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Predictively consistent prior effective sample sizes

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  • Beat Neuenschwander
  • Sebastian Weber
  • Heinz Schmidli
  • Anthony O'Hagan

Abstract

Determining the sample size of an experiment can be challenging, even more so when incorporating external information via a prior distribution. Such information is increasingly used to reduce the size of the control group in randomized clinical trials. Knowing the amount of prior information, expressed as an equivalent prior effective sample size (ESS), clearly facilitates trial designs. Various methods to obtain a prior's ESS have been proposed recently. They have been justified by the fact that they give the standard ESS for one‐parameter exponential families. However, despite being based on similar information‐based metrics, they may lead to surprisingly different ESS for nonconjugate settings, which complicates many designs with prior information. We show that current methods fail a basic predictive consistency criterion, which requires the expected posterior‐predictive ESS for a sample of size N to be the sum of the prior ESS and N. The expected local‐information‐ratio ESS is introduced and shown to be predictively consistent. It corrects the ESS of current methods, as shown for normally distributed data with a heavy‐tailed Student‐t prior and exponential data with a generalized Gamma prior. Finally, two applications are discussed: the prior ESS for the control group derived from historical data and the posterior ESS for hierarchical subgroup analyses.

Suggested Citation

  • Beat Neuenschwander & Sebastian Weber & Heinz Schmidli & Anthony O'Hagan, 2020. "Predictively consistent prior effective sample sizes," Biometrics, The International Biometric Society, vol. 76(2), pages 578-587, June.
  • Handle: RePEc:bla:biomet:v:76:y:2020:i:2:p:578-587
    DOI: 10.1111/biom.13252
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    References listed on IDEAS

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    1. Heinz Schmidli & Sandro Gsteiger & Satrajit Roychoudhury & Anthony O'Hagan & David Spiegelhalter & Beat Neuenschwander, 2014. "Robust meta-analytic-predictive priors in clinical trials with historical control information," Biometrics, The International Biometric Society, vol. 70(4), pages 1023-1032, December.
    2. Satoshi Morita & Peter F. Thall & Peter Müller, 2008. "Determining the Effective Sample Size of a Parametric Prior," Biometrics, The International Biometric Society, vol. 64(2), pages 595-602, June.
    3. L. G. Leon-Novelo & B. Nebiyou Bekele & P. Müller & F. Quintana & K. Wathen, 2012. "Borrowing Strength with Nonexchangeable Priors over Subpopulations," Biometrics, The International Biometric Society, vol. 68(2), pages 550-558, June.
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    Cited by:

    1. Liyun Jiang & Lei Nie & Ying Yuan, 2023. "Elastic priors to dynamically borrow information from historical data in clinical trials," Biometrics, The International Biometric Society, vol. 79(1), pages 49-60, March.
    2. Danila Azzolina & Paola Berchialla & Silvia Bressan & Liviana Da Dalt & Dario Gregori & Ileana Baldi, 2022. "A Bayesian Sample Size Estimation Procedure Based on a B-Splines Semiparametric Elicitation Method," IJERPH, MDPI, vol. 19(21), pages 1-15, October.
    3. Sidi Wang & Kelley M. Kidwell & Satrajit Roychoudhury, 2023. "Dynamic enrichment of Bayesian small‐sample, sequential, multiple assignment randomized trial design using natural history data: a case study from Duchenne muscular dystrophy," Biometrics, The International Biometric Society, vol. 79(4), pages 3612-3623, December.
    4. Meghna Bose & Jean‐François Angers & Atanu Biswas, 2023. "Prior effective sample size in phase II clinical trials with mixed binary and continuous responses," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 77(2), pages 233-248, May.
    5. Haiyan Zheng & Thomas Jaki & James M.S. Wason, 2023. "Bayesian sample size determination using commensurate priors to leverage preexperimental data," Biometrics, The International Biometric Society, vol. 79(2), pages 669-683, June.
    6. Atanu Biswas & Jean‐François Angers, 2020. "Discussion on “Predictively consistent prior effective sample sizes,” by Beat Neuenschwander, Sebastian Weber, Heinz Schmidli, and Anthony O'Hagan," Biometrics, The International Biometric Society, vol. 76(2), pages 591-594, June.

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