IDEAS home Printed from https://ideas.repec.org/a/plo/pone00/0168838.html
   My bibliography  Save this article

Comparison of Criteria for Choosing the Number of Classes in Bayesian Finite Mixture Models

Author

Listed:
  • Kazem Nasserinejad
  • Joost van Rosmalen
  • Wim de Kort
  • Emmanuel Lesaffre

Abstract

Identifying the number of classes in Bayesian finite mixture models is a challenging problem. Several criteria have been proposed, such as adaptations of the deviance information criterion, marginal likelihoods, Bayes factors, and reversible jump MCMC techniques. It was recently shown that in overfitted mixture models, the overfitted latent classes will asymptotically become empty under specific conditions for the prior of the class proportions. This result may be used to construct a criterion for finding the true number of latent classes, based on the removal of latent classes that have negligible proportions. Unlike some alternative criteria, this criterion can easily be implemented in complex statistical models such as latent class mixed-effects models and multivariate mixture models using standard Bayesian software. We performed an extensive simulation study to develop practical guidelines to determine the appropriate number of latent classes based on the posterior distribution of the class proportions, and to compare this criterion with alternative criteria. The performance of the proposed criterion is illustrated using a data set of repeatedly measured hemoglobin values of blood donors.

Suggested Citation

  • Kazem Nasserinejad & Joost van Rosmalen & Wim de Kort & Emmanuel Lesaffre, 2017. "Comparison of Criteria for Choosing the Number of Classes in Bayesian Finite Mixture Models," PLOS ONE, Public Library of Science, vol. 12(1), pages 1-23, January.
  • Handle: RePEc:plo:pone00:0168838
    DOI: 10.1371/journal.pone.0168838
    as

    Download full text from publisher

    File URL: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0168838
    Download Restriction: no

    File URL: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0168838&type=printable
    Download Restriction: no

