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Evaluating the performance of individual-based animal movement models in novel environments

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  • Watkins, Katherine Shepard
  • Rose, Kenneth A.

Abstract

Simulating animal movement in spatially explicit individual-based models (IBMs) is both challenging and critically important to accurately estimating population dynamics. A number of different approaches have been developed that make different assumptions about how individuals move in their environment and use different mathematics to translate movement cues into a behavioral response. Properly calibrated movement models should produce realistic movement in both conditions encountered during calibration and in novel conditions; however, most studies to date have not tested movement models in novel conditions. We compared four distinct movement approaches or sub-models (restricted-area search, kinesis, event-based, and run and tumble) using an IBM loosely based on a small pelagic fish (e.g. Engraulidae) that simulated growth, mortality, and movement of a cohort on a 2-dimensional grid. We trained the sub-models with a genetic algorithm in one set of environmental conditions and then tested them in other three environments. The sub-models generally performed well in novel environments, except restricted-area search and event-based that needed to be trained in environments with gradients similar to the test environment. Also, run and tumble produced near-random distributions in all training environments except the one with the steepest habitat quality gradient, and it produced random distributions in all novel test environments. In selecting a movement sub-model, researchers should consider the assumptions of potential sub-models, the observed movement patterns of the species of interest, and the shape and steepness of the underlying habitat quality gradient.

Suggested Citation

  • Watkins, Katherine Shepard & Rose, Kenneth A., 2013. "Evaluating the performance of individual-based animal movement models in novel environments," Ecological Modelling, Elsevier, vol. 250(C), pages 214-234.
  • Handle: RePEc:eee:ecomod:v:250:y:2013:i:c:p:214-234
    DOI: 10.1016/j.ecolmodel.2012.11.011
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    1. Duboz, Raphaël & Versmisse, David & Travers, Morgane & Ramat, Eric & Shin, Yunne-Jai, 2010. "Application of an evolutionary algorithm to the inverse parameter estimation of an individual-based model," Ecological Modelling, Elsevier, vol. 221(5), pages 840-849.
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    3. Conner, Mary M. & Ebinger, Michael R. & Knowlton, Frederick F., 2008. "Evaluating coyote management strategies using a spatially explicit, individual-based, socially structured population model," Ecological Modelling, Elsevier, vol. 219(1), pages 234-247.
    4. Campbell, Matthew D. & Rose, Kenneth & Boswell, Kevin & Cowan, James, 2011. "Individual-based modeling of an artificial reef fish community: Effects of habitat quantity and degree of refuge," Ecological Modelling, Elsevier, vol. 222(23), pages 3895-3909.
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    3. Watkins, Katherine Shepard & Rose, Kenneth A., 2017. "Simulating individual-based movement in dynamic environments," Ecological Modelling, Elsevier, vol. 356(C), pages 59-72.
    4. Fulford, R.S. & Peterson, M.S. & Wu, W. & Grammer, P.O., 2014. "An ecological model of the habitat mosaic in estuarine nursery areas: Part II—Projecting effects of sea level rise on fish production," Ecological Modelling, Elsevier, vol. 273(C), pages 96-108.
    5. Morrice, Katherine J. & Baptista, António M. & Burke, Brian J., 2020. "Environmental and behavioral controls on juvenile Chinook salmon migration pathways in the Columbia River estuary," Ecological Modelling, Elsevier, vol. 427(C).
    6. Chloe Bracis & Eliezer Gurarie & Bram Van Moorter & R Andrew Goodwin, 2015. "Memory Effects on Movement Behavior in Animal Foraging," PLOS ONE, Public Library of Science, vol. 10(8), pages 1-21, August.
    7. Politikos, Dimitrios V. & Huret, Martin & Petitgas, Pierre, 2015. "A coupled movement and bioenergetics model to explore the spawning migration of anchovy in the Bay of Biscay," Ecological Modelling, Elsevier, vol. 313(C), pages 212-222.

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