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Selecting pseudo-absence data for presence-only distribution modeling: How far should you stray from what you know?

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  1. Whitford, Anna M. & Shipley, Benjamin R. & McGuire, Jenny L., 2024. "The influence of the number and distribution of background points in presence-background species distribution models," Ecological Modelling, Elsevier, vol. 488(C).
  2. Watling, James I. & Brandt, Laura A. & Bucklin, David N. & Fujisaki, Ikuko & Mazzotti, Frank J. & Romañach, Stephanie S. & Speroterra, Carolina, 2015. "Performance metrics and variance partitioning reveal sources of uncertainty in species distribution models," Ecological Modelling, Elsevier, vol. 309, pages 48-59.
  3. Martin Godefroid & Astrid Cruaud & Jean-Pierre Rossi & Jean-Yves Rasplus, 2015. "Assessing the Risk of Invasion by Tephritid Fruit Flies: Intraspecific Divergence Matters," PLOS ONE, Public Library of Science, vol. 10(8), pages 1-19, August.
  4. Boria, Robert A. & Blois, Jessica L., 2018. "The effect of large sample sizes on ecological niche models: Analysis using a North American rodent, Peromyscus maniculatus," Ecological Modelling, Elsevier, vol. 386(C), pages 83-88.
  5. Xiaojiong Zhao & Jian Wang & Junde Su & Wei Sun & Haoxian Meng, 2021. "Research on a Biodiversity Conservation Value Assessment Method Based on Habitat Suitability of Species: A Case Study in Gansu Province, China," Sustainability, MDPI, vol. 13(6), pages 1-30, March.
  6. Kuemmerlen, Mathias & Schmalz, Britta & Guse, Björn & Cai, Qinghua & Fohrer, Nicola & Jähnig, Sonja C., 2014. "Integrating catchment properties in small scale species distribution models of stream macroinvertebrates," Ecological Modelling, Elsevier, vol. 277(C), pages 77-86.
  7. Sutton, G.F. & Martin, G.D., 2022. "Testing MaxEnt model performance in a novel geographic region using an intentionally introduced insect," Ecological Modelling, Elsevier, vol. 473(C).
  8. Hengl, Tomislav & Sierdsema, Henk & Radović, Andreja & Dilo, Arta, 2009. "Spatial prediction of species’ distributions from occurrence-only records: combining point pattern analysis, ENFA and regression-kriging," Ecological Modelling, Elsevier, vol. 220(24), pages 3499-3511.
  9. Azuaje-Rodríguez, Roxiris A. & Silva, Sofia Marques & Carlos, Caio J., 2022. "Not going with the flow: Ecological niche of a migratory seabird, the South American Tern Sterna hirundinacea," Ecological Modelling, Elsevier, vol. 463(C).
  10. Reside, April E. & Watson, Ian & VanDerWal, Jeremy & Kutt, Alex S., 2011. "Incorporating low-resolution historic species location data decreases performance of distribution models," Ecological Modelling, Elsevier, vol. 222(18), pages 3444-3448.
  11. Cao, Yong & DeWalt, R. Edward & Robinson, Jason L. & Tweddale, Tari & Hinz, Leon & Pessino, Massimo, 2013. "Using Maxent to model the historic distributions of stonefly species in Illinois streams: The effects of regularization and threshold selections," Ecological Modelling, Elsevier, vol. 259(C), pages 30-39.
  12. Herkt, K. Matthias B. & Barnikel, Günter & Skidmore, Andrew K. & Fahr, Jakob, 2016. "A high-resolution model of bat diversity and endemism for continental Africa," Ecological Modelling, Elsevier, vol. 320(C), pages 9-28.
  13. Alsamadisi, Adam G. & Tran, Liem T. & Papeş, Monica, 2020. "Employing inferences across scales: Integrating spatial data with different resolutions to enhance Maxent models," Ecological Modelling, Elsevier, vol. 415(C).
  14. Brice B Hanberry & Hong S He & Brian J Palik, 2012. "Pseudoabsence Generation Strategies for Species Distribution Models," PLOS ONE, Public Library of Science, vol. 7(8), pages 1-12, August.
  15. Amaro, George & Fidelis, Elisangela Gomes & da Silva, Ricardo Siqueira & Marchioro, Cesar Augusto, 2023. "Effect of study area extent on the potential distribution of Species: A case study with models for Raoiella indica Hirst (Acari: Tenuipalpidae)," Ecological Modelling, Elsevier, vol. 483(C).
  16. Coro, Gianpaolo & Pagano, Pasquale & Ellenbroek, Anton, 2013. "Combining simulated expert knowledge with Neural Networks to produce Ecological Niche Models for Latimeria chalumnae," Ecological Modelling, Elsevier, vol. 268(C), pages 55-63.
  17. Giovanelli, João G.R. & de Siqueira, Marinez Ferreira & Haddad, Célio F.B. & Alexandrino, João, 2010. "Modeling a spatially restricted distribution in the Neotropics: How the size of calibration area affects the performance of five presence-only methods," Ecological Modelling, Elsevier, vol. 221(2), pages 215-224.
  18. Senait D Senay & Susan P Worner & Takayoshi Ikeda, 2013. "Novel Three-Step Pseudo-Absence Selection Technique for Improved Species Distribution Modelling," PLOS ONE, Public Library of Science, vol. 8(8), pages 1-16, August.
  19. Grimmett, Liam & Whitsed, Rachel & Horta, Ana, 2020. "Presence-only species distribution models are sensitive to sample prevalence: Evaluating models using spatial prediction stability and accuracy metrics," Ecological Modelling, Elsevier, vol. 431(C).
