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Structure and function of the global topsoil microbiome

Citations

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Cited by:

  1. Jincai Ma & Sumiya Nergui & Ziming Han & Guannan Huang & Huiru Li & Rui Zhang & Liyue Zhu & Jiafen Liao, 2019. "The Variation of the Soil Bacterial and Fungal Community Is Linked to Land Use Types in Northeast China," Sustainability, MDPI, vol. 11(12), pages 1-15, June.
  2. Ernestina Hauptfeld & Nikolaos Pappas & Sandra Iwaarden & Basten L. Snoek & Andrea Aldas-Vargas & Bas E. Dutilh & F. A. Bastiaan Meijenfeldt, 2024. "Integrating taxonomic signals from MAGs and contigs improves read annotation and taxonomic profiling of metagenomes," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
  3. Patrick Munk & Christian Brinch & Frederik Duus Møller & Thomas N. Petersen & Rene S. Hendriksen & Anne Mette Seyfarth & Jette S. Kjeldgaard & Christina Aaby Svendsen & Bram Bunnik & Fanny Berglund & , 2022. "Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
  4. Abdullah Kaviani Rad & Angelika Astaykina & Rostislav Streletskii & Yeganeh Afsharyzad & Hassan Etesami & Mehdi Zarei & Siva K. Balasundram, 2022. "An Overview of Antibiotic Resistance and Abiotic Stresses Affecting Antimicrobial Resistance in Agricultural Soils," IJERPH, MDPI, vol. 19(8), pages 1-27, April.
  5. Cong Wang & Qing-Yi Yu & Niu-Niu Ji & Yong Zheng & John W. Taylor & Liang-Dong Guo & Cheng Gao, 2023. "Bacterial genome size and gene functional diversity negatively correlate with taxonomic diversity along a pH gradient," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
  6. Tarquin Netherway & Jan Bengtsson & Franz Buegger & Joachim Fritscher & Jane Oja & Karin Pritsch & Falk Hildebrand & Eveline J. Krab & Mohammad Bahram, 2024. "Pervasive associations between dark septate endophytic fungi with tree root and soil microbiomes across Europe," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
  7. Yukun Zheng & Hongyan Liu & Huan Yang & Hongya Wang & Wenjie Zhao & Zeyu Zhang & Miao Huang & Weihang Liu, 2022. "Decoupled Asian monsoon intensity and precipitation during glacial-interglacial transitions on the Chinese Loess Plateau," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
  8. Mengxia Zhou & Hui Yang & Tongbin Zhu & Cheng Zhang & Degen Zhu, 2022. "Preliminary Research on Agricultural Cultivation Decreasing Amino Sugar Accumulation in Calcareous Soils in Subtropical Karst Region of China," Land, MDPI, vol. 11(10), pages 1-12, September.
  9. Zhenyan Zhang & Qi Zhang & Tingzhang Wang & Nuohan Xu & Tao Lu & Wenjie Hong & Josep Penuelas & Michael Gillings & Meixia Wang & Wenwen Gao & Haifeng Qian, 2022. "Assessment of global health risk of antibiotic resistance genes," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
  10. Ernest D. Osburn & Steven G. McBride & Mohammad Bahram & Michael S. Strickland, 2024. "Global patterns in the growth potential of soil bacterial communities," Nature Communications, Nature, vol. 15(1), pages 1-9, December.
  11. Samiran Banerjee & Cheng Zhao & Gina Garland & Anna Edlinger & Pablo García-Palacios & Sana Romdhane & Florine Degrune & David S. Pescador & Chantal Herzog & Lennel A. Camuy-Velez & Jordi Bascompte & , 2024. "Biotic homogenization, lower soil fungal diversity and fewer rare taxa in arable soils across Europe," Nature Communications, Nature, vol. 15(1), pages 1-10, December.
  12. Jun Li & Yan Chen & Xiangyang Qin & Aocheng Cao & Anxiang Lu, 2022. "Impact of Biochar on Rhizosphere Bacterial Diversity Restoration Following Chloropicrin Fumigation of Planted Soil," IJERPH, MDPI, vol. 19(4), pages 1-14, February.
  13. Anton M. Potapov & Carlos A. Guerra & Johan Hoogen & Anatoly Babenko & Bruno C. Bellini & Matty P. Berg & Steven L. Chown & Louis Deharveng & Ľubomír Kováč & Natalia A. Kuznetsova & Jean-François Pong, 2023. "Globally invariant metabolism but density-diversity mismatch in springtails," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
  14. Zhu, Jinjin & Niu, Wenquan & Zhang, Zhenhua & Siddique, Kadambot H.M. & Dan Sun, & Yang, Runya, 2022. "Distinct roles for soil bacterial and fungal communities associated with the availability of carbon and phosphorus under aerated drip irrigation," Agricultural Water Management, Elsevier, vol. 274(C).
