IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v13y2022i1d10.1038_s41467-022-30928-x.html
   My bibliography  Save this article

Dynamic mRNA degradome analyses indicate a role of histone H3K4 trimethylation in association with meiosis-coupled mRNA decay in oocyte aging

Author

Listed:
  • Yun-Wen Wu

    (MOE Key Laboratory for Biosystems Homeostasis & Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University)

  • Sen Li

    (Fertility Preservation Laboratory, Reproductive Medicine Center, Guangdong Second Provincial General Hospital)

  • Wei Zheng

    (Research Center for Reproduction and Genetics in Hunan Province, Reproductive and Genetic Hospital of CITIC-XIANGYA)

  • Yan-Chu Li

    (Fertility Preservation Laboratory, Reproductive Medicine Center, Guangdong Second Provincial General Hospital
    The Second School of Clinical Medicine, Southern Medical University)

  • Lu Chen

    (MOE Key Laboratory for Biosystems Homeostasis & Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University)

  • Yong Zhou

    (Fertility Preservation Laboratory, Reproductive Medicine Center, Guangdong Second Provincial General Hospital)

  • Zuo-Qi Deng

    (MOE Key Laboratory for Biosystems Homeostasis & Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University)

  • Ge Lin

    (Research Center for Reproduction and Genetics in Hunan Province, Reproductive and Genetic Hospital of CITIC-XIANGYA)

  • Heng-Yu Fan

    (MOE Key Laboratory for Biosystems Homeostasis & Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University)

  • Qian-Qian Sha

    (Fertility Preservation Laboratory, Reproductive Medicine Center, Guangdong Second Provincial General Hospital
    School of Basic Medical Sciences, Southern Medical University)

Abstract

A decrease in oocyte developmental potential is a major obstacle for successful pregnancy in women of advanced age. However, the age-related epigenetic modifications associated with dynamic transcriptome changes, particularly meiotic maturation-coupled mRNA clearance, have not been adequately characterized in human oocytes. This study demonstrates a decreased storage of transcripts encoding key factors regulating the maternal mRNA degradome in fully grown oocytes of women of advanced age. A similar defect in meiotic maturation-triggered mRNA clearance is also detected in aged mouse oocytes. Mechanistically, the epigenetic and cytoplasmic aspects of oocyte maturation are synchronized in both the normal development and aging processes. The level of histone H3K4 trimethylation (H3K4me3) is high in fully grown mouse and human oocytes derived from young females but decreased during aging due to the decreased expression of epigenetic factors responsible for H3K4me3 accumulation. Oocyte-specific knockout of the gene encoding CxxC-finger protein 1 (CXXC1), a DNA-binding subunit of SETD1 methyltransferase, causes ooplasm changes associated with accelerated aging and impaired maternal mRNA translation and degradation. These results suggest that a network of CXXC1-maintained H3K4me3, in association with mRNA decay competence, sets a timer for oocyte deterioration and plays a role in oocyte aging in both mouse and human oocytes.