  20. Stephanie Margarete Thomas & Nils Benjamin Tjaden & Christina Frank & Anja Jaeschke & Lukas Zipfel & Christiane Wagner-Wiening & Mirko Faber & Carl Beierkuhnlein & Klaus Stark, 2018. "Areas with High Hazard Potential for Autochthonous Transmission of Aedes albopictus -Associated Arboviruses in Germany," IJERPH, MDPI, vol. 15(6), pages 1-12, June.
  21. Christian König & Patrick Weigelt & Julian Schrader & Amanda Taylor & Jens Kattge & Holger Kreft, 2019. "Biodiversity data integration—the significance of data resolution and domain," PLOS Biology, Public Library of Science, vol. 17(3), pages 1-16, March.
  22. Saupe, E.E. & Barve, V. & Myers, C.E. & Soberón, J. & Barve, N. & Hensz, C.M. & Peterson, A.T. & Owens, H.L. & Lira-Noriega, A., 2012. "Variation in niche and distribution model performance: The need for a priori assessment of key causal factors," Ecological Modelling, Elsevier, vol. 237, pages 11-22.
  23. Jiménez, Laura & Soberón, Jorge & Christen, J. Andrés & Soto, Desireé, 2019. "On the problem of modeling a fundamental niche from occurrence data," Ecological Modelling, Elsevier, vol. 397(C), pages 74-83.
  24. Zeng, Yiwen & Low, Bi Wei & Yeo, Darren C.J., 2016. "Novel methods to select environmental variables in MaxEnt: A case study using invasive crayfish," Ecological Modelling, Elsevier, vol. 341(C), pages 5-13.
  25. Liang, Wanwan & Papeş, Monica & Tran, Liem & Grant, Jerome & Washington-Allen, Robert & Stewart, Scott & Wiggins, Gregory, 2018. "The effect of pseudo-absence selection method on transferability of species distribution models in the context of non-adaptive niche shift," Ecological Modelling, Elsevier, vol. 388(C), pages 1-9.
  26. Sillero, Neftalí & Arenas-Castro, Salvador & Enriquez‐Urzelai, Urtzi & Vale, Cândida Gomes & Sousa-Guedes, Diana & Martínez-Freiría, Fernando & Real, Raimundo & Barbosa, A.Márcia, 2021. "Want to model a species niche? A step-by-step guideline on correlative ecological niche modelling," Ecological Modelling, Elsevier, vol. 456(C).
  27. Jarnevich, Catherine S. & Talbert, Marian & Morisette, Jeffery & Aldridge, Cameron & Brown, Cynthia S. & Kumar, Sunil & Manier, Daniel & Talbert, Colin & Holcombe, Tracy, 2017. "Minimizing effects of methodological decisions on interpretation and prediction in species distribution studies: An example with background selection," Ecological Modelling, Elsevier, vol. 363(C), pages 48-56.
  28. Christian Bunn & Peter Läderach & Oriana Ovalle Rivera & Dieter Kirschke, 2015. "A bitter cup: climate change profile of global production of Arabica and Robusta coffee," Climatic Change, Springer, vol. 129(1), pages 89-101, March.
  29. Pelayo Acevedo & Alberto Jiménez-Valverde & Jorge M. Lobo & Raimundo Real, 2017. "Predictor weighting and geographical background delimitation: two synergetic sources of uncertainty when assessing species sensitivity to climate change," Climatic Change, Springer, vol. 145(1), pages 131-143, November.
  30. Peter Läderach & Julian Ramirez–Villegas & Carlos Navarro-Racines & Carlos Zelaya & Armando Martinez–Valle & Andy Jarvis, 2017. "Climate change adaptation of coffee production in space and time," Climatic Change, Springer, vol. 141(1), pages 47-62, March.
  31. Marchetto, Elisa & Da Re, Daniele & Tordoni, Enrico & Bazzichetto, Manuele & Zannini, Piero & Celebrin, Simone & Chieffallo, Ludovico & Malavasi, Marco & Rocchini, Duccio, 2023. "Testing the effect of sample prevalence and sampling methods on probability- and favourability-based SDMs," Ecological Modelling, Elsevier, vol. 477(C).
  32. Catarina Rato & David James Harris & Ana Perera & Silvia B Carvalho & Miguel A Carretero & Dennis Rödder, 2015. "A Combination of Divergence and Conservatism in the Niche Evolution of the Moorish Gecko, Tarentola mauritanica (Gekkota: Phyllodactylidae)," PLOS ONE, Public Library of Science, vol. 10(5), pages 1-16, May.
  33. Stokland, Jogeir N. & Halvorsen, Rune & Støa, Bente, 2011. "Species distribution modelling—Effect of design and sample size of pseudo-absence observations," Ecological Modelling, Elsevier, vol. 222(11), pages 1800-1809.
  34. Ben Wielstra & Wouter Beukema & Jan W Arntzen & Andrew K Skidmore & Albertus G Toxopeus & Niels Raes, 2012. "Corresponding Mitochondrial DNA and Niche Divergence for Crested Newt Candidate Species," PLOS ONE, Public Library of Science, vol. 7(9), pages 1-5, September.
  35. Lucas Kruger, 2018. "Population Estimates of Trindade Petrel (Pterodroma arminjoniana) by Ensemble Nesting Habitat Modelling," International Journal of Environmental Sciences & Natural Resources, Juniper Publishers Inc., vol. 10(4), pages 145-157, April.
  36. Domisch, Sami & Kuemmerlen, Mathias & Jähnig, Sonja C. & Haase, Peter, 2013. "Choice of study area and predictors affect habitat suitability projections, but not the performance of species distribution models of stream biota," Ecological Modelling, Elsevier, vol. 257(C), pages 1-10.
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