IDEAS home Printed from https://ideas.repec.org/r/bes/jnlasa/v103i484y2008p1438-1456.html
   My bibliography  Save this item

High-Dimensional Sparse Factor Modeling: Applications in Gene Expression Genomics

Citations

Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
as


Cited by:

  1. Sanjeena Subedi & Antonio Punzo & Salvatore Ingrassia & Paul McNicholas, 2013. "Clustering and classification via cluster-weighted factor analyzers," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 7(1), pages 5-40, March.
  2. Dimitris, Korobilis, 2013. "Forecasting with Factor Models: A Bayesian Model Averaging Perspective," MPRA Paper 52724, University Library of Munich, Germany.
  3. Sung, Bongjung & Lee, Jaeyong, 2023. "Covariance structure estimation with Laplace approximation," Journal of Multivariate Analysis, Elsevier, vol. 198(C).
  4. Simon Beyeler & Sylvia Kaufmann, 2016. "Factor augmented VAR revisited - A sparse dynamic factor model approach," Working Papers 16.08, Swiss National Bank, Study Center Gerzensee.
  5. Conti, Gabriella & Frühwirth-Schnatter, Sylvia & Heckman, James J. & Piatek, Rémi, 2014. "Bayesian exploratory factor analysis," Journal of Econometrics, Elsevier, vol. 183(1), pages 31-57.
  6. Jing Zhou & Anirban Bhattacharya & Amy H. Herring & David B. Dunson, 2015. "Bayesian Factorizations of Big Sparse Tensors," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(512), pages 1562-1576, December.
  7. Sylvia Frühwirth-Schnatter & Darjus Hosszejni & Hedibert Freitas Lopes, 2023. "When It Counts—Econometric Identification of the Basic Factor Model Based on GLT Structures," Econometrics, MDPI, vol. 11(4), pages 1-30, November.
  8. Kim, Hyun Hak & Swanson, Norman R., 2018. "Mining big data using parsimonious factor, machine learning, variable selection and shrinkage methods," International Journal of Forecasting, Elsevier, vol. 34(2), pages 339-354.
  9. Adrian Quintero & Emmanuel Lesaffre & Geert Verbeke, 2024. "Bayesian Exploratory Factor Analysis via Gibbs Sampling," Journal of Educational and Behavioral Statistics, , vol. 49(1), pages 121-142, February.
  10. Pantelis Samartsidis & Shaun R. Seaman & Silvia Montagna & André Charlett & Matthew Hickman & Daniela De Angelis, 2020. "A Bayesian multivariate factor analysis model for evaluating an intervention by using observational time series data on multiple outcomes," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 183(4), pages 1437-1459, October.
  11. Paul D. McNicholas, 2016. "Model-Based Clustering," Journal of Classification, Springer;The Classification Society, vol. 33(3), pages 331-373, October.
  12. Lian, Heng, 2010. "Sparse Bayesian hierarchical modeling of high-dimensional clustering problems," Journal of Multivariate Analysis, Elsevier, vol. 101(7), pages 1728-1737, August.
  13. Aßmann, Christian & Boysen-Hogrefe, Jens & Pape, Markus, 2016. "Bayesian analysis of static and dynamic factor models: An ex-post approach towards the rotation problem," Journal of Econometrics, Elsevier, vol. 192(1), pages 190-206.
  14. Hauber, Philipp & Schumacher, Christian, 2021. "Precision-based sampling with missing observations: A factor model application," Discussion Papers 11/2021, Deutsche Bundesbank.
  15. Aßmann, Christian & Boysen-Hogrefe, Jens & Pape, Markus, 2014. "Bayesian analysis of dynamic factor models: An ex-post approach towards the rotation problem," Kiel Working Papers 1902, Kiel Institute for the World Economy (IfW Kiel).
  16. Seungchul Baek & Yen‐Yi Ho & Yanyuan Ma, 2020. "Using sufficient direction factor model to analyze latent activities associated with breast cancer survival," Biometrics, The International Biometric Society, vol. 76(4), pages 1340-1350, December.
  17. Freyaldenhoven, Simon, 2022. "Factor models with local factors — Determining the number of relevant factors," Journal of Econometrics, Elsevier, vol. 229(1), pages 80-102.
  18. Norman R. Swanson, 2016. "Comment," Journal of Business & Economic Statistics, Taylor & Francis Journals, vol. 34(3), pages 348-353, July.
