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Facilitating Parameter Estimation and Sensitivity Analysis of Agent-Based Models: A Cookbook Using NetLogo and 'R'

Citations

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Cited by:

  1. Halsey, Samniqueka J. & Miller, James R., 2018. "A spatial agent-based model of the disease vector Ixodes scapularis to explore host-tick associations," Ecological Modelling, Elsevier, vol. 387(C), pages 96-106.
  2. Lamperti, Francesco & Roventini, Andrea & Sani, Amir, 2018. "Agent-based model calibration using machine learning surrogates," Journal of Economic Dynamics and Control, Elsevier, vol. 90(C), pages 366-389.
  3. Emanuele Borgonovo & Marco Pangallo & Jan Rivkin & Leonardo Rizzo & Nicolaj Siggelkow, 2022. "Sensitivity analysis of agent-based models: a new protocol," Computational and Mathematical Organization Theory, Springer, vol. 28(1), pages 52-94, March.
  4. Priscilla Avegliano & Jaime Simão Sichman, 2023. "Equation-Based Versus Agent-Based Models: Why Not Embrace Both for an Efficient Parameter Calibration?," Journal of Artificial Societies and Social Simulation, Journal of Artificial Societies and Social Simulation, vol. 26(4), pages 1-3.
  5. Grant, Tyler J. & Parry, Hazel R. & Zalucki, Myron P. & Bradbury, Steven P., 2018. "Predicting monarch butterfly (Danaus plexippus) movement and egg-laying with a spatially-explicit agent-based model: The role of monarch perceptual range and spatial memory," Ecological Modelling, Elsevier, vol. 374(C), pages 37-50.
  6. Ștefan Ionescu & Ionuț Nica & Nora Chiriță, 2021. "Cybernetics Approach Using Agent-Based Modeling in the Process of Evacuating Educational Institutions in Case of Disasters," Sustainability, MDPI, vol. 13(18), pages 1-29, September.
  7. John J. Nay & Yevgeniy Vorobeychik, 2016. "Predicting Human Cooperation," Papers 1601.07792, arXiv.org, revised Apr 2016.
  8. Gawith, David & Hodge, Ian & Morgan, Fraser & Daigneault, Adam, 2020. "Climate change costs more than we think because people adapt less than we assume," Ecological Economics, Elsevier, vol. 173(C).
  9. Christopher J Lynch & Saikou Y Diallo & Hamdi Kavak & Jose J Padilla, 2020. "A content analysis-based approach to explore simulation verification and identify its current challenges," PLOS ONE, Public Library of Science, vol. 15(5), pages 1-33, May.
  10. Dominik Husarek & Vjekoslav Salapic & Simon Paulus & Michael Metzger & Stefan Niessen, 2021. "Modeling the Impact of Electric Vehicle Charging Infrastructure on Regional Energy Systems: Fields of Action for an Improved e-Mobility Integration," Energies, MDPI, vol. 14(23), pages 1-27, November.
  11. Dick, D.D.C. & Ayllón, D., 2017. "FloMan-MF: Floodplain Management for the Moor Frog − a simulation model for amphibian conservation in dynamic wetlands," Ecological Modelling, Elsevier, vol. 348(C), pages 110-124.
  12. Ayllón, Daniel & Railsback, Steven F. & Vincenzi, Simone & Groeneveld, Jürgen & Almodóvar, Ana & Grimm, Volker, 2016. "InSTREAM-Gen: Modelling eco-evolutionary dynamics of trout populations under anthropogenic environmental change," Ecological Modelling, Elsevier, vol. 326(C), pages 36-53.
  13. Lapp, Maya & Long, Colby, 2022. "A new approach to agent-based models of Community Resource Management based on the analysis of cheating, monitoring, and sanctioning," Ecological Modelling, Elsevier, vol. 468(C).
  14. Lorscheid, Iris & Meyer, Matthias, 2016. "Divide and conquer: Configuring submodels for valid and efficient analyses of complex simulation models," Ecological Modelling, Elsevier, vol. 326(C), pages 152-161.
  15. Onggo, Bhakti Stephan & Karatas, Mumtaz, 2016. "Test-driven simulation modelling: A case study using agent-based maritime search-operation simulation," European Journal of Operational Research, Elsevier, vol. 254(2), pages 517-531.
  16. Grimm, Volker & Berger, Uta, 2016. "Robustness analysis: Deconstructing computational models for ecological theory and applications," Ecological Modelling, Elsevier, vol. 326(C), pages 162-167.
  17. Robert Huber & Hang Xiong & Kevin Keller & Robert Finger, 2022. "Bridging behavioural factors and standard bio‐economic modelling in an agent‐based modelling framework," Journal of Agricultural Economics, Wiley Blackwell, vol. 73(1), pages 35-63, February.
  18. Chakaphon Singto & Martijn Vries & Gert Jan Hofstede & Luuk Fleskens, 2021. "Ex Ante Impact Assessment of Reservoir Construction Projects for Different Stakeholders Using Agent-Based Modeling," Water Resources Management: An International Journal, Published for the European Water Resources Association (EWRA), Springer;European Water Resources Association (EWRA), vol. 35(3), pages 1047-1064, February.
