IDEAS home Printed from https://ideas.repec.org/a/eee/intfor/v38y2022i2p505-520.html
   My bibliography  Save this article

Hawkes process modeling of COVID-19 with mobility leading indicators and spatial covariates

Author

Listed:
  • Chiang, Wen-Hao
  • Liu, Xueying
  • Mohler, George

Abstract

Hawkes processes are used in statistical modeling for event clustering and causal inference, while they also can be viewed as stochastic versions of popular compartmental models used in epidemiology. Here we show how to develop accurate models of COVID-19 transmission using Hawkes processes with spatial-temporal covariates. We model the conditional intensity of new COVID-19 cases and deaths in the U.S. at the county level, estimating the dynamic reproduction number of the virus within an EM algorithm through a regression on Google mobility indices and demographic covariates in the maximization step. We validate the approach on both short-term and long-term forecasting tasks, showing that the Hawkes process outperforms several models currently used to track the pandemic, including an ensemble approach and an SEIR-variant. We also investigate which covariates and mobility indices are most important for building forecasts of COVID-19 in the U.S.

Suggested Citation

  • Chiang, Wen-Hao & Liu, Xueying & Mohler, George, 2022. "Hawkes process modeling of COVID-19 with mobility leading indicators and spatial covariates," International Journal of Forecasting, Elsevier, vol. 38(2), pages 505-520.
  • Handle: RePEc:eee:intfor:v:38:y:2022:i:2:p:505-520
    DOI: 10.1016/j.ijforecast.2021.07.001
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0169207021001126
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.ijforecast.2021.07.001?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Veen, Alejandro & Schoenberg, Frederic P., 2008. "Estimation of SpaceTime Branching Process Models in Seismology Using an EMType Algorithm," Journal of the American Statistical Association, American Statistical Association, vol. 103, pages 614-624, June.
    2. J. Molyneux & J. S. Gordon & F. P. Schoenberg, 2018. "Assessing the predictive accuracy of earthquake strike angle estimates using nonparametric Hawkes processes," Environmetrics, John Wiley & Sons, Ltd., vol. 29(2), March.
    3. Sancetta, Alessio, 2018. "Estimation For The Prediction Of Point Processes With Many Covariates," Econometric Theory, Cambridge University Press, vol. 34(3), pages 598-627, June.
    4. Johannes Bracher & Evan L Ray & Tilmann Gneiting & Nicholas G Reich, 2021. "Evaluating epidemic forecasts in an interval format," PLOS Computational Biology, Public Library of Science, vol. 17(2), pages 1-15, February.
    5. Alex Reinhart & Joel Greenhouse, 2018. "Self‐exciting point processes with spatial covariates: modelling the dynamics of crime," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 67(5), pages 1305-1329, November.
    6. Mohler, George & Carter, Jeremy & Raje, Rajeev, 2018. "Improving social harm indices with a modulated Hawkes process," International Journal of Forecasting, Elsevier, vol. 34(3), pages 431-439.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Sobin Joseph & Shashi Jain, 2023. "A neural network based model for multi-dimensional nonlinear Hawkes processes," Papers 2303.03073, arXiv.org.
    2. Dharmaraja Selvamuthu & Paola Tardelli, 2022. "Infinite-server systems with Hawkes arrivals and Hawkes services," Queueing Systems: Theory and Applications, Springer, vol. 101(3), pages 329-351, August.
    3. Vamsi K. Potluru & Daniel Borrajo & Andrea Coletta & Niccol`o Dalmasso & Yousef El-Laham & Elizabeth Fons & Mohsen Ghassemi & Sriram Gopalakrishnan & Vikesh Gosai & Eleonora Kreav{c}i'c & Ganapathy Ma, 2023. "Synthetic Data Applications in Finance," Papers 2401.00081, arXiv.org, revised Mar 2024.
    4. Tomlinson, Matthew F. & Greenwood, David & Mucha-Kruczyński, Marcin, 2024. "2T-POT Hawkes model for left- and right-tail conditional quantile forecasts of financial log returns: Out-of-sample comparison of conditional EVT models," International Journal of Forecasting, Elsevier, vol. 40(1), pages 324-347.
    5. Francesco Serafini & Finn Lindgren & Mark Naylor, 2023. "Approximation of Bayesian Hawkes process with inlabru," Environmetrics, John Wiley & Sons, Ltd., vol. 34(5), August.
    6. Youngsoo Seol, 2023. "Large Deviations for Hawkes Processes with Randomized Baseline Intensity," Mathematics, MDPI, vol. 11(8), pages 1-10, April.
    7. Mercuri, Lorenzo & Perchiazzo, Andrea & Rroji, Edit, 2024. "A Hawkes model with CARMA(p,q) intensity," Insurance: Mathematics and Economics, Elsevier, vol. 116(C), pages 1-26.
    8. Faizeh Hatami & Shi Chen & Rajib Paul & Jean-Claude Thill, 2022. "Simulating and Forecasting the COVID-19 Spread in a U.S. Metropolitan Region with a Spatial SEIR Model," IJERPH, MDPI, vol. 19(23), pages 1-16, November.
    9. Choudhury, Nishat Alam & Ramkumar, M. & Schoenherr, Tobias & Singh, Shalabh, 2023. "The role of operations and supply chain management during epidemics and pandemics: Potential and future research opportunities," Transportation Research Part E: Logistics and Transportation Review, Elsevier, vol. 175(C).

