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Genetic Analysis Implicates Dysregulation of SHANK2 in Renal Cell Carcinoma Progression

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  • Chi-Fen Chang

    (Department of Anatomy, School of Medicine, China Medical University, Taichung 406, Taiwan)

  • Shu-Pin Huang

    (Department of Urology, Kaohsiung Medical University Hospital, Kaohsiung 807, Taiwan
    Graduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan
    Department of Urology, Faculty of Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan
    Ph.D. Program in Environmental and Occupational Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan)

  • Yu-Mei Hsueh

    (Department of Family Medicine, Wan Fang Hospital, Taipei Medical University, Taipei 116, Taiwan
    Department of Public Health, School of Medicine, College of Medicine, Taipei Medical University, Taipei 110, Taiwan)

  • Jiun-Hung Geng

    (Department of Urology, Kaohsiung Medical University Hospital, Kaohsiung 807, Taiwan
    Graduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan
    Department of Urology, Kaohsiung Municipal Hsiao-Kang Hospital, Kaohsiung 812, Taiwan)

  • Chao-Yuan Huang

    (Department of Urology, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei 100, Taiwan)

  • Bo-Ying Bao

    (Department of Pharmacy, China Medical University, Taichung 406, Taiwan
    Sex Hormone Research Center, China Medical University Hospital, Taichung 404, Taiwan
    Department of Nursing, Asia University, Taichung 413, Taiwan)

Abstract

SH3 and multiple ankyrin repeat domains (SHANK) is a family of scaffold proteins that were first identified to be involved in balancing synaptic transmission via regulation of intracellular signalling crosstalk and have been linked to various cancers. However, the role of the SHANK genes in renal cell carcinoma (RCC) remains to be elucidated. In this study, we aimed to evaluate whether genetic variants in SHANK family genes affect the risk of RCC and survival of patients. A genetic association study was conducted using logistic regression and Cox regression analyses, followed by the correction for a false discovery rate (FDR), in 630 patients with RCC and controls. A pooled analysis was further performed to summarise the clinical relevance of SHANK gene expression in RCC. After adjustment for known risk factors and the FDR, the SHANK2 rs10792565 T allele was found to be associated with an increased risk of RCC (adjusted odds ratio = 1.79, 95% confidence interval = 1.32–2.44, p = 1.96 × 10 −4 , q = 0.030), whereas no significant association was found with RCC survival. A pooled analysis of 19 independent studies, comprising 1509 RCC and 414 adjacent normal tissues, showed that the expression of SHANK2 was significantly lower in RCC than in normal tissues ( p < 0.001). Furthermore, low expression of SHANK2 was correlated with an advanced stage and poor prognosis for patients with clear cell and papillary RCC. This study suggests that SHANK2 rs10792565 is associated with an increased risk of RCC and that SHANK2 may play a role in RCC progression.

Suggested Citation

  • Chi-Fen Chang & Shu-Pin Huang & Yu-Mei Hsueh & Jiun-Hung Geng & Chao-Yuan Huang & Bo-Ying Bao, 2022. "Genetic Analysis Implicates Dysregulation of SHANK2 in Renal Cell Carcinoma Progression," IJERPH, MDPI, vol. 19(19), pages 1-9, September.
  • Handle: RePEc:gam:jijerp:v:19:y:2022:i:19:p:12471-:d:929948
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    References listed on IDEAS

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