IDEAS home Printed from https://ideas.repec.org/a/gam/jijerp/v17y2020i13p4872-d381114.html
   My bibliography  Save this article

Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea

Author

Listed:
  • Seungwon Jung

    (School of Electrical Engineering, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul 02841, Korea)

  • Jaeuk Moon

    (School of Electrical Engineering, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul 02841, Korea)

  • Eenjun Hwang

    (School of Electrical Engineering, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul 02841, Korea)

Abstract

For a long time, various epidemics, such as lower respiratory infections and diarrheal diseases, have caused serious social losses and costs. Various methods for analyzing infectious disease occurrences have been proposed for effective prevention and proactive response to reduce such losses and costs. However, the results of the occurrence analyses were limited because numerous factors affect the outbreak of infectious diseases and there are complex interactions between these factors. To alleviate this limitation, we propose a cluster-based analysis scheme of infectious disease occurrences that can discover commonalities or differences between clusters by grouping elements with similar occurrence patterns. To do this, we collect and preprocess infectious disease occurrence data according to time, region, and disease. Then, we construct a tensor for the data and apply Tucker decomposition to extract latent features in the dimensions of time, region, and disease. Based on these latent features, we conduct k-means clustering and analyze the results for each dimension. To demonstrate the effectiveness of this scheme, we conduct a case study on data from South Korea and report some of the results.

Suggested Citation

  • Seungwon Jung & Jaeuk Moon & Eenjun Hwang, 2020. "Cluster-Based Analysis of Infectious Disease Occurrences Using Tensor Decomposition: A Case Study of South Korea," IJERPH, MDPI, vol. 17(13), pages 1-19, July.
  • Handle: RePEc:gam:jijerp:v:17:y:2020:i:13:p:4872-:d:381114
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/1660-4601/17/13/4872/pdf
    Download Restriction: no

    File URL: https://www.mdpi.com/1660-4601/17/13/4872/
    Download Restriction: no
    ---><---

