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Inverse Modelling, Sensitivity and Monte Carlo Analysis in R Using Package FME

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Cited by:

  1. Krishna, Shubham & Ulloa, Hugo N. & Kerimoglu, Onur & Minaudo, Camille & Anneville, Orlane & Wüest, Alfred, 2021. "Model-based data analysis of the effect of winter mixing on primary production in a lake under reoligotrophication," Ecological Modelling, Elsevier, vol. 440(C).
  2. Zhou, W. & O’Neill, E. & Moncaster, A. & Reiner, D. & Guthrie, P., 2019. "Applying Bayesian Model Averaging to Characterise Urban Residential Stock Turnover Dynamics," Cambridge Working Papers in Economics 1986, Faculty of Economics, University of Cambridge.
  3. Kankoé Sallah & Roch Giorgi & El-Hadj Ba & Martine Piarroux & Renaud Piarroux & Badara Cisse & Jean Gaudart, 2020. "Targeting Malaria Hotspots to Reduce Transmission Incidence in Senegal," IJERPH, MDPI, vol. 18(1), pages 1-17, December.
  4. Haas, Marcelo B. & Guse, Björn & Pfannerstill, Matthias & Fohrer, Nicola, 2015. "Detection of dominant nitrate processes in ecohydrological modeling with temporal parameter sensitivity analysis," Ecological Modelling, Elsevier, vol. 314(C), pages 62-72.
  5. Soetaert, Karline & Petzoldt, Thomas & Setzer, R. Woodrow, 2010. "Solving Differential Equations in R: Package deSolve," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 33(i09).
  6. Hanson, Paul C. & Stillman, Aviah B. & Jia, Xiaowei & Karpatne, Anuj & Dugan, Hilary A. & Carey, Cayelan C. & Stachelek, Joseph & Ward, Nicole K. & Zhang, Yu & Read, Jordan S. & Kumar, Vipin, 2020. "Predicting lake surface water phosphorus dynamics using process-guided machine learning," Ecological Modelling, Elsevier, vol. 430(C).
  7. Tom Shatwell & Jan Köhler & Andreas Nicklisch, 2014. "Temperature and Photoperiod Interactions with Phosphorus-Limited Growth and Competition of Two Diatoms," PLOS ONE, Public Library of Science, vol. 9(7), pages 1-15, July.
  8. Van Frausum, Johan & Middelburg, Jack J. & Soetaert, Karline & Meysman, Filip J.R., 2010. "Different proxies for the reactivity of aquatic sediments towards oxygen: A model assessment," Ecological Modelling, Elsevier, vol. 221(17), pages 2054-2067.
  9. Lucash, Melissa S. & Marshall, Adrienne M. & Weiss, Shelby A. & McNabb, John W. & Nicolsky, Dmitry J. & Flerchinger, Gerald N. & Link, Timothy E. & Vogel, Jason G. & Scheller, Robert M. & Abramoff, Ro, 2023. "Burning trees in frozen soil: Simulating fire, vegetation, soil, and hydrology in the boreal forests of Alaska," Ecological Modelling, Elsevier, vol. 481(C).
  10. Zhou, Wei & O'Neill, Eoghan & Moncaster, Alice & Reiner, David M. & Guthrie, Peter, 2020. "Forecasting urban residential stock turnover dynamics using system dynamics and Bayesian model averaging," Applied Energy, Elsevier, vol. 275(C).
  11. Elisa Fesce & Claudia Romeo & Eleonora Chinchio & Nicola Ferrari, 2020. "How to choose the best control strategy? Mathematical models as a tool for pre-intervention evaluation on a macroparasitic disease," PLOS Neglected Tropical Diseases, Public Library of Science, vol. 14(10), pages 1-17, October.
  12. Lee, Kyoungjae & Lee, Jaeyong & Dass, Sarat C., 2018. "Inference for differential equation models using relaxation via dynamical systems," Computational Statistics & Data Analysis, Elsevier, vol. 127(C), pages 116-134.
  13. Husson, Bérengère & Sarrazin, Jozée & van Oevelen, Dick & Sarradin, Pierre-Marie & Soetaert, Karline & Menesguen, Alain, 2018. "Modelling the interactions of the hydrothermal mussel Bathymodiolus azoricus with vent fluid," Ecological Modelling, Elsevier, vol. 377(C), pages 35-50.
  14. Keane, Robert E. & McKenzie, Donald & Falk, Donald A. & Smithwick, Erica A.H. & Miller, Carol & Kellogg, Lara-Karena B., 2015. "Representing climate, disturbance, and vegetation interactions in landscape models," Ecological Modelling, Elsevier, vol. 309, pages 33-47.
  15. Meier, Laura & Brauns, Mario & Grimm, Volker & Weitere, Markus & Frank, Karin, 2022. "MASTIFF: A mechanistic model for cross-scale analyses of the functioning of multiple stressed riverine ecosystems," Ecological Modelling, Elsevier, vol. 470(C).
  16. Beck, Marcus W. & Lehrter, John C. & Lowe, Lisa L. & Jarvis, Brandon M., 2017. "Parameter sensitivity and identifiability for a biogeochemical model of hypoxia in the northern Gulf of Mexico," Ecological Modelling, Elsevier, vol. 363(C), pages 17-30.
