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Statistical modelling of individual animal movement: an overview of key methods and a discussion of practical challenges

Author

Listed:
  • Toby A. Patterson

    (CSIRO Oceans and Atmosphere)

  • Alison Parton

    (University of Sheffield)

  • Roland Langrock

    (Bielefeld University)

  • Paul G. Blackwell

    (University of Sheffield)

  • Len Thomas

    (University of St Andrews)

  • Ruth King

    (University of Edinburgh)

Abstract

With the influx of complex and detailed tracking data gathered from electronic tracking devices, the analysis of animal movement data has recently emerged as a cottage industry among biostatisticians. New approaches of ever greater complexity are continue to be added to the literature. In this paper, we review what we believe to be some of the most popular and most useful classes of statistical models used to analyse individual animal movement data. Specifically, we consider discrete-time hidden Markov models, more general state-space models and diffusion processes. We argue that these models should be core components in the toolbox for quantitative researchers working on stochastic modelling of individual animal movement. The paper concludes by offering some general observations on the direction of statistical analysis of animal movement. There is a trend in movement ecology towards what are arguably overly complex modelling approaches which are inaccessible to ecologists, unwieldy with large data sets or not based on mainstream statistical practice. Additionally, some analysis methods developed within the ecological community ignore fundamental properties of movement data, potentially leading to misleading conclusions about animal movement. Corresponding approaches, e.g. based on Lévy walk-type models, continue to be popular despite having been largely discredited. We contend that there is a need for an appropriate balance between the extremes of either being overly complex or being overly simplistic, whereby the discipline relies on models of intermediate complexity that are usable by general ecologists, but grounded in well-developed statistical practice and efficient to fit to large data sets.

Suggested Citation

  • Toby A. Patterson & Alison Parton & Roland Langrock & Paul G. Blackwell & Len Thomas & Ruth King, 2017. "Statistical modelling of individual animal movement: an overview of key methods and a discussion of practical challenges," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 101(4), pages 399-438, October.
  • Handle: RePEc:spr:alstar:v:101:y:2017:i:4:d:10.1007_s10182-017-0302-7
    DOI: 10.1007/s10182-017-0302-7
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    3. Ethan Lawler & Kim Whoriskey & William H. Aeberhard & Chris Field & Joanna Mills Flemming, 2019. "The Conditionally Autoregressive Hidden Markov Model (CarHMM): Inferring Behavioural States from Animal Tracking Data Exhibiting Conditional Autocorrelation," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 24(4), pages 651-668, December.
    4. Toryn L. J. Schafer & Christopher K. Wikle & Jay A. VonBank & Bart M. Ballard & Mitch D. Weegman, 2020. "A Bayesian Markov Model with Pólya-Gamma Sampling for Estimating Individual Behavior Transition Probabilities from Accelerometer Classifications," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 25(3), pages 365-382, September.
    5. Michael A. Spence & Evalyne W. Muiruri & David L. Maxwell & Scott Davis & Dave Sheahan, 2021. "The application of continuous‐time Markov chain models in the analysis of choice flume experiments," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 70(4), pages 1103-1123, August.
    6. Antonello Maruotti & Antonio Punzo, 2021. "Initialization of Hidden Markov and Semi‐Markov Models: A Critical Evaluation of Several Strategies," International Statistical Review, International Statistical Institute, vol. 89(3), pages 447-480, December.
    7. Panagiotis Besbeas & Byron J. T. Morgan, 2017. "Variance estimation for integrated population models," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 101(4), pages 439-460, October.
    8. Roland Langrock & David L. Borchers, 2017. "Guest editors’ introduction to the special issue on “Ecological Statistics”," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 101(4), pages 345-347, October.
    9. Mevin B. Hooten & Ruth King & Roland Langrock, 2017. "Guest Editor’s Introduction to the Special Issue on “Animal Movement Modeling”," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 22(3), pages 224-231, September.
    10. Joy, Ruth & Schick, Robert S. & Dowd, Michael & Margolina, Tetyana & Joseph, John E. & Thomas, Len, 2022. "A fine-scale marine mammal movement model for assessing long-term aggregate noise exposure," Ecological Modelling, Elsevier, vol. 464(C).

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