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Bayesian Inference for Stochastic Kinetic Models Using a Diffusion Approximation

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  • A. Golightly
  • D. J. Wilkinson

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  • A. Golightly & D. J. Wilkinson, 2005. "Bayesian Inference for Stochastic Kinetic Models Using a Diffusion Approximation," Biometrics, The International Biometric Society, vol. 61(3), pages 781-788, September.
    • Handle: RePEc:bla:biomet:v:61:y:2005:i:3:p:781-788
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    File URL: http://hdl.handle.net/10.1111/j.1541-0420.2005.00345.x
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    References listed on IDEAS

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    1. Sangjoon Kim & Neil Shephard & Siddhartha Chib, 1998. "Stochastic Volatility: Likelihood Inference and Comparison with ARCH Models," The Review of Economic Studies, Review of Economic Studies Ltd, vol. 65(3), pages 361-393.
    2. Eraker, Bjorn, 2001. "MCMC Analysis of Diffusion Models with Application to Finance," Journal of Business & Economic Statistics, American Statistical Association, vol. 19(2), pages 177-191, April.
    3. Durham, Garland B & Gallant, A Ronald, 2002. "Numerical Techniques for Maximum Likelihood Estimation of Continuous-Time Diffusion Processes," Journal of Business & Economic Statistics, American Statistical Association, vol. 20(3), pages 297-316, July.
    4. Durham, Garland B & Gallant, A Ronald, 2002. "Numerical Techniques for Maximum Likelihood Estimation of Continuous-Time Diffusion Processes: Reply," Journal of Business & Economic Statistics, American Statistical Association, vol. 20(3), pages 335-338, July.
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    Citations

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    Cited by:

    1. Sun, Libo & Lee, Chihoon & Hoeting, Jennifer A., 2015. "A penalized simulated maximum likelihood approach in parameter estimation for stochastic differential equations," Computational Statistics & Data Analysis, Elsevier, vol. 84(C), pages 54-67.
    2. Theodore Simos & Mike Tsionas, 2018. "Bayesian inference of the fractional Ornstein–Uhlenbeck process under a flow sampling scheme," Computational Statistics, Springer, vol. 33(4), pages 1687-1713, December.
    3. Jonathan W Armond & Edward F Harry & Andrew D McAinsh & Nigel J Burroughs, 2015. "Inferring the Forces Controlling Metaphase Kinetochore Oscillations by Reverse Engineering System Dynamics," PLOS Computational Biology, Public Library of Science, vol. 11(11), pages 1-26, November.
    4. Golightly Andrew & Wilkinson Darren J., 2015. "Bayesian inference for Markov jump processes with informative observations," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 14(2), pages 169-188, April.
    5. Golightly, A. & Wilkinson, D.J., 2008. "Bayesian inference for nonlinear multivariate diffusion models observed with error," Computational Statistics & Data Analysis, Elsevier, vol. 52(3), pages 1674-1693, January.
    6. Chris Sherlock, 2021. "Direct statistical inference for finite Markov jump processes via the matrix exponential," Computational Statistics, Springer, vol. 36(4), pages 2863-2887, December.
    7. Mogens Bladt & Samuel Finch & Michael Sørensen, 2016. "Simulation of multivariate diffusion bridges," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 78(2), pages 343-369, March.
    8. Prasenjit Ghosh & Debdeep Pati & Anirban Bhattacharya, 2020. "Posterior Contraction Rates for Stochastic Block Models," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 82(2), pages 448-476, August.
    9. Paul Fearnhead & Vasilieos Giagos & Chris Sherlock, 2014. "Inference for reaction networks using the linear noise approximation," Biometrics, The International Biometric Society, vol. 70(2), pages 457-466, June.
    10. Libo Sun & Chihoon Lee & Jennifer A. Hoeting, 2019. "A penalized simulated maximum likelihood method to estimate parameters for SDEs with measurement error," Computational Statistics, Springer, vol. 34(2), pages 847-863, June.
    11. Colin S. Gillespie & Andrew Golightly, 2010. "Bayesian inference for generalized stochastic population growth models with application to aphids," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 59(2), pages 341-357, March.
    12. Vilda Purutçuoğlu, 2013. "Inference of the stochastic MAPK pathway by modified diffusion bridge method," Central European Journal of Operations Research, Springer;Slovak Society for Operations Research;Hungarian Operational Research Society;Czech Society for Operations Research;Österr. Gesellschaft für Operations Research (ÖGOR);Slovenian Society Informatika - Section for Operational Research;Croatian Operational Research Society, vol. 21(2), pages 415-429, March.
    13. Eugenia Koblents & Inés P. Mariño & Joaquín Míguez, 2019. "Bayesian Computation Methods for Inference in Stochastic Kinetic Models," Complexity, Hindawi, vol. 2019, pages 1-15, January.

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