Suggested Citation

  • Yun-Wen Wu & Sen Li & Wei Zheng & Yan-Chu Li & Lu Chen & Yong Zhou & Zuo-Qi Deng & Ge Lin & Heng-Yu Fan & Qian-Qian Sha, 2022. "Dynamic mRNA degradome analyses indicate a role of histone H3K4 trimethylation in association with meiosis-coupled mRNA decay in oocyte aging," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-30928-x
    DOI: 10.1038/s41467-022-30928-x
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-022-30928-x
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-022-30928-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. John Arne Dahl & Inkyung Jung & HÃ¥vard Aanes & Gareth D. Greggains & Adeel Manaf & Mads Lerdrup & Guoqiang Li & Samantha Kuan & Bin Li & Ah Young Lee & Sebastian Preissl & Ingunn Jermstad & Mads Haugl, 2016. "Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition," Nature, Nature, vol. 537(7621), pages 548-552, September.
    2. Ibtissem Nabti & Rosanna Grimes & Hema Sarna & Petros Marangos & John Carroll, 2017. "Maternal age-dependent APC/C-mediated decrease in securin causes premature sister chromatid separation in meiosis II," Nature Communications, Nature, vol. 8(1), pages 1-9, August.
    3. Qian-Qian Sha & Wei Zheng & Yun-Wen Wu & Sen Li & Lei Guo & Shuoping Zhang & Ge Lin & Xiang-Hong Ou & Heng-Yu Fan, 2020. "Dynamics and clinical relevance of maternal mRNA clearance during the oocyte-to-embryo transition in humans," Nature Communications, Nature, vol. 11(1), pages 1-16, December.
    4. Qian-Qian Sha & Xing-Xing Dai & Jun-Chao Jiang & Chao Yu & Yu Jiang & Junping Liu & Xiang-Hong Ou & Song-Ying Zhang & Heng-Yu Fan, 2018. "CFP1 coordinates histone H3 lysine-4 trimethylation and meiotic cell cycle progression in mouse oocytes," Nature Communications, Nature, vol. 9(1), pages 1-17, December.
    5. Xiaoyu Liu & Chenfei Wang & Wenqiang Liu & Jingyi Li & Chong Li & Xiaochen Kou & Jiayu Chen & Yanhong Zhao & Haibo Gao & Hong Wang & Yong Zhang & Yawei Gao & Shaorong Gao, 2016. "Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos," Nature, Nature, vol. 537(7621), pages 558-562, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Ariane Lismer & Sarah Kimmins, 2023. "Emerging evidence that the mammalian sperm epigenome serves as a template for embryo development," Nature Communications, Nature, vol. 14(1), pages 1-22, December.
    2. Denis Torre & Nancy J. Francoeur & Yael Kalma & Ilana Gross Carmel & Betsaida S. Melo & Gintaras Deikus & Kimaada Allette & Ron Flohr & Maya Fridrikh & Konstantinos Vlachos & Kent Madrid & Hardik Shah, 2023. "Isoform-resolved transcriptome of the human preimplantation embryo," Nature Communications, Nature, vol. 14(1), pages 1-23, December.
    3. Jason Alexander Halliwell & Javier Martin-Gonzalez & Adnan Hashim & John Arne Dahl & Eva R. Hoffmann & Mads Lerdrup, 2024. "Sex-specific DNA-replication in the early mammalian embryo," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    4. Marco D. Carpenter & Delaney K. Fischer & Shuo Zhang & Allison M. Bond & Kyle S. Czarnecki & Morgan T. Woolf & Hongjun Song & Elizabeth A. Heller, 2022. "Cell-type specific profiling of histone post-translational modifications in the adult mouse striatum," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
    5. Dafne Ibarra-Morales & Michael Rauer & Piergiuseppe Quarato & Leily Rabbani & Fides Zenk & Mariana Schulte-Sasse & Francesco Cardamone & Alejandro Gomez-Auli & Germano Cecere & Nicola Iovino, 2021. "Histone variant H2A.Z regulates zygotic genome activation," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    6. Pedro L. Baldoni & Naim U. Rashid & Joseph G. Ibrahim, 2022. "Efficient detection and classification of epigenomic changes under multiple conditions," Biometrics, The International Biometric Society, vol. 78(3), pages 1141-1154, September.
    7. Nozomi Takahashi & Federica Franciosi & Enrico Maria Daldello & Xuan G. Luong & Peter Althoff & Xiaotian Wang & Marco Conti, 2023. "CPEB1-dependent disruption of the mRNA translation program in oocytes during maternal aging," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    8. Cheng-Jie Zhou & Xing-Yue Wang & Yan-Hua Dong & Dong-Hui Wang & Zhe Han & Xiao-Jie Zhang & Qing-Yuan Sun & John Carroll & Cheng-Guang Liang, 2022. "CENP-F-dependent DRP1 function regulates APC/C activity during oocyte meiosis I," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
    9. Xuemeng Zhou & Tsz Wing Sam & Ah Young Lee & Danny Leung, 2021. "Mouse strain-specific polymorphic provirus functions as cis-regulatory element leading to epigenomic and transcriptomic variations," Nature Communications, Nature, vol. 12(1), pages 1-18, December.
    10. Xiaoqing Nie & Qianhua Xu & Chengpeng Xu & Fengling Chen & Qizhi Wang & Dandan Qin & Rui Wang & Zheng Gao & Xukun Lu & Xinai Yang & Yu Wu & Chen Gu & Wei Xie & Lei Li, 2023. "Maternal TDP-43 interacts with RNA Pol II and regulates zygotic genome activation," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
    11. Natalia Benetti & Quentin Gouil & Andres Tapia del Fierro & Tamara Beck & Kelsey Breslin & Andrew Keniry & Edwina McGlinn & Marnie E. Blewitt, 2022. "Maternal SMCHD1 regulates Hox gene expression and patterning in the mouse embryo," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
    12. Seung Chel Yang & Mira Park & Kwon-Ho Hong & Hyeonwoo La & Chanhyeok Park & Peike Wang & Gaizhen Li & Qionghua Chen & Youngsok Choi & Francesco J. DeMayo & John P. Lydon & David G. Skalnik & Hyunjung , 2023. "CFP1 governs uterine epigenetic landscapes to intervene in progesterone responses for uterine physiology and suppression of endometriosis," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
    13. Wenmin Sun & Dan Xiong & Jiamin Ouyang & Xueshan Xiao & Yi Jiang & Yingwei Wang & Shiqiang Li & Ziying Xie & Junwen Wang & Zhonghui Tang & Qingjiong Zhang, 2024. "Altered chromatin topologies caused by balanced chromosomal translocation lead to central iris hypoplasia," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    14. Jue Zhang & Shuai-Bo Pi & Nan Zhang & Jing Guo & Wei Zheng & Lizhi Leng & Ge Lin & Heng-Yu Fan, 2022. "Translation regulatory factor BZW1 regulates preimplantation embryo development and compaction by restricting global non-AUG Initiation," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    15. Nazifa Ahmed Moumi & Badhan Das & Zarin Tasnim Promi & Nishat Anjum Bristy & Md Shamsuzzoha Bayzid, 2019. "Quartet-based inference of cell differentiation trees from ChIP-Seq histone modification data," PLOS ONE, Public Library of Science, vol. 14(9), pages 1-25, September.
    16. Hua Yu & Zhen Sun & Tianyu Tan & Hongru Pan & Jing Zhao & Ling Zhang & Jiayu Chen & Anhua Lei & Yuqing Zhu & Lang Chen & Yuyan Xu & Yaxin Liu & Ming Chen & Jinghao Sheng & Zhengping Xu & Pengxu Qian &, 2021. "rRNA biogenesis regulates mouse 2C-like state by 3D structure reorganization of peri-nucleolar heterochromatin," Nature Communications, Nature, vol. 12(1), pages 1-21, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-30928-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.