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Multimodal neuroimaging data integration and pathway analysis

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  • Yi Zhao
  • Lexin Li
  • Brian S. Caffo

Abstract

With advancements in technology, the collection of multiple types of measurements on a common set of subjects is becoming routine in science. Some notable examples include multimodal neuroimaging studies for the simultaneous investigation of brain structure and function and multi‐omics studies for combining genetic and genomic information. Integrative analysis of multimodal data allows scientists to interrogate new mechanistic questions. However, the data collection and generation of integrative hypotheses is outpacing available methodology for joint analysis of multimodal measurements. In this article, we study high‐dimensional multimodal data integration in the context of mediation analysis. We aim to understand the roles that different data modalities play as possible mediators in the pathway between an exposure variable and an outcome. We propose a mediation model framework with two data types serving as separate sets of mediators and develop a penalized optimization approach for parameter estimation. We study both the theoretical properties of the estimator through an asymptotic analysis and its finite‐sample performance through simulations. We illustrate our method with a multimodal brain pathway analysis having both structural and functional connectivity as mediators in the association between sex and language processing.

Suggested Citation

  • Yi Zhao & Lexin Li & Brian S. Caffo, 2021. "Multimodal neuroimaging data integration and pathway analysis," Biometrics, The International Biometric Society, vol. 77(3), pages 879-889, September.
  • Handle: RePEc:bla:biomet:v:77:y:2021:i:3:p:879-889
    DOI: 10.1111/biom.13351
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    References listed on IDEAS

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    1. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    2. Hui Zou & Trevor Hastie, 2005. "Addendum: Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(5), pages 768-768, November.
    3. Zhao, Yi & Lindquist, Martin A. & Caffo, Brian S., 2020. "Sparse principal component based high-dimensional mediation analysis," Computational Statistics & Data Analysis, Elsevier, vol. 142(C).
    4. White, Halbert, 1980. "A Heteroskedasticity-Consistent Covariance Matrix Estimator and a Direct Test for Heteroskedasticity," Econometrica, Econometric Society, vol. 48(4), pages 817-838, May.
    5. Martin A. Lindquist, 2012. "Functional Causal Mediation Analysis With an Application to Brain Connectivity," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(500), pages 1297-1309, December.
    6. Hui Zou & Trevor Hastie, 2005. "Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(2), pages 301-320, April.
    7. Yen-Tsung Huang & Wen-Chi Pan, 2016. "Hypothesis test of mediation effect in causal mediation model with high-dimensional continuous mediators," Biometrics, The International Biometric Society, vol. 72(2), pages 402-413, June.
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    Cited by:

    1. Shao, Lihui & Wu, Jiaqi & Zhang, Weiping & Chen, Yu, 2024. "Integrated subgroup identification from multi-source data," Computational Statistics & Data Analysis, Elsevier, vol. 193(C).

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