    File URL: https://libkey.io/10.1371/journal.pone.0168838?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Sylvia. Richardson & Peter J. Green, 1997. "On Bayesian Analysis of Mixtures with an Unknown Number of Components (with discussion)," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 59(4), pages 731-792.
    2. Jia-Chiun Pan & Guan-Hua Huang, 2014. "Bayesian Inferences of Latent Class Models with an Unknown Number of Classes," Psychometrika, Springer;The Psychometric Society, vol. 79(4), pages 621-646, October.
    3. repec:dau:papers:123456789/4648 is not listed on IDEAS
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Singh, Jyotsna & Homem de Almeida Correia, Gonçalo & van Wee, Bert & Barbour, Natalia, 2023. "Change in departure time for a train trip to avoid crowding during the COVID-19 pandemic: A latent class study in the Netherlands," Transportation Research Part A: Policy and Practice, Elsevier, vol. 170(C).
    2. Christian Grovermann & Sylvain Quiédeville & Adrian Muller & Florian Leiber & Matthias Stolze & Simon Moakes, 2021. "Does organic certification make economic sense for dairy farmers in Europe?–A latent class counterfactual analysis," Agricultural Economics, International Association of Agricultural Economists, vol. 52(6), pages 1001-1012, November.
    3. Yinghan Chen & Steven Andrew Culpepper & Yuguo Chen, 2023. "Bayesian Inference for an Unknown Number of Attributes in Restricted Latent Class Models," Psychometrika, Springer;The Psychometric Society, vol. 88(2), pages 613-635, June.
    4. Frasquet, Marta & Ieva, Marco & Ziliani, Cristina, 2021. "Online channel adoption in supermarket retailing," Journal of Retailing and Consumer Services, Elsevier, vol. 59(C).
    5. Cato Waeterloos & Peter Conradie & Michel Walrave & Koen Ponnet, 2021. "Digital Issue Movements: Political Repertoires and Drivers of Participation among Belgian Youth in the Context of ‘School Strike for Climate’," Sustainability, MDPI, vol. 13(17), pages 1-19, September.
    6. Zachary K. Collier & Haobai Zhang & Bridgette Johnson, 2021. "Finite Mixture Modeling for Program Evaluation: Resampling and Pre-processing Approaches," Evaluation Review, , vol. 45(6), pages 309-333, December.
    7. K C Flórez & A Corberán-Vallet & A Iftimi & J D Bermúdez, 2020. "A Bayesian unified framework for risk estimation and cluster identification in small area health data analysis," PLOS ONE, Public Library of Science, vol. 15(5), pages 1-17, May.
    8. Tabea Feseker & Timo Gnambs & Cordula Artelt, 2021. "Setting a standard for low reading proficiency: A comparison of the bookmark procedure and constrained mixture Rasch model," PLOS ONE, Public Library of Science, vol. 16(11), pages 1-22, November.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Lee, Jung Wun & Chung, Hwan & Jeon, Saebom, 2021. "Bayesian multivariate latent class profile analysis: Exploring the developmental progression of youth depression and substance use," Computational Statistics & Data Analysis, Elsevier, vol. 161(C).
    2. Shuang Zhang & Xingdong Feng, 2022. "Distributed identification of heterogeneous treatment effects," Computational Statistics, Springer, vol. 37(1), pages 57-89, March.
    3. Aldo M. Garay & Francyelle L. Medina & Suelem Torres de Freitas & Víctor H. Lachos, 2024. "Bayesian analysis of linear regression models with autoregressive symmetrical errors and incomplete data," Statistical Papers, Springer, vol. 65(9), pages 5649-5690, December.
    4. N. T. Longford & Pierpaolo D'Urso, 2011. "Mixture models with an improper component," Journal of Applied Statistics, Taylor & Francis Journals, vol. 38(11), pages 2511-2521, January.
    5. Conti, Gabriella & Frühwirth-Schnatter, Sylvia & Heckman, James J. & Piatek, Rémi, 2014. "Bayesian exploratory factor analysis," Journal of Econometrics, Elsevier, vol. 183(1), pages 31-57.
    6. Zhengyi Zhou & David S. Matteson & Dawn B. Woodard & Shane G. Henderson & Athanasios C. Micheas, 2015. "A Spatio-Temporal Point Process Model for Ambulance Demand," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(509), pages 6-15, March.
    7. Francisco Richter & Bart Haegeman & Rampal S. Etienne & Ernst C. Wit, 2020. "Introducing a general class of species diversification models for phylogenetic trees," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 74(3), pages 261-274, August.
    8. Nalini Ravishanker & Dipak K. Dey, 2000. "Multivariate Survival Models with a Mixture of Positive Stable Frailties," Methodology and Computing in Applied Probability, Springer, vol. 2(3), pages 293-308, September.
    9. Yasutomo Murasawa, 2020. "Measuring public inflation perceptions and expectations in the UK," Empirical Economics, Springer, vol. 59(1), pages 315-344, July.
    10. Minjung Kyung & Ju-Hyun Park & Ji Yeh Choi, 2022. "Bayesian Mixture Model of Extended Redundancy Analysis," Psychometrika, Springer;The Psychometric Society, vol. 87(3), pages 946-966, September.
    11. Luigi Spezia, 2019. "Modelling covariance matrices by the trigonometric separation strategy with application to hidden Markov models," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 28(2), pages 399-422, June.
    12. Michael E. Sobel & Bengt Muthén, 2012. "Compliance Mixture Modelling with a Zero-Effect Complier Class and Missing Data," Biometrics, The International Biometric Society, vol. 68(4), pages 1037-1045, December.
    13. Rosychuk, Rhonda J. & Shofiqul Islam, 2009. "Parameter estimation in a model for misclassified Markov data -- a Bayesian approach," Computational Statistics & Data Analysis, Elsevier, vol. 53(11), pages 3805-3816, September.
    14. Hlouskova, Jaroslava & Sögner, Leopold, 2020. "GMM estimation of affine term structure models," Econometrics and Statistics, Elsevier, vol. 13(C), pages 2-15.
    15. Yuan Fang & Dimitris Karlis & Sanjeena Subedi, 2022. "Infinite Mixtures of Multivariate Normal-Inverse Gaussian Distributions for Clustering of Skewed Data," Journal of Classification, Springer;The Classification Society, vol. 39(3), pages 510-552, November.
    16. Kazuhiko Kakamu, 2022. "Bayesian analysis of mixtures of lognormal distribution with an unknown number of components from grouped data," Papers 2210.05115, arXiv.org, revised Sep 2023.
    17. Hwan Chung & Brian P. Flaherty & Joseph L. Schafer, 2006. "Latent class logistic regression: application to marijuana use and attitudes among high school seniors," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 169(4), pages 723-743, October.
    18. Aurore Lomet & Gérard Govaert & Yves Grandvalet, 2018. "Model selection for Gaussian latent block clustering with the integrated classification likelihood," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 12(3), pages 489-508, September.
    19. Raymond J. Carroll & Kathryn Roeder & Larry Wasserman, 1999. "Flexible Parametric Measurement Error Models," Biometrics, The International Biometric Society, vol. 55(1), pages 44-54, March.
    20. N. K. Unnikrishnan, 2004. "Bayesian Subset Model Selection for Time Series," Journal of Time Series Analysis, Wiley Blackwell, vol. 25(5), pages 671-690, September.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:plo:pone00:0168838. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: plosone (email available below). General contact details of provider: https://journals.plos.org/plosone/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.