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Structure and function of the soil microbiome underlying N2O emissions from global wetlands

Author

Listed:
  • Mohammad Bahram

    (University of Tartu
    Swedish University of Agricultural Sciences)

  • Mikk Espenberg

    (University of Tartu)

  • Jaan Pärn

    (University of Tartu)

  • Laura Lehtovirta-Morley

    (University of East Anglia)

  • Sten Anslan

    (University of Tartu)

  • Kuno Kasak

    (University of Tartu)

  • Urmas Kõljalg

    (University of Tartu)

  • Jaan Liira

    (University of Tartu)

  • Martin Maddison

    (University of Tartu)

  • Mari Moora

    (University of Tartu)

  • Ülo Niinemets

    (Estonian University of Life Sciences)

  • Maarja Öpik

    (University of Tartu)

  • Meelis Pärtel

    (University of Tartu)

  • Kaido Soosaar

    (University of Tartu)

  • Martin Zobel

    (University of Tartu)

  • Falk Hildebrand

    (Quadram Institute Bioscience
    Earlham Institute)

  • Leho Tedersoo

    (King Saud University
    University of Tartu)

  • Ülo Mander

    (University of Tartu)

Abstract

Wetland soils are the greatest source of nitrous oxide (N2O), a critical greenhouse gas and ozone depleter released by microbes. Yet, microbial players and processes underlying the N2O emissions from wetland soils are poorly understood. Using in situ N2O measurements and by determining the structure and potential functional of microbial communities in 645 wetland soil samples globally, we examined the potential role of archaea, bacteria, and fungi in nitrogen (N) cycling and N2O emissions. We show that N2O emissions are higher in drained and warm wetland soils, and are correlated with functional diversity of microbes. We further provide evidence that despite their much lower abundance compared to bacteria, nitrifying archaeal abundance is a key factor explaining N2O emissions from wetland soils globally. Our data suggest that ongoing global warming and intensifying environmental change may boost archaeal nitrifiers, collectively transforming wetland soils to a greater source of N2O.

Suggested Citation

  • Mohammad Bahram & Mikk Espenberg & Jaan Pärn & Laura Lehtovirta-Morley & Sten Anslan & Kuno Kasak & Urmas Kõljalg & Jaan Liira & Martin Maddison & Mari Moora & Ülo Niinemets & Maarja Öpik & Meelis Pär, 2022. "Structure and function of the soil microbiome underlying N2O emissions from global wetlands," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
    • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-29161-3
    DOI: 10.1038/s41467-022-29161-3
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    References listed on IDEAS

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    1. Hanqin Tian & Rongting Xu & Josep G. Canadell & Rona L. Thompson & Wilfried Winiwarter & Parvadha Suntharalingam & Eric A. Davidson & Philippe Ciais & Robert B. Jackson & Greet Janssens-Maenhout & Mic, 2020. "A comprehensive quantification of global nitrous oxide sources and sinks," Nature, Nature, vol. 586(7828), pages 248-256, October.
    2. S. Leininger & T. Urich & M. Schloter & L. Schwark & J. Qi & G. W. Nicol & J. I. Prosser & S. C. Schuster & C. Schleper, 2006. "Archaea predominate among ammonia-oxidizing prokaryotes in soils," Nature, Nature, vol. 442(7104), pages 806-809, August.
    3. Mohammad Bahram & Falk Hildebrand & Sofia K. Forslund & Jennifer L. Anderson & Nadejda A. Soudzilovskaia & Peter M. Bodegom & Johan Bengtsson-Palme & Sten Anslan & Luis Pedro Coelho & Helery Harend & , 2018. "Structure and function of the global topsoil microbiome," Nature, Nature, vol. 560(7717), pages 233-237, August.
    4. Mark Trimmer & Panagiota-Myrsini Chronopoulou & Susanna T. Maanoja & Robert C. Upstill-Goddard & Vassilis Kitidis & Kevin J. Purdy, 2016. "Nitrous oxide as a function of oxygen and archaeal gene abundance in the North Pacific," Nature Communications, Nature, vol. 7(1), pages 1-10, December.
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    Cited by:

    1. Maoyuan Feng & Shushi Peng & Yilong Wang & Philippe Ciais & Daniel S. Goll & Jinfeng Chang & Yunting Fang & Benjamin Z. Houlton & Gang Liu & Yan Sun & Yi Xi, 2023. "Overestimated nitrogen loss from denitrification for natural terrestrial ecosystems in CMIP6 Earth System Models," Nature Communications, Nature, vol. 14(1), pages 1-9, December.

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