The ODD Protocol for Describing Agent-Based and Other Simulation Models: A Second Update to Improve Clarity, Replication, and Structural Realism

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1. Kooi, B.W. & Kooijman, S.A.L.M., 2020. "A cohort projection method to follow deb-structured populations with periodic, synchronized and iteroparous reproduction," Ecological Modelling, Elsevier, vol. 436(C).
2. Tardy, Olivia & Lenglos, Christophe & Lai, Sandra & Berteaux, Dominique & Leighton, Patrick A., 2023. "Rabies transmission in the Arctic: An agent-based model reveals the effects of broad-scale movement strategies on contact risk between Arctic foxes," Ecological Modelling, Elsevier, vol. 476(C).
3. Smaldino, Paul E. & Turner, Matthew Adam, 2020. "Covert signaling is an adaptive communication strategy in diverse populations," SocArXiv j9wyn, Center for Open Science.
4. Risso, Lucas Antonio & Ganga, Gilberto Miller Devós & Santa-Eulalia, Luis Antonio de & Godinho Filho, Moacir & Chikhi, Tinhinane & Mosconi, Elaine & Zhang, Kaiwen, 2024. "A framework for modeling and simulating blockchain-based supply chain traceability systems," International Journal of Production Economics, Elsevier, vol. 278(C).
5. Micheletti, Tatiane & Wimmler, Marie-Christin & Berger, Uta & Grimm, Volker & McIntire, Eliot J., 2024. "Beyond guides, protocols and acronyms: Adoption of good modelling practices depends on challenging academia's status quo in ecology," Ecological Modelling, Elsevier, vol. 496(C).
6. Alves, Roberta & Pereira, Cecília Aparecida & Lima, Renato da Silva, 2023. "Operational cost analysis for e-commerce deliveries using agent-based modeling and simulation," Research in Transportation Economics, Elsevier, vol. 101(C).
7. Bernardo Alves Furtado, 2022. "PolicySpace2: Modeling Markets and Endogenous Public Policies," Journal of Artificial Societies and Social Simulation, Journal of Artificial Societies and Social Simulation, vol. 25(1), pages 1-8.
   • Bernardo Alves Furtado, 2021. "PolicySpace2: modeling markets and endogenous public policies," Papers 2102.11929, arXiv.org, revised Oct 2021.
8. Wilansky, Jonathan & Jaeger, Jochen A.G., 2024. "Predicting the effectiveness of wildlife fencing along roads using an individual-based model: How do fence-following distances influence the fence-end effect?," Ecological Modelling, Elsevier, vol. 495(C).
9. Sakiyama, Tomoko, 2023. "Spatial inconsistency of memorized positions produces different types of movements," Ecological Modelling, Elsevier, vol. 481(C).
10. Monks, Thomas & Harper, Alison & Anagnostou, Anastasia & Taylor, Simon J.E., 2022. "Open Science for Computer Simulation," OSF Preprints zpxtm, Center for Open Science.
11. Jascha-Alexander Koch & Jens Lausen & Moritz Kohlhase, 2021. "Internalizing the externalities of overfunding: an agent-based model approach for analyzing the market dynamics on crowdfunding platforms," Journal of Business Economics, Springer, vol. 91(9), pages 1387-1430, November.
12. Crevier, Lucas Phillip & Salkeld, Joseph H & Marley, Jessa & Parrott, Lael, 2021. "Making the best possible choice: Using agent-based modelling to inform wildlife management in small communities," Ecological Modelling, Elsevier, vol. 446(C).
13. Jiaqi Ge & Bernardo Alves Furtado, 2024. "Modelling urban transition with coupled housing and labour markets," Environment and Planning B, , vol. 51(3), pages 590-609, March.
14. Darren Nel & Araz Taeihagh, 2024. "The soft underbelly of complexity science adoption in policymaking: towards addressing frequently overlooked non-technical challenges," Policy Sciences, Springer;Society of Policy Sciences, vol. 57(2), pages 403-436, June.
15. Lapp, Maya & Long, Colby, 2022. "A new approach to agent-based models of Community Resource Management based on the analysis of cheating, monitoring, and sanctioning," Ecological Modelling, Elsevier, vol. 468(C).
16. Reinhard, Stijn & Naranjo, María A. & Polman, Nico & Hennen, Wil, 2022. "Modelling choices and social interactions with a threshold public good: Investment decisions in a polder in Bangladesh," Land Use Policy, Elsevier, vol. 113(C).
