IDEAS home Printed from https://ideas.repec.org/a/eee/jmvana/v171y2019icp284-297.html
   My bibliography  Save this article

Feature screening in ultrahigh-dimensional varying-coefficient Cox model

Author

Listed:
  • Yang, Guangren
  • Zhang, Ling
  • Li, Runze
  • Huang, Yuan

Abstract

The varying-coefficient Cox model is flexible and useful for modeling the dynamic changes of regression coefficients in survival analysis. In this paper, we study feature screening for varying-coefficient Cox models in ultrahigh-dimensional covariates. The proposed screening procedure is based on the joint partial likelihood of all predictors, thus different from marginal screening procedures available in the literature. In order to carry out the new procedure, we propose an effective algorithm and establish its ascent property. We further prove that the proposed procedure possesses the sure screening property. That is, with probability tending to 1, the selected variable set includes the actual active predictors. We conducted simulations to evaluate the finite-sample performance of the proposed procedure and compared it with marginal screening procedures. A genomic data set is used for illustration purposes.

Suggested Citation

  • Yang, Guangren & Zhang, Ling & Li, Runze & Huang, Yuan, 2019. "Feature screening in ultrahigh-dimensional varying-coefficient Cox model," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 284-297.
  • Handle: RePEc:eee:jmvana:v:171:y:2019:i:c:p:284-297
    DOI: 10.1016/j.jmva.2018.12.009
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0047259X18301544
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.jmva.2018.12.009?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Jingyuan Liu & Runze Li & Rongling Wu, 2014. "Feature Selection for Varying Coefficient Models With Ultrahigh-Dimensional Covariates," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(505), pages 266-274, March.
    2. Hu, Yuao & Lian, Heng, 2013. "Variable selection in a partially linear proportional hazards model with a diverging dimensionality," Statistics & Probability Letters, Elsevier, vol. 83(1), pages 61-69.
    3. Lian, Heng & Li, Jianbo & Hu, Yuao, 2013. "Shrinkage variable selection and estimation in proportional hazards models with additive structure and high dimensionality," Computational Statistics & Data Analysis, Elsevier, vol. 63(C), pages 99-112.
    4. Hao Helen Zhang & Wenbin Lu, 2007. "Adaptive Lasso for Cox's proportional hazards model," Biometrika, Biometrika Trust, vol. 94(3), pages 691-703.
    5. Chen Xu & Jiahua Chen, 2014. "The Sparse MLE for Ultrahigh-Dimensional Feature Screening," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(507), pages 1257-1269, September.
    6. Zhao, Sihai Dave & Li, Yi, 2012. "Principled sure independence screening for Cox models with ultra-high-dimensional covariates," Journal of Multivariate Analysis, Elsevier, vol. 105(1), pages 397-411.
    7. Jun Yan & Jian Huang, 2012. "Model Selection for Cox Models with Time-Varying Coefficients," Biometrics, The International Biometric Society, vol. 68(2), pages 419-428, June.
    8. Fan, Jianqing & Feng, Yang & Song, Rui, 2011. "Nonparametric Independence Screening in Sparse Ultra-High-Dimensional Additive Models," Journal of the American Statistical Association, American Statistical Association, vol. 106(494), pages 544-557.
    9. Xin-Bing Kong & Zhi Liu & Yuan Yao & Wang Zhou, 2017. "Sure screening by ranking the canonical correlations," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 26(1), pages 46-70, March.
    10. Jianqing Fan & Jinchi Lv, 2008. "Sure independence screening for ultrahigh dimensional feature space," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(5), pages 849-911, November.
    11. Jianqing Fan & Yunbei Ma & Wei Dai, 2014. "Nonparametric Independence Screening in Sparse Ultra-High-Dimensional Varying Coefficient Models," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(507), pages 1270-1284, September.
    12. Xia, Xiaochao & Yang, Hu & Li, Jialiang, 2016. "Feature screening for generalized varying coefficient models with application to dichotomous responses," Computational Statistics & Data Analysis, Elsevier, vol. 102(C), pages 85-97.
    13. Ming-Yen Cheng & Toshio Honda & Jin-Ting Zhang, 2016. "Forward Variable Selection for Sparse Ultra-High Dimensional Varying Coefficient Models," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(515), pages 1209-1221, July.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Congran Yu & Wenwen Guo & Xinyuan Song & Hengjian Cui, 2023. "Feature screening with latent responses," Biometrics, The International Biometric Society, vol. 79(2), pages 878-890, June.
    2. Qu, Lianqiang & Wang, Xiaoyu & Sun, Liuquan, 2022. "Variable screening for varying coefficient models with ultrahigh-dimensional survival data," Computational Statistics & Data Analysis, Elsevier, vol. 172(C).
    3. Jiang, Zhenzhen & Guo, Hongping & Wang, Jinjuan, 2023. "Feature screening for multiple responses," Journal of Multivariate Analysis, Elsevier, vol. 198(C).
    4. Tian, Bing & Liu, Zili & Wang, Hong, 2022. "Non-marginal feature screening for varying coefficient competing risks model," Statistics & Probability Letters, Elsevier, vol. 190(C).

