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A simulation model for Japanese sardine (Sardinops melanostictus) migrations in the western North Pacific

Author

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  • Okunishi, Takeshi
  • Yamanaka, Yasuhiro
  • Ito, Shin-ichi

Abstract

A two-dimensional individual-based model coupled with fish bioenergetics was developed to simulate migration and growth of Japanese sardine (Sardinops melanostictus) in the western North Pacific. In the model, fish movement is controlled by feeding and spawning migrations with passive transport by simulated ocean current. Feeding migration was assumed to be governed by search for local optimal habitats, which is estimated by the spatial distribution of net growth rate of a sardine bioenergetics model. The forage density is one of the most important factors which determines the geographical distributions of Japanese sardine during their feeding migrations. Spawning migration was modeled by an artificial neural network (ANN) with an input layer composed of five neurons that receive environmental information (surface temperature, temperature change experienced, current speed, day length and distance from land). Once the weight of the ANN was determined, the fish movement was solved by combining with the feeding migration model. To obtain the weights of the ANN, three experiments were conducted in which (1) the ANN was trained with back propagation (BP) method with optimum training data, (2) genetic algorithm (GA) was used to adjust the weights and (3) the weights of the ANN were decided by the GA with BP, respectively. BP is a supervised learning technique for training ANNs. GA is a search technique used in computing to find approximate solutions, such as optimization of parameters. Condition factor of sardine in the model is used as a factor of optimization in the GA works. The methods using only BP or GA did not work to search the appropriate weights in the ANN for spawning migration. In the third method, which is a combined approach of GA with BP, the model reproduced the most realistic spawning migration of Japanese sardine. The changes in temperature and day length are important factors for the orientation cues of Japanese sardine according to the sensitivity analysis of the weights of the ANN.

Suggested Citation

  • Okunishi, Takeshi & Yamanaka, Yasuhiro & Ito, Shin-ichi, 2009. "A simulation model for Japanese sardine (Sardinops melanostictus) migrations in the western North Pacific," Ecological Modelling, Elsevier, vol. 220(4), pages 462-479.
  • Handle: RePEc:eee:ecomod:v:220:y:2009:i:4:p:462-479
    DOI: 10.1016/j.ecolmodel.2008.10.020
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    References listed on IDEAS

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    1. Megrey, Bernard A. & Rose, Kenneth A. & Ito, Shin-ichi & Hay, Douglas E. & Werner, Francisco E. & Yamanaka, Yasuhiro & Aita, Maki Noguchi, 2007. "North Pacific basin-scale differences in lower and higher trophic level marine ecosystem responses to climate impacts using a nutrient-phytoplanktonā€“zooplankton model coupled to a fish bioenergetics m," Ecological Modelling, Elsevier, vol. 202(1), pages 196-210.
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    Cited by:

    1. McLane, Adam J. & Semeniuk, Christina & McDermid, Gregory J. & Marceau, Danielle J., 2011. "The role of agent-based models in wildlife ecology and management," Ecological Modelling, Elsevier, vol. 222(8), pages 1544-1556.
    2. Kakehi, Shigeho & Abo, Jun-ichi & Miyamoto, Hiroomi & Fuji, Taiki & Watanabe, Kazuyoshi & Yamashita, Hideyuki & Suyama, Satoshi, 2020. "Forecasting Pacific saury (Cololabis saira) fishing grounds off Japan using a migration model driven by an ocean circulation model," Ecological Modelling, Elsevier, vol. 431(C).
    3. Watkins, Katherine Shepard & Rose, Kenneth A., 2017. "Simulating individual-based movement in dynamic environments," Ecological Modelling, Elsevier, vol. 356(C), pages 59-72.
    4. Hamza, Faseela & M, Anju & Valsala, Vinu & R, Smitha B., 2021. "A bioenergetics model for seasonal growth of Indian oil sardine (Sardinella longiceps) in the Indian west coast," Ecological Modelling, Elsevier, vol. 456(C).
    5. Athanasios Gkanasos & Stylianos Somarakis & Kostas Tsiaras & Dimitrios Kleftogiannis & Marianna Giannoulaki & Eudoxia Schismenou & Sarantis Sofianos & George Triantafyllou, 2019. "Development, application and evaluation of a 1-D full life cycle anchovy and sardine model for the North Aegean Sea (Eastern Mediterranean)," PLOS ONE, Public Library of Science, vol. 14(8), pages 1-24, August.
    6. Watkins, Katherine Shepard & Rose, Kenneth A., 2013. "Evaluating the performance of individual-based animal movement models in novel environments," Ecological Modelling, Elsevier, vol. 250(C), pages 214-234.
    7. Politikos, Dimitrios V. & Huret, Martin & Petitgas, Pierre, 2015. "A coupled movement and bioenergetics model to explore the spawning migration of anchovy in the Bay of Biscay," Ecological Modelling, Elsevier, vol. 313(C), pages 212-222.
    8. Takeshi Okunishi & Shin-ichi Ito & Taketo Hashioka & Takashi Sakamoto & Naoki Yoshie & Hiroshi Sumata & Yumiko Yara & Naosuke Okada & Yasuhiro Yamanaka, 2012. "Impacts of climate change on growth, migration and recruitment success of Japanese sardine (Sardinops melanostictus) in the western North Pacific," Climatic Change, Springer, vol. 115(3), pages 485-503, December.
    9. Pata, Patrick R. & YƱiguez, Aletta T. & Deauna, Josephine Dianne L. & De Guzman, Asuncion B. & Jimenez, Cesaria R. & Rosario, Roselle T. Borja-Del & Villanoy, Cesar L., 2021. "Insights into the environmental conditions contributing to variability in the larval recruitment of the tropical sardine Sardinella lemuru," Ecological Modelling, Elsevier, vol. 451(C).

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