  17. McCullough, Ian M. & Dugan, Hilary A. & Farrell, Kaitlin J. & Morales-Williams, Ana M. & Ouyang, Zutao & Roberts, Derek & Scordo, Facundo & Bartlett, Sarah L. & Burke, Samantha M. & Doubek, Jonathan P, 2018. "Dynamic modeling of organic carbon fates in lake ecosystems," Ecological Modelling, Elsevier, vol. 386(C), pages 71-82.
  18. Hussnain Mukhtar & Yu-Pin Lin & Oleg V. Shipin & Joy R. Petway, 2017. "Modeling Nitrogen Dynamics in a Waste Stabilization Pond System Using Flexible Modeling Environment with MCMC," IJERPH, MDPI, vol. 14(7), pages 1-15, July.
  19. Jinyoung Yang & Jeffrey S. Rosenthal, 2017. "Automatically tuned general-purpose MCMC via new adaptive diagnostics," Computational Statistics, Springer, vol. 32(1), pages 315-348, March.
  20. Shoya Iwanami & Kosaku Kitagawa & Hirofumi Ohashi & Yusuke Asai & Kaho Shionoya & Wakana Saso & Kazane Nishioka & Hisashi Inaba & Shinji Nakaoka & Takaji Wakita & Odo Diekmann & Shingo Iwami & Koichi , 2020. "Should a viral genome stay in the host cell or leave? A quantitative dynamics study of how hepatitis C virus deals with this dilemma," PLOS Biology, Public Library of Science, vol. 18(7), pages 1-17, July.
  21. Hannah Al Ali & Alireza Daneshkhah & Abdesslam Boutayeb & Zindoga Mukandavire, 2022. "Examining Type 1 Diabetes Mathematical Models Using Experimental Data," IJERPH, MDPI, vol. 19(2), pages 1-20, January.
  22. G. Máthé-Gáspár & N. Fodor, 2012. "Modeling the phosphorus balance of different soilsusing the 4M crop model," Plant, Soil and Environment, Czech Academy of Agricultural Sciences, vol. 58(9), pages 391-398.
  23. Taffi, Marianna & Paoletti, Nicola & Liò, Pietro & Pucciarelli, Sandra & Marini, Mauro, 2015. "Bioaccumulation modelling and sensitivity analysis for discovering key players in contaminated food webs: The case study of PCBs in the Adriatic Sea," Ecological Modelling, Elsevier, vol. 306(C), pages 205-215.
  24. Sehjeong Kim & Abdessamad Tridane, 2017. "Thalassemia in the United Arab Emirates: Why it can be prevented but not eradicated," PLOS ONE, Public Library of Science, vol. 12(1), pages 1-13, January.
  25. repec:jss:jstsof:33:i09 is not listed on IDEAS
  26. Krishna, Shubham & Pahlow, Markus & Schartau, Markus, 2019. "Comparison of two carbon-nitrogen regulatory models calibrated with mesocosm data," Ecological Modelling, Elsevier, vol. 411(C).
  27. Raquel Martins Lana & Maíra Moreira Morais & Tiago França Melo de Lima & Tiago Garcia de Senna Carneiro & Lucas Martins Stolerman & Jefferson Pereira Caldas dos Santos & José Joaquín Carvajal Cortés &, 2018. "Assessment of a trap based Aedes aegypti surveillance program using mathematical modeling," PLOS ONE, Public Library of Science, vol. 13(1), pages 1-16, January.
  28. Littfinski, Tobias & Stricker, Max & Nettmann, Edith & Gehring, Tito & Hiegemann, Heinz & Krimmler, Stefan & Lübken, Manfred & Pant, Deepak & Wichern, Marc, 2022. "A generalized whole-cell model for wastewater-fed microbial fuel cells," Applied Energy, Elsevier, vol. 321(C).
  29. Chengyao Jiang & Ke Xu & Jiahui Rao & Jiaming Liu & Yushan Li & Yu Song & Mengyao Li & Yangxia Zheng & Wei Lu, 2024. "Establishment and Solution of a Finite Element Gas Exchange Model in Greenhouse-Grown Tomatoes for Two-Dimensional Porous Media with Light Quantity and Light Direction," Agriculture, MDPI, vol. 14(8), pages 1-19, July.
  30. Venolia, Celeste T. & Lavaud, Romain & Green-Gavrielidis, Lindsay A. & Thornber, Carol & Humphries, Austin T., 2020. "Modeling the Growth of Sugar Kelp (Saccharina latissima) in Aquaculture Systems using Dynamic Energy Budget Theory," Ecological Modelling, Elsevier, vol. 430(C).
  31. Zindoga Mukandavire & Farai Nyabadza & Noble J Malunguza & Diego F Cuadros & Tinevimbo Shiri & Godfrey Musuka, 2020. "Quantifying early COVID-19 outbreak transmission in South Africa and exploring vaccine efficacy scenarios," PLOS ONE, Public Library of Science, vol. 15(7), pages 1-11, July.
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