IDEAS home Printed from https://ideas.repec.org/a/eee/csdana/v57y2013i1p631-644.html
   My bibliography  Save this article

An extended variable inclusion and shrinkage algorithm for correlated variables

Author

Listed:
  • Mkhadri, Abdallah
  • Ouhourane, Mohamed

Abstract

The problem of variable selection for linear regression in a high dimension model is considered. A new method, called Extended-VISA (Ext-VISA), is proposed to simultaneously select variables and encourage a grouping effect where strongly correlated predictors tend to be in or out of the model together. Moreover, Ext-VISA is capable of selecting a sparse model while avoiding the overshrinkage of a Lasso-type estimator. It combines the idea of the VISA algorithm which avoids the overshrinkage problem of regression coefficients and those of the Lasso-type estimators, based on ℓ1+ℓ2 penalty, that overcome the limitation of the grouping effect of Lasso in high dimension. It is based on a modified VISA algorithm, so it is also computationally efficient. Three interesting cases of Ext-VISA are examined. The first case is Smooth-VISA (SVISA), where the variations among successive regression coefficients are low. The second case is VISA-Net (VNET), where the correlations between predictors are taken into account. The third case is Laplacian-VISA (LVISA), where the predictors are measured on an undirected graph. A theoretical property on sparsity inequality of Ext-VISA is established. A detailed simulation study in small and high dimensional settings is performed, which illustrates the advantages of the new approach in relation to several other possible methods. Finally, we apply VNET, SVISA and LVISA to a GC-retention data set.

Suggested Citation

  • Mkhadri, Abdallah & Ouhourane, Mohamed, 2013. "An extended variable inclusion and shrinkage algorithm for correlated variables," Computational Statistics & Data Analysis, Elsevier, vol. 57(1), pages 631-644.
  • Handle: RePEc:eee:csdana:v:57:y:2013:i:1:p:631-644
    DOI: 10.1016/j.csda.2012.07.023
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0167947312002976
    Download Restriction: Full text for ScienceDirect subscribers only.

