explanations, can help to tell signals from noise and identify general mechanisms underlying the internal organization of ecological systems. Ultimately, next-generation modelling should aim at developing general theory to better understand stability properties and mechanisms. This understanding then can provide the basis for restoring, maintaining, or strengthening the resilience of ecosystems and supporting sustainable management of natural resources.

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  • Grimm, Volker & Berger, Uta, 2016. "Structural realism, emergence, and predictions in next-generation ecological modelling: Synthesis from a special issue," Ecological Modelling, Elsevier, vol. 326(C), pages 177-187.
  • Handle: RePEc:eee:ecomod:v:326:y:2016:i:c:p:177-187
    DOI: 10.1016/j.ecolmodel.2016.01.001
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    1. Rammig, Anja & Fahse, Lorenz, 2009. "Simulating forest succession after blowdown events: The crucial role of space for a realistic management," Ecological Modelling, Elsevier, vol. 220(24), pages 3555-3564.
    2. Jiang, Jiang & DeAngelis, Donald L. & Teh, Su-Yean & Krauss, Ken W. & Wang, Hongqing & Li, Haidong & Smith, Thomas J. & Koh, Hock-Lye, 2016. "Defining the next generation modeling of coastal ecotone dynamics in response to global change," Ecological Modelling, Elsevier, vol. 326(C), pages 168-176.
    3. Augusiak, Jacqueline & Van den Brink, Paul J. & Grimm, Volker, 2014. "Merging validation and evaluation of ecological models to ‘evaludation’: A review of terminology and a practical approach," Ecological Modelling, Elsevier, vol. 280(C), pages 117-128.
    4. Piou, Cyril & Prévost, Etienne, 2012. "A demo-genetic individual-based model for Atlantic salmon populations: Model structure, parameterization and sensitivity," Ecological Modelling, Elsevier, vol. 231(C), pages 37-52.
    5. Stillman, Richard A. & Wood, Kevin A. & Goss-Custard, John D., 2016. "Deriving simple predictions from complex models to support environmental decision-making," Ecological Modelling, Elsevier, vol. 326(C), pages 134-141.
    6. Grimm, Volker & Berger, Uta, 2016. "Robustness analysis: Deconstructing computational models for ecological theory and applications," Ecological Modelling, Elsevier, vol. 326(C), pages 162-167.
    7. Reuter, Hauke & Kruse, Maren & Rovellini, Alberto & Breckling, Broder, 2016. "Evolutionary trends in fish schools in heterogeneous environments," Ecological Modelling, Elsevier, vol. 326(C), pages 23-35.
    8. Scherer, Cédric & Jeltsch, Florian & Grimm, Volker & Blaum, Niels, 2016. "Merging trait-based and individual-based modelling: An animal functional type approach to explore the responses of birds to climatic and land use changes in semi-arid African savannas," Ecological Modelling, Elsevier, vol. 326(C), pages 75-89.
    9. Vincenot, Christian Ernest & Giannino, Francesco & Rietkerk, Max & Moriya, Kazuyuki & Mazzoleni, Stefano, 2011. "Theoretical considerations on the combined use of System Dynamics and individual-based modeling in ecology," Ecological Modelling, Elsevier, vol. 222(1), pages 210-218.
    10. Singer, Alexander & Johst, Karin & Banitz, Thomas & Fowler, Mike S. & Groeneveld, Jürgen & Gutiérrez, Alvaro G. & Hartig, Florian & Krug, Rainer M. & Liess, Matthias & Matlack, Glenn & Meyer, Katrin M, 2016. "Community dynamics under environmental change: How can next generation mechanistic models improve projections of species distributions?," Ecological Modelling, Elsevier, vol. 326(C), pages 63-74.
    11. Giacomini, Henrique C. & DeAngelis, Donald L. & Trexler, Joel C. & Petrere, Miguel, 2013. "Trait contributions to fish community assembly emerge from trophic interactions in an individual-based model," Ecological Modelling, Elsevier, vol. 251(C), pages 32-43.
    12. An, Li, 2012. "Modeling human decisions in coupled human and natural systems: Review of agent-based models," Ecological Modelling, Elsevier, vol. 229(C), pages 25-36.
    13. Anonymous, 2013. "Introduction to the Issue," Journal of Wine Economics, Cambridge University Press, vol. 8(3), pages 243-243, December.
    14. Nisbet, Roger M. & Martin, Benjamin T. & de Roos, Andre M., 2016. "Integrating ecological insight derived from individual-based simulations and physiologically structured population models," Ecological Modelling, Elsevier, vol. 326(C), pages 101-112.
