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Merging validation and evaluation of ecological models to ‘evaludation’: A review of terminology and a practical approach

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  1. Kevin E Jablonski & Randall B Boone & Paul J Meiman, 2018. "An agent-based model of cattle grazing toxic Geyer's larkspur," PLOS ONE, Public Library of Science, vol. 13(3), pages 1-22, March.
  2. Carrella, Ernesto & Saul, Steven & Marshall, Kristin & Burgess, Matthew G. & Cabral, Reniel B. & Bailey, Richard M. & Dorsett, Chris & Drexler, Michael & Madsen, Jens Koed & Merkl, Andreas, 2020. "Simple Adaptive Rules Describe Fishing Behaviour Better than Perfect Rationality in the US West Coast Groundfish Fishery," Ecological Economics, Elsevier, vol. 169(C).
  3. Wallentin, Gudrun, 2017. "Spatial simulation: A spatial perspective on individual-based ecology—a review," Ecological Modelling, Elsevier, vol. 350(C), pages 30-41.
  4. Honkaniemi, Juha & Ojansuu, Risto & Kasanen, Risto & Heliövaara, Kari, 2018. "Interaction of disturbance agents on Norway spruce: A mechanistic model of bark beetle dynamics integrated in simulation framework WINDROT," Ecological Modelling, Elsevier, vol. 388(C), pages 45-60.
  5. Grimm, Volker & Berger, Uta, 2016. "Robustness analysis: Deconstructing computational models for ecological theory and applications," Ecological Modelling, Elsevier, vol. 326(C), pages 162-167.
  6. Robert Huber & Hang Xiong & Kevin Keller & Robert Finger, 2022. "Bridging behavioural factors and standard bio‐economic modelling in an agent‐based modelling framework," Journal of Agricultural Economics, Wiley Blackwell, vol. 73(1), pages 35-63, February.
  7. Singer, Alexander & Johst, Karin & Banitz, Thomas & Fowler, Mike S. & Groeneveld, Jürgen & Gutiérrez, Alvaro G. & Hartig, Florian & Krug, Rainer M. & Liess, Matthias & Matlack, Glenn & Meyer, Katrin M, 2016. "Community dynamics under environmental change: How can next generation mechanistic models improve projections of species distributions?," Ecological Modelling, Elsevier, vol. 326(C), pages 63-74.
  8. King, Elizabeth G. & Franz, Trenton E., 2016. "Combining ecohydrologic and transition probability-based modeling to simulate vegetation dynamics in a semi-arid rangeland," Ecological Modelling, Elsevier, vol. 329(C), pages 41-63.
  9. van der Vaart, Elske & Beaumont, Mark A. & Johnston, Alice S.A. & Sibly, Richard M., 2015. "Calibration and evaluation of individual-based models using Approximate Bayesian Computation," Ecological Modelling, Elsevier, vol. 312(C), pages 182-190.
  10. Watson, Joseph W & Boyd, Robin & Dutta, Ritabrata & Vasdekis, Georgios & Walker, Nicola D. & Roy, Shovonlal & Everitt, Richard & Hyder, Kieran & Sibly, Richard M, 2022. "Incorporating environmental variability in a spatially-explicit individual-based model of European sea bass✰," Ecological Modelling, Elsevier, vol. 466(C).
  11. Planque, Benjamin & Aarflot, Johanna M. & Buttay, Lucie & Carroll, JoLynn & Fransner, Filippa & Hansen, Cecilie & Husson, Bérengère & Langangen, Øystein & Lindstrøm, Ulf & Pedersen, Torstein & Primice, 2022. "A standard protocol for describing the evaluation of ecological models," Ecological Modelling, Elsevier, vol. 471(C).
  12. de Wildt, Tristan E. & Boijmans, Anne R. & Chappin, Emile J.L. & Herder, Paulien M., 2021. "An ex ante assessment of value conflicts and social acceptance of sustainable heating systems," Energy Policy, Elsevier, vol. 153(C).