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Lu, Jun & Lin, Lu, 2018. "Feature screening for multi-response varying coefficient models with ultrahigh dimensional predictors," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 242-254.
    2. Jing Zhang & Yanyan Liu & Hengjian Cui, 2021. "Model-free feature screening via distance correlation for ultrahigh dimensional survival data," Statistical Papers, Springer, vol. 62(6), pages 2711-2738, December.
    3. Zhang, Shen & Zhao, Peixin & Li, Gaorong & Xu, Wangli, 2019. "Nonparametric independence screening for ultra-high dimensional generalized varying coefficient models with longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 37-52.
    4. Zhang, Shucong & Zhou, Yong, 2018. "Variable screening for ultrahigh dimensional heterogeneous data via conditional quantile correlations," Journal of Multivariate Analysis, Elsevier, vol. 165(C), pages 1-13.
    5. Akira Shinkyu, 2023. "Forward Selection for Feature Screening and Structure Identification in Varying Coefficient Models," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 85(1), pages 485-511, February.
    6. Randall Reese & Guifang Fu & Geran Zhao & Xiaotian Dai & Xiaotian Li & Kenneth Chiu, 2022. "Epistasis Detection via the Joint Cumulant," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 14(3), pages 514-532, December.
    7. Jing Zhang & Haibo Zhou & Yanyan Liu & Jianwen Cai, 2021. "Conditional screening for ultrahigh-dimensional survival data in case-cohort studies," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 27(4), pages 632-661, October.
    8. Qu, Lianqiang & Wang, Xiaoyu & Sun, Liuquan, 2022. "Variable screening for varying coefficient models with ultrahigh-dimensional survival data," Computational Statistics & Data Analysis, Elsevier, vol. 172(C).
    9. Wang, Christina Dan & Chen, Zhao & Lian, Yimin & Chen, Min, 2022. "Asset selection based on high frequency Sharpe ratio," Journal of Econometrics, Elsevier, vol. 227(1), pages 168-188.
    10. He, Yong & Zhang, Liang & Ji, Jiadong & Zhang, Xinsheng, 2019. "Robust feature screening for elliptical copula regression model," Journal of Multivariate Analysis, Elsevier, vol. 173(C), pages 568-582.
    11. Zhang, Shucong & Pan, Jing & Zhou, Yong, 2018. "Robust conditional nonparametric independence screening for ultrahigh-dimensional data," Statistics & Probability Letters, Elsevier, vol. 143(C), pages 95-101.
    12. Dai, Linlin & Chen, Kani & Sun, Zhihua & Liu, Zhenqiu & Li, Gang, 2018. "Broken adaptive ridge regression and its asymptotic properties," Journal of Multivariate Analysis, Elsevier, vol. 168(C), pages 334-351.
    13. Liming Wang & Xingxiang Li & Xiaoqing Wang & Peng Lai, 2022. "Unified mean-variance feature screening for ultrahigh-dimensional regression," Computational Statistics, Springer, vol. 37(4), pages 1887-1918, September.
    14. Xia, Xiaochao & Yang, Hu & Li, Jialiang, 2016. "Feature screening for generalized varying coefficient models with application to dichotomous responses," Computational Statistics & Data Analysis, Elsevier, vol. 102(C), pages 85-97.
    15. Xiaolin Chen & Xiaojing Chen & Yi Liu, 2019. "A note on quantile feature screening via distance correlation," Statistical Papers, Springer, vol. 60(5), pages 1741-1762, October.
    16. Guo, Chaohui & Lv, Jing & Wu, Jibo, 2021. "Composite quantile regression for ultra-high dimensional semiparametric model averaging," Computational Statistics & Data Analysis, Elsevier, vol. 160(C).
    17. Xi Wu & Shifeng Xiong & Weiyan Mu, 2023. "An Ensemble Method for Feature Screening," Mathematics, MDPI, vol. 11(2), pages 1-14, January.
    18. Jia Chen & Degui Li & Oliver Linton & Zudi Lu, 2015. "Semiparametric Model Averaging of Ultra-High Dimensional Time Series," Discussion Papers 15/18, Department of Economics, University of York.
    19. Haofeng Wang & Hongxia Jin & Xuejun Jiang & Jingzhi Li, 2022. "Model Selection for High Dimensional Nonparametric Additive Models via Ridge Estimation," Mathematics, MDPI, vol. 10(23), pages 1-22, December.
    20. Xin-Bing Kong & Zhi Liu & Yuan Yao & Wang Zhou, 2017. "Sure screening by ranking the canonical correlations," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 26(1), pages 46-70, March.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:jmvana:v:171:y:2019:i:c:p:284-297. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/wps/find/journaldescription.cws_home/622892/description#description .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.