17. Sandhu, Rimple & Tripp, Charles & Quon, Eliot & Thedin, Regis & Lawson, Michael & Brandes, David & Farmer, Christopher J. & Miller, Tricia A. & Draxl, Caroline & Doubrawa, Paula & Williams, Lindy & Du, 2022. "Stochastic agent-based model for predicting turbine-scale raptor movements during updraft-subsidized directional flights," Ecological Modelling, Elsevier, vol. 466(C).
18. Schmid, Ueli & Frehner, Monika & Glatthorn, Jonas & Bugmann, Harald, 2023. "ProForM: A simulation model for the management of mountain protection forests," Ecological Modelling, Elsevier, vol. 478(C).
19. Thompson, Noelle E & Butts, David J & Murillo, Michael S & O'Brien, Daniel J & Christensen, Sonja A & Porter, William F & Roloff, Gary J, 2024. "An individual-based model for direct and indirect transmission of chronic wasting disease in free-ranging white-tailed deer," Ecological Modelling, Elsevier, vol. 491(C).
20. Mori, Kensuke & Massolo, Alessandro & Marceau, Danielle & Stefanakis, Emmanuel, 2023. "Modelling the epidemiology of zoonotic parasites transmitted through a predator-prey system in urban landscapes: The Calgary Echinococcus multilocularis Coyote Agent-based model (CEmCA)," Ecological Modelling, Elsevier, vol. 475(C).
21. Jan E. Snellman & Rafael A. Barrio & Kimmo K. Kaski & Maarit J. Korpi–Lagg, 2024. "A modelling study to explore the effects of regional socio-economics on the spreading of epidemics," Journal of Computational Social Science, Springer, vol. 7(3), pages 2535-2562, December.
22. Wood, Kevin A. & Stillman, Richard A. & Newth, Julia L. & Nuijten, Rascha J.M. & Hilton, Geoff M. & Nolet, Bart A. & Rees, Eileen C., 2021. "Predicting avian herbivore responses to changing food availability and competition," Ecological Modelling, Elsevier, vol. 441(C).
23. Wang, Richard & Ye, Zhongnan & Lu, Miaojia & Hsu, Shu-Chien, 2022. "Understanding post-pandemic work-from-home behaviours and community level energy reduction via agent-based modelling," Applied Energy, Elsevier, vol. 322(C).
24. Beatrice Nöldeke & Etti Winter & Yves Laumonier & Trifosa Simamora, 2021. "Simulating Agroforestry Adoption in Rural Indonesia: The Potential of Trees on Farms for Livelihoods and Environment," Land, MDPI, vol. 10(4), pages 1-31, April.
25. Wimmler, Marie-Christin & Berger, Uta, 2024. "How root-grafted trees form networks: Modeling network dynamics with pyNET," Ecological Modelling, Elsevier, vol. 498(C).
26. Nilsson, L. & Bunnefeld, N. & Minderman, J. & Duthie, A. B, 2021. "Effects of stakeholder empowerment on crane population and agricultural production," Ecological Modelling, Elsevier, vol. 440(C).
27. Dur, Gaël & Won, Eun-Ji & Han, Jeonghoon & Lee, Jae-Seong & Souissi, Sami, 2021. "An individual-based model for evaluating post-exposure effects of UV-B radiation on zooplankton reproduction," Ecological Modelling, Elsevier, vol. 441(C).
28. Colin M. Van Oort & Ethan Ratliff-Crain & Brian F. Tivnan & Safwan Wshah, 2023. "Adaptive Agents and Data Quality in Agent-Based Financial Markets," Papers 2311.15974, arXiv.org.
29. Leins, Johannes A. & Banitz, Thomas & Grimm, Volker & Drechsler, Martin, 2021. "High-resolution PVA along large environmental gradients to model the combined effects of climate change and land use timing: lessons from the large marsh grasshopper," Ecological Modelling, Elsevier, vol. 440(C).
30. Zubiria Perez, Alejandra & Bone, Christopher & Stenhouse, Gordon, 2021. "Simulating multi-scale movement decision-making and learning in a large carnivore using agent-based modelling," Ecological Modelling, Elsevier, vol. 452(C).
31. Crouse, Kristin N. & Desai, Nisarg P. & Cassidy, Kira A. & Stahler, Erin E. & Lehman, Clarence L. & Wilson, Michael L., 2022. "Larger territories reduce mortality risk for chimpanzees, wolves, and agents: Multiple lines of evidence in a model validation framework," Ecological Modelling, Elsevier, vol. 471(C).