  13. Huber, Nica & Bugmann, Harald & Lafond, Valentine, 2018. "Global sensitivity analysis of a dynamic vegetation model: Model sensitivity depends on successional time, climate and competitive interactions," Ecological Modelling, Elsevier, vol. 368(C), pages 377-390.
  14. Grimm, Volker & Augusiak, Jacqueline & Focks, Andreas & Frank, Béatrice M. & Gabsi, Faten & Johnston, Alice S.A. & Liu, Chun & Martin, Benjamin T. & Meli, Mattia & Radchuk, Viktoriia & Thorbek, Pernil, 2014. "Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE," Ecological Modelling, Elsevier, vol. 280(C), pages 129-139.
  15. Courbaud, B. & Lafond, V. & Lagarrigues, G. & Vieilledent, G. & Cordonnier, T. & Jabot, F. & de Coligny, F., 2015. "Applying ecological model evaludation: Lessons learned with the forest dynamics model Samsara2," Ecological Modelling, Elsevier, vol. 314(C), pages 1-14.
  16. Erickson, Richard A. & Eager, Eric A. & Kocovsky, Patrick M. & Glover, David C. & Kallis, Jahn L. & Long, K.R., 2018. "A spatially discrete, integral projection model and its application to invasive carp," Ecological Modelling, Elsevier, vol. 387(C), pages 163-171.
  17. Xiaolan Wu & Xiaoyan Bu & Suocheng Dong & Yushuang Ma & Yan Ma & Yarong Ma & Yulian Liu & Haixian Wang & Xiaomin Wang & Jiarui Wang, 2023. "The Impact of Restoration and Protection Based on Sustainable Development Goals on Urban Wetland Health: A Case of Yinchuan Plain Urban Wetland Ecosystem, Ningxia, China," Sustainability, MDPI, vol. 15(16), pages 1-19, August.
  18. Gauzere, Julie & Lucas, Camille & Ronce, Ophélie & Davi, Hendrik & Chuine, Isabelle, 2019. "Sensitivity analysis of tree phenology models reveals increasing sensitivity of their predictions to winter chilling temperature and photoperiod with warming climate," Ecological Modelling, Elsevier, vol. 411(C).
  19. Martínez-López, Javier & Martínez-Fernández, Julia & Naimi, Babak & Carreño, María F. & Esteve, Miguel A., 2015. "An open-source spatio-dynamic wetland model of plant community responses to hydrological pressures," Ecological Modelling, Elsevier, vol. 306(C), pages 326-333.
  20. Schmolke, Amelie & Bartell, Steven M. & Roy, Colleen & Green, Nicholas & Galic, Nika & Brain, Richard, 2019. "Species-specific population dynamics and their link to an aquatic food web: A hybrid modeling approach," Ecological Modelling, Elsevier, vol. 405(C), pages 1-14.
  21. Erickson, Richard A. & Eager, Eric A. & Brey, Marybeth K. & Hansen, Michael J. & Kocovsky, Patrick M., 2017. "An integral projection model with YY-males and application to evaluating grass carp control," Ecological Modelling, Elsevier, vol. 361(C), pages 14-25.
  22. Grace B. Villamor & Andrew Dunningham & Philip Stahlmann-Brown & Peter W. Clinton, 2022. "Improving the Representation of Climate Change Adaptation Behaviour in New Zealand’s Forest Growing Sector," Land, MDPI, vol. 11(3), pages 1-18, March.
  23. Crouse, Kristin N. & Desai, Nisarg P. & Cassidy, Kira A. & Stahler, Erin E. & Lehman, Clarence L. & Wilson, Michael L., 2022. "Larger territories reduce mortality risk for chimpanzees, wolves, and agents: Multiple lines of evidence in a model validation framework," Ecological Modelling, Elsevier, vol. 471(C).
