IDEAS home Printed from https://ideas.repec.org/a/plo/pone00/0202880.html
   My bibliography  Save this article

Using an innovative method to develop the threshold of seasonal influenza epidemic in China

Author

Listed:
  • Xunjie Cheng
  • Tao Chen
  • Yang Yang
  • Jing Yang
  • Dayan Wang
  • Guoqing Hu
  • Yuelong Shu

Abstract

Background: Proper early warning thresholds for defining seasonal influenza epidemics are crucial for timely engagement of intervention strategies, but are currently not well established in China. We propose a novel moving logistic regression method (MLRM) to determine epidemic thresholds and validate them with the Chinese influenza surveillance data. Methods: For each province, historical epidemic waves are formed as weekly percentages of laboratory-confirmed patients among all clinically diagnosed influenza cases. For each epidemic curve that is approximately symmetric, a series of logistic curves are fitted to increasing temporal range of the epidemic, and the threshold is determined based on the best-fitting logistic curve. Results: Using surveillance data of seasonal influenza collected during 2010–2014 in 30 provinces of China, we screened 153 epidemic waves and identified 100 as approximately symmetric; and 85 of the 100 waves were satisfactorily fitted. Compared to two published approaches, the MLRM identified lower thresholds of seasonal influenza epidemics, leading to about three weeks earlier detection of onset and about four weeks later detection of closure of the epidemics. The potential misclassification proportion of influenza epidemic waves was 6% for the MLRM, comparable to that for the two published approaches. Conclusions: The MLRM offers an alternative to existing methods for defining early warning thresholds for the surveillance of seasonal influenza, and can be readily generalized to other countries and other infectious agents. The thresholds we identified can be used for early detection of future influenza epidemics in China.

Suggested Citation

  • Xunjie Cheng & Tao Chen & Yang Yang & Jing Yang & Dayan Wang & Guoqing Hu & Yuelong Shu, 2018. "Using an innovative method to develop the threshold of seasonal influenza epidemic in China," PLOS ONE, Public Library of Science, vol. 13(8), pages 1-13, August.
  • Handle: RePEc:plo:pone00:0202880
    DOI: 10.1371/journal.pone.0202880
    as

    Download full text from publisher

    File URL: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0202880
    Download Restriction: no

    File URL: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0202880&type=printable
    Download Restriction: no