32. Curk, Te. & Rast, W. & Portas, R. & Kohles, J. & Shatumbu, G. & Cloete, C. & Curk, Ti. & Radchuk, V. & Aschenborn, O. & Melzheimer, J., 2025. "Advantages and disadvantages of using social information for carcass detection–A case study using white-backed vultures," Ecological Modelling, Elsevier, vol. 499(C).
33. Choi, Sunkyung & Maharjan, Rajali & Hong, Tran Thi Nhat & Hanaoka, Shinya, 2024. "Impact of information provision on tsunami evacuation behavior of residents and international tourists in Japan," Transport Policy, Elsevier, vol. 155(C), pages 264-273.
34. María Elena Orduña Alegría & Niels Schütze & Samuel C. Zipper, 2020. "A Serious Board Game to Analyze Socio-Ecological Dynamics towards Collaboration in Agriculture," Sustainability, MDPI, vol. 12(13), pages 1-19, June.
35. Troost, Christian & Huber, Robert & Bell, Andrew R. & van Delden, Hedwig & Filatova, Tatiana & Le, Quang Bao & Lippe, Melvin & Niamir, Leila & Polhill, J. Gareth & Sun, Zhanli & Berger, Thomas, 2023. "How to keep it adequate: A protocol for ensuring validity in agent-based simulation," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 159, pages 1-21.
36. Marohn, Carsten & Troost, Christian & Warth, Benjamin & Bateki, Christian & Zijlstra, Mink & Anwar, Faizan & Williams, Benjamin & Descheemaeker, Katrien & Berger, Thomas & Asch, Folkard & Dickhoefer, , 2022. "Coupled biophysical and decision-making processes in grassland systems in East African savannahs – A modelling framework," Ecological Modelling, Elsevier, vol. 474(C).
37. Sorel, Maeva & Gay, Pierre-Emmanuel & Vernier, Camille & Cissé, Sory & Piou, Cyril, 2024. "Upwind flight partially explains the migratory routes of locust swarms," Ecological Modelling, Elsevier, vol. 489(C).
38. Lai, Samantha & Teo, Theophilus Zhi En & Rullyanto, Arief & Low, Jeffery & Tun, Karenne & Todd, Peter A. & Yaakub, Siti Maryam, 2024. "An agent-based model approach to assessing the role of vegetative fragments in seagrass connectivity," Ecological Modelling, Elsevier, vol. 487(C).
39. Diaz, Stephanie G. & DeAngelis, Donald L. & Gaines, Michael S. & Purdon, Andrew & Mole, Michael A. & van Aarde, Rudi J., 2021. "Development and validation of a spatially-explicit agent-based model for space utilization by African savanna elephants (Loxodonta africana) based on determinants of movement," Ecological Modelling, Elsevier, vol. 447(C).
40. Van Buskirk, Amanda N. & Rosenberry, Christopher S. & Wallingford, Bret D. & Domoto, Emily Just & McDill, Marc E. & Drohan, Patrick J. & Diefenbach, Duane R., 2021. "Modeling how to achieve localized areas of reduced white-tailed deer density," Ecological Modelling, Elsevier, vol. 442(C).
41. Woodson, C.B. & Litvin, S.Y. & Schramski, J.R. & Joye, S.B., 2024. "An individual-based model for exploration of population and stock dynamics in marine fishes," Ecological Modelling, Elsevier, vol. 498(C).
42. Stacy Tessler Lindau & Jennifer A Makelarski & Chaitanya Kaligotla & Emily M Abramsohn & David G Beiser & Chiahung Chou & Nicholson Collier & Elbert S Huang & Charles M Macal & Jonathan Ozik & Elizabe, 2021. "Building and experimenting with an agent-based model to study the population-level impact of CommunityRx, a clinic-based community resource referral intervention," PLOS Computational Biology, Public Library of Science, vol. 17(10), pages 1-23, October.
43. Medeiros-Sousa, Antônio Ralph & Lange, Martin & Mucci, Luis Filipe & Marrelli, Mauro Toledo & Grimm, Volker, 2024. "Modelling the transmission and spread of yellow fever in forest landscapes with different spatial configurations," Ecological Modelling, Elsevier, vol. 489(C).
44. MacPherson, Brian & Scott, Ryan & Gras, Robin, 2023. "Using individual-based modelling to investigate a pluralistic explanation for the prevalence of sexual reproduction in animal species," Ecological Modelling, Elsevier, vol. 475(C).
45. Rahi, Joe El & Weeber, Marc P. & Serafy, Ghada El, 2020. "Modelling the effect of behavior on the distribution of the jellyfish Mauve stinger (Pelagia noctiluca) in the Balearic Sea using an individual-based model," Ecological Modelling, Elsevier, vol. 433(C).