    15. Tietjen, Britta, 2016. "Same rainfall amount different vegetation—How environmental conditions and their interactions influence savanna dynamics," Ecological Modelling, Elsevier, vol. 326(C), pages 13-22.
    16. Jan C. Thiele & Winfried Kurth & Volker Grimm, 2014. "Facilitating Parameter Estimation and Sensitivity Analysis of Agent-Based Models: A Cookbook Using NetLogo and 'R'," Journal of Artificial Societies and Social Simulation, Journal of Artificial Societies and Social Simulation, vol. 17(3), pages 1-11.
    17. Piou, Cyril & Berger, Uta & Hildenbrandt, Hanno & Grimm, Volker & Diele, Karen & D’Lima, Coralie, 2007. "Simulating cryptic movements of a mangrove crab: Recovery phenomena after small scale fishery," Ecological Modelling, Elsevier, vol. 205(1), pages 110-122.
    18. Lehmann, Sebastian & Huth, Andreas, 2015. "Fast calibration of a dynamic vegetation model with minimum observation data," Ecological Modelling, Elsevier, vol. 301(C), pages 98-105.
    19. van der Vaart, Elske & Beaumont, Mark A. & Johnston, Alice S.A. & Sibly, Richard M., 2015. "Calibration and evaluation of individual-based models using Approximate Bayesian Computation," Ecological Modelling, Elsevier, vol. 312(C), pages 182-190.
    20. Giacomini, Henrique Corrêa & De Marco, Paulo & Petrere, Miguel, 2009. "Exploring community assembly through an individual-based model for trophic interactions," Ecological Modelling, Elsevier, vol. 220(1), pages 23-39.
    21. Anonymous, 2013. "Introduction to the Issue," Journal of Wine Economics, Cambridge University Press, vol. 8(2), pages 129-130, November.
    22. Geoffrey B. West & James H. Brown & Brian J. Enquist, 1997. "A General Model for the Origin of Allometric Scaling Laws in Biology," Working Papers 97-03-019, Santa Fe Institute.
    23. Peters, Ronny & Lin, Yue & Berger, Uta, 2016. "Machine learning meets individual-based modelling: Self-organising feature maps for the analysis of below-ground competition among plants," Ecological Modelling, Elsevier, vol. 326(C), pages 142-151.
    24. Piou, Cyril & Berger, Uta & Grimm, Volker, 2009. "Proposing an information criterion for individual-based models developed in a pattern-oriented modelling framework," Ecological Modelling, Elsevier, vol. 220(17), pages 1957-1967.
    25. Eliassen, Sigrunn & Andersen, Bjørn Snorre & Jørgensen, Christian & Giske, Jarl, 2016. "From sensing to emergent adaptations: Modelling the proximate architecture for decision-making," Ecological Modelling, Elsevier, vol. 326(C), pages 90-100.
    26. Ayllón, Daniel & Railsback, Steven F. & Vincenzi, Simone & Groeneveld, Jürgen & Almodóvar, Ana & Grimm, Volker, 2016. "InSTREAM-Gen: Modelling eco-evolutionary dynamics of trout populations under anthropogenic environmental change," Ecological Modelling, Elsevier, vol. 326(C), pages 36-53.
    27. Grimm, Volker & Augusiak, Jacqueline & Focks, Andreas & Frank, Béatrice M. & Gabsi, Faten & Johnston, Alice S.A. & Liu, Chun & Martin, Benjamin T. & Meli, Mattia & Radchuk, Viktoriia & Thorbek, Pernil, 2014. "Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE," Ecological Modelling, Elsevier, vol. 280(C), pages 129-139.
    28. Belarde, Tyler A. & Railsback, Steven F., 2016. "New predictions from old theory: Emergent effects of multiple stressors in a model of piscivorous fish," Ecological Modelling, Elsevier, vol. 326(C), pages 54-62.
    29. Körner, Katrin & Pfestorf, Hans & May, Felix & Jeltsch, Florian, 2014. "Modelling the effect of belowground herbivory on grassland diversity," Ecological Modelling, Elsevier, vol. 273(C), pages 79-85.
    30. Lorscheid, Iris & Meyer, Matthias, 2016. "Divide and conquer: Configuring submodels for valid and efficient analyses of complex simulation models," Ecological Modelling, Elsevier, vol. 326(C), pages 152-161.
    31. van der Vaart, Elske & Johnston, Alice S.A. & Sibly, Richard M., 2016. "Predicting how many animals will be where: How to build, calibrate and evaluate individual-based models," Ecological Modelling, Elsevier, vol. 326(C), pages 113-123.
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