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Francesco Serafini & Finn Lindgren & Mark Naylor, 2023. "Approximation of Bayesian Hawkes process with inlabru," Environmetrics, John Wiley & Sons, Ltd., vol. 34(5), August.
    2. Frederic Paik Schoenberg, 2022. "Nonparametric estimation of variable productivity Hawkes processes," Environmetrics, John Wiley & Sons, Ltd., vol. 33(6), September.
    3. Mohler, George, 2014. "Marked point process hotspot maps for homicide and gun crime prediction in Chicago," International Journal of Forecasting, Elsevier, vol. 30(3), pages 491-497.
    4. Peter Halpin & Paul Boeck, 2013. "Modelling Dyadic Interaction with Hawkes Processes," Psychometrika, Springer;The Psychometric Society, vol. 78(4), pages 793-814, October.
    5. Chenlong Li & Zhanjie Song & Wenjun Wang, 2020. "Space–time inhomogeneous background intensity estimators for semi-parametric space–time self-exciting point process models," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 72(4), pages 945-967, August.
    6. Hautphenne, Sophie & Fackrell, Mark, 2014. "An EM algorithm for the model fitting of Markovian binary trees," Computational Statistics & Data Analysis, Elsevier, vol. 70(C), pages 19-34.
    7. Julio A. Crego, 2017. "Short Selling Ban and Intraday Dynamics," Working Papers wp2018_1715, CEMFI.
    8. Eric W. Fox & Martin B. Short & Frederic P. Schoenberg & Kathryn D. Coronges & Andrea L. Bertozzi, 2016. "Modeling E-mail Networks and Inferring Leadership Using Self-Exciting Point Processes," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(514), pages 564-584, April.
    9. Zhichao Li, 2022. "Forecasting Weekly Dengue Cases by Integrating Google Earth Engine-Based Risk Predictor Generation and Google Colab-Based Deep Learning Modeling in Fortaleza and the Federal District, Brazil," IJERPH, MDPI, vol. 19(20), pages 1-16, October.
    10. Wheatley, Spencer & Filimonov, Vladimir & Sornette, Didier, 2016. "The Hawkes process with renewal immigration & its estimation with an EM algorithm," Computational Statistics & Data Analysis, Elsevier, vol. 94(C), pages 120-135.
    11. Tim K. Tsang & Qiurui Du & Benjamin J. Cowling & Cécile Viboud, 2024. "An adaptive weight ensemble approach to forecast influenza activity in an irregular seasonality context," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
    12. Wang, Xiaoqian & Hyndman, Rob J. & Li, Feng & Kang, Yanfei, 2023. "Forecast combinations: An over 50-year review," International Journal of Forecasting, Elsevier, vol. 39(4), pages 1518-1547.
    13. Fabian Kruger & Hendrik Plett, 2022. "Prediction intervals for economic fixed-event forecasts," Papers 2210.13562, arXiv.org, revised Mar 2024.
    14. Giada Adelfio & Arianna Agosto & Marcello Chiodi & Paolo Giudici, 2021. "Financial contagion through space-time point processes," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 30(2), pages 665-688, June.
    15. Leogrande, Angelo, 2024. "Strategie innovative per la logistica: il valore del kitting e assembly nel settore idrotermosanitario," MPRA Paper 122746, University Library of Munich, Germany.
    16. Angelos Dassios & Hongbiao Zhao, 2017. "A Generalized Contagion Process With An Application To Credit Risk," International Journal of Theoretical and Applied Finance (IJTAF), World Scientific Publishing Co. Pte. Ltd., vol. 20(01), pages 1-33, February.
    17. Chenlong Li & Kaiyan Cui, 2024. "Multivariate Hawkes processes with spatial covariates for spatiotemporal event data analysis," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 76(4), pages 535-578, August.
    18. Sarabeth M. Mathis & Alexander E. Webber & Tomás M. León & Erin L. Murray & Monica Sun & Lauren A. White & Logan C. Brooks & Alden Green & Addison J. Hu & Roni Rosenfeld & Dmitry Shemetov & Ryan J. Ti, 2024. "Evaluation of FluSight influenza forecasting in the 2021–22 and 2022–23 seasons with a new target laboratory-confirmed influenza hospitalizations," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
    19. Grames, Eliza M. & Stepule, Piper L. & Herrick, Susan Z. & Ranelli, Benjamin T. & Elphick, Chris S., 2022. "Separating acoustic signal into underlying behaviors with self-exciting point process models," Ecological Modelling, Elsevier, vol. 468(C).
    20. Luis A. Barboza & Shu Wei Chou Chen & Marcela Alfaro Córdoba & Eric J. Alfaro & Hugo G. Hidalgo, 2023. "Spatio‐temporal downscaling emulator for regional climate models," Environmetrics, John Wiley & Sons, Ltd., vol. 34(7), November.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:intfor:v:38:y:2022:i:2:p:505-520. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/ijforecast .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.