  15. Howard W. Mielke & Christopher R. Gonzales & Eric T. Powell, 2019. "Curtailing Lead Aerosols: Effects of Primary Prevention on Declining Soil Lead and Children’s Blood Lead in Metropolitan New Orleans," IJERPH, MDPI, vol. 16(12), pages 1-10, June.
  16. Zi-Teng Liu & Rui-Ao Ma & Dong Zhu & Konstantinos T. Konstantinidis & Yong-Guan Zhu & Si-Yu Zhang, 2024. "Organic fertilization co-selects genetically linked antibiotic and metal(loid) resistance genes in global soil microbiome," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
  17. Mohammad Bahram & Mikk Espenberg & Jaan Pärn & Laura Lehtovirta-Morley & Sten Anslan & Kuno Kasak & Urmas Kõljalg & Jaan Liira & Martin Maddison & Mari Moora & Ülo Niinemets & Maarja Öpik & Meelis Pär, 2022. "Structure and function of the soil microbiome underlying N2O emissions from global wetlands," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
  18. Mahmoud F. Seleiman & Nasser Al-Suhaibani & Salah El-Hendawy & Kamel Abdella & Majed Alotaibi & Ali Alderfasi, 2021. "Impacts of Long- and Short-Term of Irrigation with Treated Wastewater and Synthetic Fertilizers on the Growth, Biomass, Heavy Metal Content, and Energy Traits of Three Potential Bioenergy Crops in Ari," Energies, MDPI, vol. 14(11), pages 1-22, May.
  19. Maëva Labouyrie & Cristiano Ballabio & Ferran Romero & Panos Panagos & Arwyn Jones & Marc W. Schmid & Vladimir Mikryukov & Olesya Dulya & Leho Tedersoo & Mohammad Bahram & Emanuele Lugato & Marcel G. , 2023. "Patterns in soil microbial diversity across Europe," Nature Communications, Nature, vol. 14(1), pages 1-21, December.
  20. Hu Liao & Hu Li & Chen-Song Duan & Xin-Yuan Zhou & Qiu-Ping Luo & Xin-Li An & Yong-Guan Zhu & Jian-Qiang Su, 2022. "Response of soil viral communities to land use changes," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
  21. Jie-Liang Liang & Shi-wei Feng & Jing-li Lu & Xiao-nan Wang & Feng-lin Li & Yu-qian Guo & Shen-yan Liu & Yuan-yue Zhuang & Sheng-ji Zhong & Jin Zheng & Ping Wen & Xinzhu Yi & Pu Jia & Bin Liao & Wen-s, 2024. "Hidden diversity and potential ecological function of phosphorus acquisition genes in widespread terrestrial bacteriophages," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
  22. Dong Zhao & Huping Hou & Haiya Liu & Chen Wang & Zhongyi Ding & Jinting Xiong, 2023. "Microbial Community Structure and Predictive Functional Analysis in Reclaimed Soil with Different Vegetation Types: The Example of the Xiaoyi Mine Waste Dump in Shanxi," Land, MDPI, vol. 12(2), pages 1-14, February.
  23. de la Riva, Enrique G. & Ulrich, Werner & Batáry, Péter & Baudry, Julia & Beaumelle, Léa & Bucher, Roman & Čerevková, Andrea & Felipe-Lucia, María R. & Gallé, Róbert & Kesse-Guyot, Emmanuelle & Rembia, 2023. "From functional diversity to human well-being: A conceptual framework for agroecosystem sustainability," Agricultural Systems, Elsevier, vol. 208(C).
  24. Asada, K. & Kanda, T. & Yamashita, N. & Asano, M. & Eguchi, S., 2022. "Interpreting stoichiometric homeostasis and flexibility of soil microbial biomass carbon, nitrogen, and phosphorus," Ecological Modelling, Elsevier, vol. 470(C).
  25. Wen Zhao & Yali Yin & Shixiong Li & Jingjing Liu & Yiling Dong & Shifeng Su, 2022. "Soil Microbial Community Varied with Vegetation Types on a Small Regional Scale of the Qilian Mountains," Sustainability, MDPI, vol. 14(13), pages 1-15, June.
  26. Pengfa Li & Leho Tedersoo & Thomas W. Crowther & Baozhan Wang & Yu Shi & Lu Kuang & Ting Li & Meng Wu & Ming Liu & Lu Luan & Jia Liu & Dongzhen Li & Yongxia Li & Songhan Wang & Muhammad Saleem & Alex , 2023. "Global diversity and biogeography of potential phytopathogenic fungi in a changing world," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
  27. Taimoor Hassan Farooq & Uttam Kumar & Awais Shakoor & Gadah Albasher & Saad Alkahtani & Humaira Rizwana & Muhammad Tayyab & Jalpa Dobaria & Muhammad Iftikhar Hussain & Pengfei Wu, 2021. "Influence of Intraspecific Competition Stress on Soil Fungal Diversity and Composition in Relation to Tree Growth and Soil Fertility in Sub-Tropical Soils under Chinese Fir Monoculture," Sustainability, MDPI, vol. 13(19), pages 1-18, September.
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