46. Meier, Laura & Brauns, Mario & Grimm, Volker & Weitere, Markus & Frank, Karin, 2022. "MASTIFF: A mechanistic model for cross-scale analyses of the functioning of multiple stressed riverine ecosystems," Ecological Modelling, Elsevier, vol. 470(C).
47. Monks, Thomas & Harper, Alison & Anagnostou, Anastasia & Taylor, Simon J.E., 2022. "Open Science for Computer Simulation," OSF Preprints zpxtm_v1, Center for Open Science.
48. Watson, Joseph W & Boyd, Robin & Dutta, Ritabrata & Vasdekis, Georgios & Walker, Nicola D. & Roy, Shovonlal & Everitt, Richard & Hyder, Kieran & Sibly, Richard M, 2022. "Incorporating environmental variability in a spatially-explicit individual-based model of European sea bass✰," Ecological Modelling, Elsevier, vol. 466(C).
49. Planque, Benjamin & Aarflot, Johanna M. & Buttay, Lucie & Carroll, JoLynn & Fransner, Filippa & Hansen, Cecilie & Husson, Bérengère & Langangen, Øystein & Lindstrøm, Ulf & Pedersen, Torstein & Primice, 2022. "A standard protocol for describing the evaluation of ecological models," Ecological Modelling, Elsevier, vol. 471(C).
50. Bahlburg, Dominik & Meyer, Bettina & Berger, Uta, 2021. "The impact of seasonal regulation of metabolism on the life history of Antarctic krill," Ecological Modelling, Elsevier, vol. 442(C).
51. Medeiros-Sousa, Antônio Ralph & Laporta, Gabriel Zorello & Mucci, Luis Filipe & Marrelli, Mauro Toledo, 2022. "Epizootic dynamics of yellow fever in forest fragments: An agent-based model to explore the influence of vector and host parameters," Ecological Modelling, Elsevier, vol. 466(C).
52. Hofmann Elizondo, Urs & Vogt, Meike, 2022. "Individual-based modeling of shelled pteropods," Ecological Modelling, Elsevier, vol. 468(C).
53. Byer, Nathan W. & Reid, Brendan N., 2022. "The emergence of imperfect philopatry and fidelity in spatially and temporally heterogeneous environments," Ecological Modelling, Elsevier, vol. 468(C).
54. He, Haosen & Buchholtz, Erin & Chen, Frederick & Vogel, Susanne & Yu, Chu A.(Alex), 2022. "An agent-based model of elephant crop consumption walks using combinatorial optimization," Ecological Modelling, Elsevier, vol. 464(C).
55. Breugnot, Paul & Marilleau, Nicolas & Bernard, Laetitia, 2024. "Buzy-pop: Multi-objective budget optimisation for constitutive and adaptive enzymatic activities of microbe populations," Ecological Modelling, Elsevier, vol. 498(C).
56. Anshuka Anshuka & Floris F. Ogtrop & David Sanderson & Simone Z. Leao, 2022. "A systematic review of agent-based model for flood risk management and assessment using the ODD protocol," Natural Hazards: Journal of the International Society for the Prevention and Mitigation of Natural Hazards, Springer;International Society for the Prevention and Mitigation of Natural Hazards, vol. 112(3), pages 2739-2771, July.
57. Chudzinska, Magda & Nabe-Nielsen, Jacob & Smout, Sophie & Aarts, Geert & Brasseur, Sophie & Graham, Isla & Thompson, Paul & McConnell, Bernie, 2021. "AgentSeal: Agent-based model describing movement of marine central-place foragers," Ecological Modelling, Elsevier, vol. 440(C).
58. Lemmen, Carsten & Sommer, Philipp Sebastian, 2024. "Good modelling software practices," Ecological Modelling, Elsevier, vol. 498(C).
59. Berre, D. & Diarisso, T. & Andrieu, N. & Le Page, C. & Corbeels, M., 2021. "Biomass flows in an agro-pastoral village in West-Africa: Who benefits from crop residue mulching?," Agricultural Systems, Elsevier, vol. 187(C).
60. Kjær, Lene J. & Schauber, Eric M., 2022. "The effect of landscape, transmission mode and social behavior on disease transmission: Simulating the transmission of chronic wasting disease in white-tailed deer (Odocoileus virginianus) populations," Ecological Modelling, Elsevier, vol. 472(C).