  24. McLane, Adam J. & Semeniuk, Christina & McDermid, Gregory J. & Tomback, Diana F. & Lorenz, Teresa & Marceau, Danielle, 2017. "Energetic behavioural-strategy prioritization of Clark’s nutcrackers in whitebark pine communities: An agent-based modeling approach," Ecological Modelling, Elsevier, vol. 354(C), pages 123-139.
  25. Grimm, Volker & Berger, Uta, 2016. "Structural realism, emergence, and predictions in next-generation ecological modelling: Synthesis from a special issue," Ecological Modelling, Elsevier, vol. 326(C), pages 177-187.
  26. Kint, V. & Aertsen, W. & Fyllas, N.M. & Trabucco, A. & Janssen, E. & Özkan, K. & Muys, B., 2014. "Ecological traits of Mediterranean tree species as a basis for modelling forest dynamics in the Taurus mountains, Turkey," Ecological Modelling, Elsevier, vol. 286(C), pages 53-65.
  27. Lett, Christophe & Barrier, Nicolas & Bahlali, Meissam, 2020. "Converging approaches for modeling the dispersal of propagules in air and sea," Ecological Modelling, Elsevier, vol. 415(C).
  28. Cartwright, Samantha J. & Bowgen, Katharine M. & Collop, Catherine & Hyder, Kieran & Nabe-Nielsen, Jacob & Stafford, Richard & Stillman, Richard A. & Thorpe, Robert B. & Sibly, Richard M., 2016. "Communicating complex ecological models to non-scientist end users," Ecological Modelling, Elsevier, vol. 338(C), pages 51-59.
  29. Boult, Victoria L. & Quaife, Tristan & Fishlock, Vicki & Moss, Cynthia J. & Lee, Phyllis C. & Sibly, Richard M., 2018. "Individual-based modelling of elephant population dynamics using remote sensing to estimate food availability," Ecological Modelling, Elsevier, vol. 387(C), pages 187-195.
  30. Guus ten Broeke & Hilde Tobi, 2021. "Mapping validity and validation in modelling for interdisciplinary research," Quality & Quantity: International Journal of Methodology, Springer, vol. 55(5), pages 1613-1630, October.
  31. Braun, A. & Rosner, H.-J. & Hagensieker, R. & Dieball, S., 2015. "Multi-method dynamical reconstruction of the ecological impact of copper mining on Chinese historical landscapes," Ecological Modelling, Elsevier, vol. 303(C), pages 42-54.
  32. Kjelland, Michael E. & Piercy, Candice D. & Swannack, Todd M., 2017. "Beyond graphs and tables: Enhancing explanatory power of complex environmental simulations through 3D printed model output," Ecological Modelling, Elsevier, vol. 360(C), pages 244-251.
  33. Dick, D.D.C. & Ayllón, D., 2017. "FloMan-MF: Floodplain Management for the Moor Frog − a simulation model for amphibian conservation in dynamic wetlands," Ecological Modelling, Elsevier, vol. 348(C), pages 110-124.
  34. Camilo Garcia-Tenorio & Gilles Delansnay & Eduardo Mojica-Nava & Alain Vande Wouwer, 2021. "Trigonometric Embeddings in Polynomial Extended Mode Decomposition—Experimental Application to an Inverted Pendulum," Mathematics, MDPI, vol. 9(10), pages 1-15, May.
  35. An, Li & Grimm, Volker & Sullivan, Abigail & Turner II, B.L. & Malleson, Nicolas & Heppenstall, Alison & Vincenot, Christian & Robinson, Derek & Ye, Xinyue & Liu, Jianguo & Lindkvist, Emilie & Tang, W, 2021. "Challenges, tasks, and opportunities in modeling agent-based complex systems," Ecological Modelling, Elsevier, vol. 457(C).
  36. Liukkonen, Lauri & Ayllón, Daniel & Kunnasranta, Mervi & Niemi, Marja & Nabe-Nielsen, Jacob & Grimm, Volker & Nyman, Anna-Maija, 2018. "Modelling movements of Saimaa ringed seals using an individual-based approach," Ecological Modelling, Elsevier, vol. 368(C), pages 321-335.