    File URL: https://libkey.io/10.1371/journal.pone.0202880?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Xiaoli Wang & Shuangsheng Wu & C Raina MacIntyre & Hongbin Zhang & Weixian Shi & Xiaomin Peng & Wei Duan & Peng Yang & Yi Zhang & Quanyi Wang, 2015. "Using an Adjusted Serfling Regression Model to Improve the Early Warning at the Arrival of Peak Timing of Influenza in Beijing," PLOS ONE, Public Library of Science, vol. 10(3), pages 1-14, March.
    2. Steffen Unkel & C. Paddy Farrington & Paul H. Garthwaite & Chris Robertson & Nick Andrews, 2012. "Statistical methods for the prospective detection of infectious disease outbreaks: a review," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 175(1), pages 49-82, January.
    3. Xiangjun Du & Libo Dong & Yu Lan & Yousong Peng & Aiping Wu & Ye Zhang & Weijuan Huang & Dayan Wang & Min Wang & Yuanji Guo & Yuelong Shu & Taijiao Jiang, 2012. "Mapping of H3N2 influenza antigenic evolution in China reveals a strategy for vaccine strain recommendation," Nature Communications, Nature, vol. 3(1), pages 1-9, January.
    4. Jingyang Zou & Hua Yang & Hengjian Cui & Yuelong Shu & Peipei Xu & Cuiling Xu & Tao Chen, 2013. "Geographic Divisions and Modeling of Virological Data on Seasonal Influenza in the Chinese Mainland during the 2006–2009 Monitoring Years," PLOS ONE, Public Library of Science, vol. 8(3), pages 1-11, March.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Doyo G Enki & Paul H Garthwaite & C Paddy Farrington & Angela Noufaily & Nick J Andrews & Andre Charlett, 2016. "Comparison of Statistical Algorithms for the Detection of Infectious Disease Outbreaks in Large Multiple Surveillance Systems," PLOS ONE, Public Library of Science, vol. 11(8), pages 1-25, August.
    2. Christin Schröder & Luis Alberto Peña Diaz & Anna Maria Rohde & Brar Piening & Seven Johannes Sam Aghdassi & Georg Pilarski & Norbert Thoma & Petra Gastmeier & Rasmus Leistner & Michael Behnke, 2020. "Lean back and wait for the alarm? Testing an automated alarm system for nosocomial outbreaks to provide support for infection control professionals," PLOS ONE, Public Library of Science, vol. 15(1), pages 1-15, January.
    3. Zhang, Ping & Wang, Jianwen & Atkinson, Peter M., 2019. "Identifying the spatio-temporal risk variability of avian influenza A H7N9 in China," Ecological Modelling, Elsevier, vol. 414(C).
    4. Konstantinos Angelopoulos & Spyridon Lazarakis & Rebecca Mancy & Max Schroeder, 2021. "Pandemic-Induced Wealth and Health Inequality and Risk Exposure," CESifo Working Paper Series 9474, CESifo.
    5. Mikkel Bennedsen, 2021. "Designing a statistical procedure for monitoring global carbon dioxide emissions," Climatic Change, Springer, vol. 166(3), pages 1-19, June.
    6. Ibrahim Musa & Hyun Woo Park & Lkhagvadorj Munkhdalai & Keun Ho Ryu, 2018. "Global Research on Syndromic Surveillance from 1993 to 2017: Bibliometric Analysis and Visualization," Sustainability, MDPI, vol. 10(10), pages 1-20, September.
    7. Bagarello, F. & Gargano, F. & Roccati, F., 2020. "Modeling epidemics through ladder operators," Chaos, Solitons & Fractals, Elsevier, vol. 140(C).
    8. Alex Spanos & George Theocharis & Drosos E Karageorgopoulos & George Peppas & Dimitris Fouskakis & Matthew E Falagas, 2012. "Surveillance of Community Outbreaks of Respiratory Tract Infections Based on House-Call Visits in the Metropolitan Area of Athens, Greece," PLOS ONE, Public Library of Science, vol. 7(8), pages 1-6, August.
    9. Yuan Jiang & Ye-qing Tong & Bin Fang & Wen-kang Zhang & Xue-jie Yu, 2022. "Applying the Moving Epidemic Method to Establish the Influenza Epidemic Thresholds and Intensity Levels for Age-Specific Groups in Hubei Province, China," IJERPH, MDPI, vol. 19(3), pages 1-16, February.
    10. Chengcheng Bei & Shiping Liu & Yin Liao & Gaoliang Tian & Zichen Tian, 2021. "Predicting new cases of COVID‐19 and the application to population sustainability analysis," Accounting and Finance, Accounting and Finance Association of Australia and New Zealand, vol. 61(3), pages 4859-4884, September.
    11. Santitissadeekorn, Naratip & Lloyd, David J.B. & Short, Martin B. & Delahaies, Sylvain, 2020. "Approximate filtering of conditional intensity process for Poisson count data: Application to urban crime," Computational Statistics & Data Analysis, Elsevier, vol. 144(C).
    12. Yeong-Jun Song & Hae-Kwan Cheong & Myung Ki & Ji-Yeon Shin & Seung-sik Hwang & Mira Park & Moran Ki & Jiseun Lim, 2018. "The Epidemiological Influence of Climatic Factors on Shigellosis Incidence Rates in Korea," IJERPH, MDPI, vol. 15(10), pages 1-9, October.
    13. Theologos Dergiades & Costas Milas & Elias Mossialos & Theodore Panagiotidis, 2021. "Effectiveness of Government Policies in Response to the COVID-19 Outbreak," Discussion Paper Series 2021_05, Department of Economics, University of Macedonia, revised Feb 2021.
    14. Marianne Frisén, 2014. "Spatial outbreak detection based on inference principles for multivariate surveillance," IISE Transactions, Taylor & Francis Journals, vol. 46(8), pages 759-769, August.
    15. Thais Paiva & Renato Assunção & Taynãna Simões, 2015. "Prospective space–time surveillance with cumulative surfaces for geographical identification of the emerging cluster," Computational Statistics, Springer, vol. 30(2), pages 419-440, June.
    16. Guojian Ma & Juan Ding & Youqing Lv, 2022. "SEIR Evolutionary Game Model Applied to the Evolution and Control of the Medical Waste Disposal Crisis in China during the COVID-19 Outbreak," Sustainability, MDPI, vol. 14(18), pages 1-18, September.
    17. Maeno, Yoshiharu, 2016. "Detecting a trend change in cross-border epidemic transmission," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 457(C), pages 73-81.
    18. Salmon, Maëlle & Schumacher, Dirk & Höhle, Michael, 2016. "Monitoring Count Time Series in R: Aberration Detection in Public Health Surveillance," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 70(i10).
    19. Saierdaer Aikebaier & Yinghua Song & Moxiao Li & Jiexin Liu, 2022. "Exploring the Impact and Prevention of Epidemics from a New Perspective: COVID-19 Transmission through Express Boxes," IJERPH, MDPI, vol. 19(24), pages 1-14, December.
    20. Ropo E. Ogunsakin & Oluwakemi Ebenezer & Themba G. Ginindza, 2022. "A Bibliometric Analysis of the Literature on Norovirus Disease from 1991–2021," IJERPH, MDPI, vol. 19(5), pages 1-27, February.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:plo:pone00:0202880. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: plosone (email available below). General contact details of provider: https://journals.plos.org/plosone/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.