    References listed on IDEAS

    as
    1. Yu Zhang & Jiayu Wu & Chunyao Zhou & Qingyu Zhang, 2019. "Installation Planning in Regional Thermal Power Industry for Emissions Reduction Based on an Emissions Inventory," IJERPH, MDPI, vol. 16(6), pages 1-13, March.
    2. Yordan P Raykov & Alexis Boukouvalas & Fahd Baig & Max A Little, 2016. "What to Do When K-Means Clustering Fails: A Simple yet Principled Alternative Algorithm," PLOS ONE, Public Library of Science, vol. 11(9), pages 1-28, September.
    3. Amy Wesolowski & Elisabeth zu Erbach-Schoenberg & Andrew J. Tatem & Christopher Lourenço & Cecile Viboud & Vivek Charu & Nathan Eagle & Kenth Engø-Monsen & Taimur Qureshi & Caroline O. Buckee & C. J. , 2017. "Multinational patterns of seasonal asymmetry in human movement influence infectious disease dynamics," Nature Communications, Nature, vol. 8(1), pages 1-9, December.
    4. Nan Wang & Shanwu Sun & Dantong OuYang, 2018. "Business Process Modeling Abstraction Based on Semi-Supervised Clustering Analysis," Business & Information Systems Engineering: The International Journal of WIRTSCHAFTSINFORMATIK, Springer;Gesellschaft für Informatik e.V. (GI), vol. 60(6), pages 525-542, December.
    5. Lin Wang & Joseph T. Wu, 2018. "Characterizing the dynamics underlying global spread of epidemics," Nature Communications, Nature, vol. 9(1), pages 1-11, December.
    6. Xavier Rodó & Mercedes Pascual & Francisco Doblas-Reyes & Alexander Gershunov & Dáithí Stone & Filippo Giorgi & Peter Hudson & James Kinter & Miquel-Àngel Rodríguez-Arias & Nils Stenseth & David Alons, 2013. "Climate change and infectious diseases: Can we meet the needs for better prediction?," Climatic Change, Springer, vol. 118(3), pages 625-640, June.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Richard Bluhm & Maxim Pinkovskiy, 2021. "The spread of COVID-19 and the BCG vaccine: A natural experiment in reunified Germany," The Econometrics Journal, Royal Economic Society, vol. 24(3), pages 353-376.
    2. Chen, Ning & Zhu, Xuzhen & Chen, Yanyan, 2019. "Information spreading on complex networks with general group distribution," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 523(C), pages 671-676.
    3. Zou, Yang & Xiong, Zhongyang & Zhang, Pu & Wang, Wei, 2018. "Social contagions on multiplex networks with different reliability," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 506(C), pages 728-735.
    4. Yanxin Wang & Jian Li & Xi Zhao & Gengzhong Feng & Xin (Robert) Luo, 2020. "Using Mobile Phone Data for Emergency Management: a Systematic Literature Review," Information Systems Frontiers, Springer, vol. 22(6), pages 1539-1559, December.
    5. Jun Cai & Bo Xu & Karen Kie Yan Chan & Xueying Zhang & Bing Zhang & Ziyue Chen & Bing Xu, 2019. "Roles of Different Transport Modes in the Spatial Spread of the 2009 Influenza A(H1N1) Pandemic in Mainland China," IJERPH, MDPI, vol. 16(2), pages 1-15, January.
    6. Jessica E. Steele & Carla Pezzulo & Maximilian Albert & Christopher J. Brooks & Elisabeth zu Erbach-Schoenberg & Siobhán B. O’Connor & Pål R. Sundsøy & Kenth Engø-Monsen & Kristine Nilsen & Bonita Gra, 2021. "Mobility and phone call behavior explain patterns in poverty at high-resolution across multiple settings," Palgrave Communications, Palgrave Macmillan, vol. 8(1), pages 1-12, December.
    7. Xueli Wang & Moqin Zhou & Jinzhu Jia & Zhi Geng & Gexin Xiao, 2018. "A Bayesian Approach to Real-Time Monitoring and Forecasting of Chinese Foodborne Diseases," IJERPH, MDPI, vol. 15(8), pages 1-13, August.
    8. Yan Ma & Arvid Bring & Zahra Kalantari & Georgia Destouni, 2019. "Potential for Hydroclimatically Driven Shifts in Infectious Disease Outbreaks: The Case of Tularemia in High-Latitude Regions," IJERPH, MDPI, vol. 16(19), pages 1-11, October.
    9. Long, Linbo & Zhong, Kan & Wang, Wei, 2018. "Malicious viruses spreading on complex networks with heterogeneous recovery rate," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 509(C), pages 746-753.
    10. Zhang, Gui-Qing & Baró, Jordi & Cheng, Fang-Yin & Huang, He & Wang, Lin, 2019. "Avalanche dynamics of a generalized earthquake model," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 525(C), pages 1463-1471.
    11. Nathan H. Schumaker & Sydney M. Watkins, 2021. "Adding Space to Disease Models: A Case Study with COVID-19 in Oregon, USA," Land, MDPI, vol. 10(4), pages 1-13, April.
    12. Zhu, Shu-Shan & Zhu, Xu-Zhen & Wang, Jian-Qun & Zhang, Zeng-Ping & Wang, Wei, 2019. "Social contagions on multiplex networks with heterogeneous population," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 516(C), pages 105-113.
    13. Shu, Panpan & Wang, Wei & Eugene Stanley, H. & Braunstein, Lidia A., 2018. "A general social contagion dynamic in interconnected lattices," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 511(C), pages 272-279.
    14. Shengjie Lai & Elisabeth zu Erbach-Schoenberg & Carla Pezzulo & Nick W. Ruktanonchai & Alessandro Sorichetta & Jessica Steele & Tracey Li & Claire A. Dooley & Andrew J. Tatem, 2019. "Exploring the use of mobile phone data for national migration statistics," Palgrave Communications, Palgrave Macmillan, vol. 5(1), pages 1-10, December.
    15. Omer Ajmal & Shahzad Mumtaz & Humaira Arshad & Abdullah Soomro & Tariq Hussain & Razaz Waheeb Attar & Ahmed Alhomoud, 2024. "Enhanced Parameter Estimation of DENsity CLUstEring (DENCLUE) Using Differential Evolution," Mathematics, MDPI, vol. 12(17), pages 1-46, September.
    16. Zhu, Xuzhen & Liu, Yuxin & Wang, Shengfeng & Wang, Ruijie & Chen, Xiaolong & Wang, Wei, 2021. "Allocating resources for epidemic spreading on metapopulation networks," Applied Mathematics and Computation, Elsevier, vol. 411(C).
    17. Dáithí Stone & Maximilian Auffhammer & Mark Carey & Gerrit Hansen & Christian Huggel & Wolfgang Cramer & David Lobell & Ulf Molau & Andrew Solow & Lourdes Tibig & Gary Yohe, 2013. "The challenge to detect and attribute effects of climate change on human and natural systems," Climatic Change, Springer, vol. 121(2), pages 381-395, November.
    18. Lu, Peng & Nie, Shizhao, 2019. "The strength distribution and combined duration prediction of online collective actions: Big data analysis and BP neural networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 535(C).
    19. Joaquín Pérez-Ortega & Nelva Nely Almanza-Ortega & David Romero, 2018. "Balancing effort and benefit of K-means clustering algorithms in Big Data realms," PLOS ONE, Public Library of Science, vol. 13(9), pages 1-19, September.
    20. Zhang, Shuhua & Zhang, Zhipeng & Wu, Yu’e & Yan, Ming & Xie, Yunya, 2018. "Tolerance-based punishment and cooperation in spatial public goods game," Chaos, Solitons & Fractals, Elsevier, vol. 110(C), pages 267-272.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jijerp:v:17:y:2020:i:13:p:4872-:d:381114. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.