    File URL: https://libkey.io/10.1016/j.csda.2012.07.023?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Robert Tibshirani & Michael Saunders & Saharon Rosset & Ji Zhu & Keith Knight, 2005. "Sparsity and smoothness via the fused lasso," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(1), pages 91-108, February.
    2. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    3. Meinshausen, Nicolai, 2007. "Relaxed Lasso," Computational Statistics & Data Analysis, Elsevier, vol. 52(1), pages 374-393, September.
    4. Friedman, Jerome H. & Hastie, Trevor & Tibshirani, Rob, 2010. "Regularization Paths for Generalized Linear Models via Coordinate Descent," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 33(i01).
    5. Gareth M. James & Peter Radchenko & Jinchi Lv, 2009. "DASSO: connections between the Dantzig selector and lasso," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 71(1), pages 127-142, January.
    6. Hui Zou & Trevor Hastie, 2005. "Addendum: Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(5), pages 768-768, November.
    7. Hui Zou & Trevor Hastie, 2005. "Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(2), pages 301-320, April.
    8. Daye, Z. John & Jeng, X. Jessie, 2009. "Shrinkage and model selection with correlated variables via weighted fusion," Computational Statistics & Data Analysis, Elsevier, vol. 53(4), pages 1284-1298, February.
    9. Gareth M. James & Peter Radchenko, 2009. "A generalized Dantzig selector with shrinkage tuning," Biometrika, Biometrika Trust, vol. 96(2), pages 323-337.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. JinXing Che & YouLong Yang, 2017. "Stochastic correlation coefficient ensembles for variable selection," Journal of Applied Statistics, Taylor & Francis Journals, vol. 44(10), pages 1721-1742, July.
    2. Korzeń, M. & Jaroszewicz, S. & Klęsk, P., 2013. "Logistic regression with weight grouping priors," Computational Statistics & Data Analysis, Elsevier, vol. 64(C), pages 281-298.
    3. Abdallah Mkhadri & Mohamed Ouhourane, 2015. "A group VISA algorithm for variable selection," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 24(1), pages 41-60, March.
    4. Mohamed Ouhourane & Yi Yang & Andréa L. Benedet & Karim Oualkacha, 2022. "Group penalized quantile regression," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 31(3), pages 495-529, September.
    5. Chun-Xia Zhang & Guan-Wei Wang & Jun-Min Liu, 2015. "RandGA: injecting randomness into parallel genetic algorithm for variable selection," Journal of Applied Statistics, Taylor & Francis Journals, vol. 42(3), pages 630-647, March.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Tutz, Gerhard & Pößnecker, Wolfgang & Uhlmann, Lorenz, 2015. "Variable selection in general multinomial logit models," Computational Statistics & Data Analysis, Elsevier, vol. 82(C), pages 207-222.
    2. Tomáš Plíhal, 2021. "Scheduled macroeconomic news announcements and Forex volatility forecasting," Journal of Forecasting, John Wiley & Sons, Ltd., vol. 40(8), pages 1379-1397, December.
    3. Loann David Denis Desboulets, 2018. "A Review on Variable Selection in Regression Analysis," Econometrics, MDPI, vol. 6(4), pages 1-27, November.
    4. Jingxuan Luo & Lili Yue & Gaorong Li, 2023. "Overview of High-Dimensional Measurement Error Regression Models," Mathematics, MDPI, vol. 11(14), pages 1-22, July.
    5. Pei Wang & Shunjie Chen & Sijia Yang, 2022. "Recent Advances on Penalized Regression Models for Biological Data," Mathematics, MDPI, vol. 10(19), pages 1-24, October.
    6. Jiang, Liewen & Bondell, Howard D. & Wang, Huixia Judy, 2014. "Interquantile shrinkage and variable selection in quantile regression," Computational Statistics & Data Analysis, Elsevier, vol. 69(C), pages 208-219.
    7. Armin Rauschenberger & Iuliana Ciocănea-Teodorescu & Marianne A. Jonker & Renée X. Menezes & Mark A. Wiel, 2020. "Sparse classification with paired covariates," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 14(3), pages 571-588, September.
    8. Siwei Xia & Yuehan Yang & Hu Yang, 2022. "Sparse Laplacian Shrinkage with the Graphical Lasso Estimator for Regression Problems," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 31(1), pages 255-277, March.
    9. Bergersen Linn Cecilie & Glad Ingrid K. & Lyng Heidi, 2011. "Weighted Lasso with Data Integration," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 10(1), pages 1-29, August.
    10. Diego Vidaurre & Concha Bielza & Pedro Larrañaga, 2013. "A Survey of L1 Regression," International Statistical Review, International Statistical Institute, vol. 81(3), pages 361-387, December.
    11. Roberts, S. & Nowak, G., 2014. "Stabilizing the lasso against cross-validation variability," Computational Statistics & Data Analysis, Elsevier, vol. 70(C), pages 198-211.
    12. Howard D. Bondell & Brian J. Reich, 2012. "Consistent High-Dimensional Bayesian Variable Selection via Penalized Credible Regions," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(500), pages 1610-1624, December.
    13. Laura Freijeiro‐González & Manuel Febrero‐Bande & Wenceslao González‐Manteiga, 2022. "A Critical Review of LASSO and Its Derivatives for Variable Selection Under Dependence Among Covariates," International Statistical Review, International Statistical Institute, vol. 90(1), pages 118-145, April.
    14. Md Showaib Rahman Sarker & Michael Pokojovy & Sangjin Kim, 2019. "On the Performance of Variable Selection and Classification via Rank-Based Classifier," Mathematics, MDPI, vol. 7(5), pages 1-16, May.
    15. Yize Zhao & Matthias Chung & Brent A. Johnson & Carlos S. Moreno & Qi Long, 2016. "Hierarchical Feature Selection Incorporating Known and Novel Biological Information: Identifying Genomic Features Related to Prostate Cancer Recurrence," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(516), pages 1427-1439, October.
    16. Chuliá, Helena & Garrón, Ignacio & Uribe, Jorge M., 2024. "Daily growth at risk: Financial or real drivers? The answer is not always the same," International Journal of Forecasting, Elsevier, vol. 40(2), pages 762-776.
    17. Christopher J Greenwood & George J Youssef & Primrose Letcher & Jacqui A Macdonald & Lauryn J Hagg & Ann Sanson & Jenn Mcintosh & Delyse M Hutchinson & John W Toumbourou & Matthew Fuller-Tyszkiewicz &, 2020. "A comparison of penalised regression methods for informing the selection of predictive markers," PLOS ONE, Public Library of Science, vol. 15(11), pages 1-14, November.
    18. Mostafa Rezaei & Ivor Cribben & Michele Samorani, 2021. "A clustering-based feature selection method for automatically generated relational attributes," Annals of Operations Research, Springer, vol. 303(1), pages 233-263, August.
    19. Camila Epprecht & Dominique Guegan & Álvaro Veiga & Joel Correa da Rosa, 2017. "Variable selection and forecasting via automated methods for linear models: LASSO/adaLASSO and Autometrics," Post-Print halshs-00917797, HAL.
    20. Peter Bühlmann & Jacopo Mandozzi, 2014. "High-dimensional variable screening and bias in subsequent inference, with an empirical comparison," Computational Statistics, Springer, vol. 29(3), pages 407-430, June.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:57:y:2013:i:1:p:631-644. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.