  19. Dimitris Korobilis & Kenichi Shimizu, 2022. "Bayesian Approaches to Shrinkage and Sparse Estimation," Foundations and Trends(R) in Econometrics, now publishers, vol. 11(4), pages 230-354, June.
  20. Kei Hirose & Miyuki Imada, 2018. "Sparse factor regression via penalized maximum likelihood estimation," Statistical Papers, Springer, vol. 59(2), pages 633-662, June.
  21. Sylvia Fruhwirth-Schnatter, 2023. "Generalized Cumulative Shrinkage Process Priors with Applications to Sparse Bayesian Factor Analysis," Papers 2303.00473, arXiv.org.
  22. Jianqing Fan & Yuan Liao & Martina Mincheva, 2013. "Large covariance estimation by thresholding principal orthogonal complements," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 75(4), pages 603-680, September.
  23. Jaejoon Lee & Seongil Jo & Jaeyong Lee, 2022. "Robust sparse Bayesian infinite factor models," Computational Statistics, Springer, vol. 37(5), pages 2693-2715, November.
  24. Mohsen Maleki & Darren Wraith, 2019. "Mixtures of multivariate restricted skew-normal factor analyzer models in a Bayesian framework," Computational Statistics, Springer, vol. 34(3), pages 1039-1053, September.
  25. Simon Beyeler & Sylvia Kaufmann, 2021. "Reduced‐form factor augmented VAR—Exploiting sparsity to include meaningful factors," Journal of Applied Econometrics, John Wiley & Sons, Ltd., vol. 36(7), pages 989-1012, November.
  26. R Asvat & CA Bisschoff & CJ Botha, 2018. "Factors to Measure the Performance of Private Business Schools in South Africa," Journal of Economics and Behavioral Studies, AMH International, vol. 10(6), pages 50-69.
  27. Tsay, Ruey S. & Ando, Tomohiro, 2012. "Bayesian panel data analysis for exploring the impact of subprime financial crisis on the US stock market," Computational Statistics & Data Analysis, Elsevier, vol. 56(11), pages 3345-3365.
  28. Roberto Casarin & Fausto Corradin & Francesco Ravazzolo & Nguyen Domenico Sartore & Wing-Keung Wong, 2020. "A Scoring Rule for Factor and Autoregressive Models Under Misspecification," Advances in Decision Sciences, Asia University, Taiwan, vol. 24(2), pages 66-103, June.
  29. Christian Aßmann & Jens Boysen-Hogrefe & Markus Pape, 2024. "Post-processing for Bayesian analysis of reduced rank regression models with orthonormality restrictions," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 108(3), pages 577-609, September.
  30. Simon Freyaldenhoven, 2017. "A Generalized Factor Model with Local Factors," 2017 Papers pfr361, Job Market Papers.
  31. Molei Liu & Jiehuan Sun & Jose D. Herazo-Maya & Naftali Kaminski & Hongyu Zhao, 2019. "Joint Models for Time-to-Event Data and Longitudinal Biomarkers of High Dimension," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 11(3), pages 614-629, December.
  32. Hauber, Philipp, 2022. "Real-time nowcasting with sparse factor models," EconStor Preprints 251551, ZBW - Leibniz Information Centre for Economics.
  33. Sun Jiehuan & Warren Joshua L. & Zhao Hongyu, 2017. "A Bayesian semiparametric factor analysis model for subtype identification," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 16(2), pages 145-158, April.
  34. Daniel Felix Ahelegbey & Monica Billio & Roberto Casarin, 2016. "Sparse Graphical Vector Autoregression: A Bayesian Approach," Annals of Economics and Statistics, GENES, issue 123-124, pages 333-361.
  35. Sylvia Kaufmann & Christian Schumacher, 2013. "Bayesian estimation of sparse dynamic factor models with order-independent identification," Working Papers 13.04, Swiss National Bank, Study Center Gerzensee.
  36. Aßmann, Christian & Boysen-Hogrefe, Jens & Pape, Markus, 2012. "The directional identification problem in Bayesian factor analysis: An ex-post approach," Economics Working Papers 2012-11, Christian-Albrechts-University of Kiel, Department of Economics.
  37. Kaufmann, Sylvia & Schumacher, Christian, 2019. "Bayesian estimation of sparse dynamic factor models with order-independent and ex-post mode identification," Journal of Econometrics, Elsevier, vol. 210(1), pages 116-134.
