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A metagenomic catalogue of the ruminant gut archaeome

Author

Listed:
  • Jiandui Mi

    (Lanzhou University
    Lanzhou University)

  • Xiaoping Jing

    (Lanzhou University)

  • Chouxian Ma

    (Independent Researcher)

  • Fuyu Shi

    (Lanzhou University)

  • Ze Cao

    (Lanzhou University)

  • Xin Yang

    (Lanzhou University)

  • Yiwen Yang

    (South China Agricultural University)

  • Apurva Kakade

    (Lanzhou University)

  • Weiwei Wang

    (Guizhou University)

  • Ruijun Long

    (Lanzhou University)

Abstract

While the ruminant gut archaeome regulates the gut microbiota and hydrogen balance, it is also a major producer of the greenhouse gas methane. However, ruminant gut archaeome diversity within the gastrointestinal tract (GIT) of ruminant animals worldwide remains largely underexplored. Here, we construct a catalogue of 998 unique archaeal genomes recovered from the GITs of ruminants, utilizing 2270 metagenomic samples across 10 different ruminant species. Most of the archaeal genomes (669/998 = 67.03%) belong to Methanobacteriaceae and Methanomethylophilaceae (198/998 = 19.84%). We recover 47/279 previously undescribed archaeal genomes at the strain level with completeness of >80% and contamination of

Suggested Citation

  • Jiandui Mi & Xiaoping Jing & Chouxian Ma & Fuyu Shi & Ze Cao & Xin Yang & Yiwen Yang & Apurva Kakade & Weiwei Wang & Ruijun Long, 2024. "A metagenomic catalogue of the ruminant gut archaeome," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-54025-3
    DOI: 10.1038/s41467-024-54025-3
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