61. Fouladvand, Javanshir, 2022. "Behavioural attributes towards collective energy security in thermal energy communities: Environmental-friendly behaviour matters," Energy, Elsevier, vol. 261(PB).
62. Eric Innocenti & Dominique Prunetti & Marielle Delhom & Corinne Idda, 2024. "Reusable Building Blocks for Agent-Based Simulations: Towards a Method for Composing and Building ABM/LUCC," Post-Print hal-04862884, HAL.
63. Butts, David J. & Thompson, Noelle E. & Christensen, Sonja A. & Williams, David M. & Murillo, Michael S., 2022. "Data-driven agent-based model building for animal movement through Exploratory Data Analysis," Ecological Modelling, Elsevier, vol. 470(C).
64. Chimienti, Marianna & Desforges, Jean-Pierre & Beumer, Larissa T. & Nabe-Nielsen, Jacob & van Beest, Floris M. & Schmidt, Niels Martin, 2020. "Energetics as common currency for integrating high resolution activity patterns into dynamic energy budget-individual based models," Ecological Modelling, Elsevier, vol. 434(C).
65. Sun, Ran & Nolan, James & Kulshreshtha, Suren, 2021. "Agent-Based Modelling for the Adoption of Beneficial Water Management Practices in Eastern Canada - a Case of the Cost-Share Program in Agri-Environmental Policy Design," 2021 Conference, August 17-31, 2021, Virtual 315340, International Association of Agricultural Economists.
66. Crispim-Mendes, Tiago & Roos, Deon & Ferreira, Clara Mendes & Paupério, Joana & Silva, João Paulo & Godinho, Sérgio & Alves, Paulo Célio & Mira, António & Beja, Pedro & Lambin, Xavier & Pita, Ricardo, 2024. "Patch spatial attributes and time to disturbance affect the emergence of source local populations within ephemeral habitats," Ecological Modelling, Elsevier, vol. 496(C).
67. Noeldeke, Beatrice & Winter, Etti & Ntawuhiganayo, Elisée Bahati, 2022. "Representing human decision-making in agent-based simulation models: Agroforestry adoption in rural Rwanda," Ecological Economics, Elsevier, vol. 200(C).
68. Weller, Florian G. & Webb, Elisabeth B. & Fogenburg, Sean & Beatty, William S. & Kesler, Dylan & Blenk, Robert H. & Ringelman, Kevin M. & Miller, Matt L. & Arzel, Céline & Eadie, John M., 2023. "An agent-based model to quantify energetics, movement and habitat selection of mid-continent mallards in the Mississippi Alluvial Valley," Ecological Modelling, Elsevier, vol. 485(C).
69. Clark, Matt & Andrews, Jeffrey & Hillis, Vicken, 2022. "A quantitative application of diffusion of innovations for modeling the spread of conservation behaviors," Ecological Modelling, Elsevier, vol. 473(C).
70. Brock, Jonas & Guelbenzu-Gonzalo, Maria & Lange, Martin & Tratalos, Jamie A. & Barrett, Damien & Lane, Liz & More, Simon J. & Graham, David A. & Thulke, Hans-Hermann, 2024. "Evaluating the effectiveness & costs of strategies post-eradication to monitor for freedom from BVDV infection in Ireland," Agricultural Systems, Elsevier, vol. 221(C).
71. Petter, Gunnar & Kreft, Holger & Ong, Yongzhi & Zotz, Gerhard & Cabral, Juliano Sarmento, 2021. "Modelling the long-term dynamics of tropical forests: From leaf traits to whole-tree growth patterns," Ecological Modelling, Elsevier, vol. 460(C).
72. Thurner, Stephanie D & Converse, Sarah J & Branch, Trevor A, 2021. "Modeling opportunistic exploitation: increased extinction risk when targeting more than one species," Ecological Modelling, Elsevier, vol. 454(C).
73. An, Li & Grimm, Volker & Sullivan, Abigail & Turner II, B.L. & Malleson, Nicolas & Heppenstall, Alison & Vincenot, Christian & Robinson, Derek & Ye, Xinyue & Liu, Jianguo & Lindkvist, Emilie & Tang, W, 2021. "Challenges, tasks, and opportunities in modeling agent-based complex systems," Ecological Modelling, Elsevier, vol. 457(C).
74. Purathekandy, Anjali & Oommen, Meera Anna & Wikelski, Martin & Subramani, Deepak N., 2024. "An agent-based model of elephant crop raid dynamics in the Periyar–Agasthyamalai complex, India," Ecological Modelling, Elsevier, vol. 496(C).