  37. Zhang, Jingjing & Dennis, Todd E. & Landers, Todd J. & Bell, Elizabeth & Perry, George L.W., 2017. "Linking individual-based and statistical inferential models in movement ecology: A case study with black petrels (Procellaria parkinsoni)," Ecological Modelling, Elsevier, vol. 360(C), pages 425-436.
  38. Troost, Christian & Huber, Robert & Bell, Andrew R. & van Delden, Hedwig & Filatova, Tatiana & Le, Quang Bao & Lippe, Melvin & Niamir, Leila & Polhill, J. Gareth & Sun, Zhanli & Berger, Thomas, 2023. "How to keep it adequate: A protocol for ensuring validity in agent-based simulation," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 159, pages 1-21.
  39. Piacenza, Susan E. & Richards, Paul M. & Heppell, Selina S., 2017. "An agent-based model to evaluate recovery times and monitoring strategies to increase accuracy of sea turtle population assessments," Ecological Modelling, Elsevier, vol. 358(C), pages 25-39.
  40. Zamponi, Virginia & O’Brien, Kevin & Jensen, Erik & Feldhaus, Brandon & Moore, Russell & Lynch, Christopher J. & Gore, Ross, 2023. "Understanding and assessing demographic (in)equity resulting from extreme heat and direct sunlight exposure due to lack of tree canopies in Norfolk, VA using agent-based modeling," Ecological Modelling, Elsevier, vol. 483(C).
  41. Stenglein, Jennifer L. & Gilbert, Jonathan H. & Wydeven, Adrian P. & Van Deelen, Timothy R., 2015. "An individual-based model for southern Lake Superior wolves: A tool to explore the effect of human-caused mortality on a landscape of risk," Ecological Modelling, Elsevier, vol. 302(C), pages 13-24.
  42. Ayllón, Daniel & Railsback, Steven F. & Vincenzi, Simone & Groeneveld, Jürgen & Almodóvar, Ana & Grimm, Volker, 2016. "InSTREAM-Gen: Modelling eco-evolutionary dynamics of trout populations under anthropogenic environmental change," Ecological Modelling, Elsevier, vol. 326(C), pages 36-53.
  43. Boyd, Robin & Roy, Shovonlal & Sibly, Richard & Thorpe, Robert & Hyder, Kieran, 2018. "A general approach to incorporating spatial and temporal variation in individual-based models of fish populations with application to Atlantic mackerel," Ecological Modelling, Elsevier, vol. 382(C), pages 9-17.
  44. Fitts, Lucia A. & Fraser, Jacob S. & Miranda, Brian R. & Domke, Grant M. & Russell, Matthew B. & Sturtevant, Brian R., 2023. "An iterative site-scale approach to calibrate and corroborate successional processes within a forest landscape model," Ecological Modelling, Elsevier, vol. 477(C).
  45. Ahmed Laatabi & Nicolas Marilleau & Tri Nguyen-Huu & Hassan Hbid & Mohamed Ait Babram, 2018. "ODD+2D: An ODD Based Protocol for Mapping Data to Empirical ABMs," Journal of Artificial Societies and Social Simulation, Journal of Artificial Societies and Social Simulation, vol. 21(2), pages 1-9.
  46. Lapp, Maya & Long, Colby, 2022. "A new approach to agent-based models of Community Resource Management based on the analysis of cheating, monitoring, and sanctioning," Ecological Modelling, Elsevier, vol. 468(C).
  47. MacPherson, Brian & Gras, Robin, 2016. "Individual-based ecological models: Adjunctive tools or experimental systems?," Ecological Modelling, Elsevier, vol. 323(C), pages 106-114.
  48. Lorscheid, Iris & Meyer, Matthias, 2016. "Divide and conquer: Configuring submodels for valid and efficient analyses of complex simulation models," Ecological Modelling, Elsevier, vol. 326(C), pages 152-161.
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