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Robust feature screening for ultra-high dimensional right censored data via distance correlation

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  • Chen, Xiaolin
  • Chen, Xiaojing
  • Wang, Hong

Abstract

Ultra-high dimensional data with right censored survival times are frequently collected in large-scale biomedical studies, for which feature screening has become an indispensable statistical tool. In this paper, we propose two new feature screening procedures based on distance correlation. The first approach performs feature screening through replacing the response and covariate by their cumulative distribution functions’ Kaplan–Meier estimator and empirical distribution function respectively, while the second one modifies the distance correlation via an idea of composite quantile regression. The sure screening properties are established under some rather mild technical assumptions, which allow that the dimensionality increases at an exponential rate of the sample size. The proposed methods have three desirable characteristics. Firstly, they are model-free and thus robust to model misspecification. Secondly, they behave reliably when some features contain outliers or follow heavy-tailed distributions. Thirdly, our procedures have better convergence rate than that of distance correlation screening in Li et al. (2012b). Both simulated and real examples show that the proposed methods perform competitively.

Suggested Citation

  • Chen, Xiaolin & Chen, Xiaojing & Wang, Hong, 2018. "Robust feature screening for ultra-high dimensional right censored data via distance correlation," Computational Statistics & Data Analysis, Elsevier, vol. 119(C), pages 118-138.
  • Handle: RePEc:eee:csdana:v:119:y:2018:i:c:p:118-138
    DOI: 10.1016/j.csda.2017.10.004
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    References listed on IDEAS

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    1. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    2. Jingyuan Liu & Runze Li & Rongling Wu, 2014. "Feature Selection for Varying Coefficient Models With Ultrahigh-Dimensional Covariates," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(505), pages 266-274, March.
    3. Yuanshan Wu & Guosheng Yin, 2015. "Conditional quantile screening in ultrahigh-dimensional heterogeneous data," Biometrika, Biometrika Trust, vol. 102(1), pages 65-76.
    4. Lai, Peng & Liu, Yiming & Liu, Zhi & Wan, Yi, 2017. "Model free feature screening for ultrahigh dimensional data with responses missing at random," Computational Statistics & Data Analysis, Elsevier, vol. 105(C), pages 201-216.
    5. Zhao, Sihai Dave & Li, Yi, 2012. "Principled sure independence screening for Cox models with ultra-high-dimensional covariates," Journal of Multivariate Analysis, Elsevier, vol. 105(1), pages 397-411.
    6. Xiaofeng Shao & Jingsi Zhang, 2014. "Martingale Difference Correlation and Its Use in High-Dimensional Variable Screening," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(507), pages 1302-1318, September.
    7. Rui Song & Wenbin Lu & Shuangge Ma & X. Jessie Jeng, 2014. "Censored rank independence screening for high-dimensional survival data," Biometrika, Biometrika Trust, vol. 101(4), pages 799-814.
    8. Jianqing Fan & Jinchi Lv, 2008. "Sure independence screening for ultrahigh dimensional feature space," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(5), pages 849-911, November.
    9. Runze Li & Wei Zhong & Liping Zhu, 2012. "Feature Screening via Distance Correlation Learning," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(499), pages 1129-1139, September.
    10. Zhang, Jing & Liu, Yanyan & Wu, Yuanshan, 2017. "Correlation rank screening for ultrahigh-dimensional survival data," Computational Statistics & Data Analysis, Elsevier, vol. 108(C), pages 121-132.
    11. Anders Gorst-Rasmussen & Thomas Scheike, 2013. "Independent screening for single-index hazard rate models with ultrahigh dimensional features," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 75(2), pages 217-246, March.
    12. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
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    Cited by:

    1. Lu, Shuiyun & Chen, Xiaolin & Xu, Sheng & Liu, Chunling, 2020. "Joint model-free feature screening for ultra-high dimensional semi-competing risks data," Computational Statistics & Data Analysis, Elsevier, vol. 147(C).
    2. Li-Pang Chen, 2021. "Feature screening based on distance correlation for ultrahigh-dimensional censored data with covariate measurement error," Computational Statistics, Springer, vol. 36(2), pages 857-884, June.
    3. Chen, Xiaolin & Zhang, Yahui & Liu, Yi & Chen, Xiaojing, 2020. "Model-free feature screening for ultra-high dimensional competing risks data," Statistics & Probability Letters, Elsevier, vol. 164(C).
    4. Xiaolin Chen & Catherine Chunling Liu & Sheng Xu, 2021. "An efficient algorithm for joint feature screening in ultrahigh-dimensional Cox’s model," Computational Statistics, Springer, vol. 36(2), pages 885-910, June.
    5. Dominic Edelmann & Thomas Welchowski & Axel Benner, 2022. "A consistent version of distance covariance for right‐censored survival data and its application in hypothesis testing," Biometrics, The International Biometric Society, vol. 78(3), pages 867-879, September.
    6. Chen, Xiaolin & Zhang, Yahui & Chen, Xiaojing & Liu, Yi, 2019. "A simple model-free survival conditional feature screening," Statistics & Probability Letters, Elsevier, vol. 146(C), pages 156-160.
    7. Jing Zhang & Qihua Wang & Xuan Wang, 2022. "Surrogate-variable-based model-free feature screening for survival data under the general censoring mechanism," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 74(2), pages 379-397, April.
    8. Xiaolin Chen & Yi Liu & Qihua Wang, 2019. "Joint feature screening for ultra-high-dimensional sparse additive hazards model by the sparsity-restricted pseudo-score estimator," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 71(5), pages 1007-1031, October.
    9. Zhong, Wei & Wang, Jiping & Chen, Xiaolin, 2021. "Censored mean variance sure independence screening for ultrahigh dimensional survival data," Computational Statistics & Data Analysis, Elsevier, vol. 159(C).

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