  38. Casarin, Roberto & Grassi, Stefano & Ravazzolo, Francesco & van Dijk, Herman K., 2023. "A flexible predictive density combination for large financial data sets in regular and crisis periods," Journal of Econometrics, Elsevier, vol. 237(2).
  39. Veronika Ročková & Edward I. George, 2016. "Fast Bayesian Factor Analysis via Automatic Rotations to Sparsity," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(516), pages 1608-1622, October.
  40. repec:bfi:wpaper:2014-014 is not listed on IDEAS
  41. Liu, Yixuan & Kirch, Claudia & Lee, Jeong Eun & Meyer, Renate, 2024. "A nonparametrically corrected likelihood for Bayesian spectral analysis of multivariate time series," Computational Statistics & Data Analysis, Elsevier, vol. 199(C).
  42. Zhou, Xiaocong & Nakajima, Jouchi & West, Mike, 2014. "Bayesian forecasting and portfolio decisions using dynamic dependent sparse factor models," International Journal of Forecasting, Elsevier, vol. 30(4), pages 963-980.
  43. Bodnar, Taras & Reiß, Markus, 2016. "Exact and asymptotic tests on a factor model in low and large dimensions with applications," Journal of Multivariate Analysis, Elsevier, vol. 150(C), pages 125-151.
  44. Boysen-Hogrefe, Jens, 2013. "A dynamic factor model with time-varying loadings for euro area bond markets during the debt crisis," Economics Letters, Elsevier, vol. 118(1), pages 50-54.
  45. Jouchi Nakajima & Mike West, 2013. "Bayesian Analysis of Latent Threshold Dynamic Models," Journal of Business & Economic Statistics, Taylor & Francis Journals, vol. 31(2), pages 151-164, April.
  46. Popovic, Gordana C. & Hui, Francis K.C. & Warton, David I., 2018. "A general algorithm for covariance modeling of discrete data," Journal of Multivariate Analysis, Elsevier, vol. 165(C), pages 86-100.
  47. Lucas Joseph & Carvalho Carlos & West Mike, 2009. "A Bayesian Analysis Strategy for Cross-Study Translation of Gene Expression Biomarkers," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 8(1), pages 1-28, February.
  48. Zhengming Xing & Bradley Nicholson & Monica Jimenez & Timothy Veldman & Lori Hudson & Joseph Lucas & David Dunson & Aimee K. Zaas & Christopher W. Woods & Geoffrey S. Ginsburg & Lawrence Carin, 2014. "Bayesian modeling of temporal properties of infectious disease in a college student population," Journal of Applied Statistics, Taylor & Francis Journals, vol. 41(6), pages 1358-1382, June.
  49. Sylvia Kaufmann & Markus Pape, 2024. "Bayesian (non-)unique sparse factor modelling," Working Papers 23.04R, Swiss National Bank, Study Center Gerzensee.
  50. Chuan Gao & Ian C McDowell & Shiwen Zhao & Christopher D Brown & Barbara E Engelhardt, 2016. "Context Specific and Differential Gene Co-expression Networks via Bayesian Biclustering," PLOS Computational Biology, Public Library of Science, vol. 12(7), pages 1-39, July.
  51. Jacobovic Royi, 2018. "On the relation between the true and sample correlations under Bayesian modelling of gene expression datasets," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 17(4), pages 1-14, August.
  52. Ting Fung Ma & Fangfang Wang & Jun Zhu, 2023. "On generalized latent factor modeling and inference for high‐dimensional binomial data," Biometrics, The International Biometric Society, vol. 79(3), pages 2311-2320, September.
  53. Erick da Conceição Amorim & Vinícius Diniz Mayrink, 2020. "Clustering non-linear interactions in factor analysis," METRON, Springer;Sapienza Università di Roma, vol. 78(3), pages 329-352, December.
  54. Blum Yuna & Houée-Bigot Magalie & Causeur David, 2016. "Sparse factor model for co-expression networks with an application using prior biological knowledge," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 15(3), pages 253-272, June.
  55. Baek, Changryong & Gates, Katheleen M. & Leinwand, Benjamin & Pipiras, Vladas, 2021. "Two sample tests for high-dimensional autocovariances," Computational Statistics & Data Analysis, Elsevier, vol. 153(C).
IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.