  19. Fust, Pascal & Schlecht, Eva, 2018. "Integrating spatio-temporal variation in resource availability and herbivore movements into rangeland management: RaMDry—An agent-based model on livestock feeding ecology in a dynamic, heterogeneous, ," Ecological Modelling, Elsevier, vol. 369(C), pages 13-41.
  20. van der Vaart, Elske & Beaumont, Mark A. & Johnston, Alice S.A. & Sibly, Richard M., 2015. "Calibration and evaluation of individual-based models using Approximate Bayesian Computation," Ecological Modelling, Elsevier, vol. 312(C), pages 182-190.
  21. Alexandra I. Klimenko & Diana A. Vorobeva & Sergey A. Lashin, 2023. "A New Visualization and Analysis Method for a Convolved Representation of Mass Computational Experiments with Biological Models," Mathematics, MDPI, vol. 11(12), pages 1-19, June.
  22. André Grow & Jan Van Bavel, 2015. "Assortative Mating and the Reversal of Gender Inequality in Education in Europe: An Agent-Based Model," PLOS ONE, Public Library of Science, vol. 10(6), pages 1-24, June.
  23. Giorgio Fagiolo & Mattia Guerini & Francesco Lamperti & Alessio Moneta & Andrea Roventini, 2017. "Validation of Agent-Based Models in Economics and Finance," LEM Papers Series 2017/23, Laboratory of Economics and Management (LEM), Sant'Anna School of Advanced Studies, Pisa, Italy.
  24. Fouladvand, Javanshir & Aranguren Rojas, Maria & Hoppe, Thomas & Ghorbani, Amineh, 2022. "Simulating thermal energy community formation: Institutional enablers outplaying technological choice," Applied Energy, Elsevier, vol. 306(PA).
  25. Boeing, Geoff, 2018. "The Effects of Inequality, Density, and Heterogeneous Residential Preferences on Urban Displacement and Metropolitan Structure: An Agent-Based Model," SocArXiv mkq7d, Center for Open Science.
  26. Huber, Robert & Kreft, Cordelia & Späti, Karin & Finger, Robert, 2024. "Quantifying the importance of farmers' behavioral factors in ex-ante assessments of policies supporting sustainable farming practices," Ecological Economics, Elsevier, vol. 224(C).
  27. Troost, Christian & Huber, Robert & Bell, Andrew R. & van Delden, Hedwig & Filatova, Tatiana & Le, Quang Bao & Lippe, Melvin & Niamir, Leila & Polhill, J. Gareth & Sun, Zhanli & Berger, Thomas, 2023. "How to keep it adequate: A protocol for ensuring validity in agent-based simulation," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 159, pages 1-21.
  28. Stenglein, Jennifer L. & Gilbert, Jonathan H. & Wydeven, Adrian P. & Van Deelen, Timothy R., 2015. "An individual-based model for southern Lake Superior wolves: A tool to explore the effect of human-caused mortality on a landscape of risk," Ecological Modelling, Elsevier, vol. 302(C), pages 13-24.
  29. Wozniak, Marcin, 2016. "Job placement agencies in an agent-based model of the local labor market with the long-term unemployed and on-the-job flows," Economics Discussion Papers 2016-24, Kiel Institute for the World Economy (IfW Kiel).
  30. Drechsler, Martin & Wätzold, Frank & Grimm, Volker, 2022. "The hitchhiker's guide to generic ecological-economic modelling of land-use-based biodiversity conservation policies," Ecological Modelling, Elsevier, vol. 465(C).
  31. Yi Tang & Mingyu Liu & Zhanli Sun, 2020. "Indirect Effects of Grazing on Wind-Dispersed Elm Seeds in Sparse Woodlands of Northern China," Land, MDPI, vol. 9(12), pages 1-11, December.
  32. Marius Kaffai & Raphael H Heiberger, 2021. "Modeling non-pharmaceutical interventions in the COVID-19 pandemic with survey-based simulations," PLOS ONE, Public Library of Science, vol. 16(10), pages 1-19, October.
  33. Yoak, Andrew J. & Reece, John F. & Gehrt, Stanley D. & Hamilton, Ian M., 2016. "Optimizing free-roaming dog control programs using agent-based models," Ecological Modelling, Elsevier, vol. 341(C), pages 53-61.
  34. Lamperti, Francesco & Roventini, Andrea & Sani, Amir, 2018. "Agent-based model calibration using machine learning surrogates," Journal of Economic Dynamics and Control, Elsevier, vol. 90(C), pages 366-389.
  35. Wozniak, Marcin, 2016. "Job placement agencies in an artificial labor market," Economics - The Open-Access, Open-Assessment E-Journal (2007-2020), Kiel Institute for the World Economy (IfW Kiel), vol. 10, pages 1-54.
  36. repec:hal:spmain:info:hdl:2441/13thfd12aa8rmplfudlgvgahff is not listed on IDEAS
  37. Planque, Benjamin & Aarflot, Johanna M. & Buttay, Lucie & Carroll, JoLynn & Fransner, Filippa & Hansen, Cecilie & Husson, Bérengère & Langangen, Øystein & Lindstrøm, Ulf & Pedersen, Torstein & Primice, 2022. "A standard protocol for describing the evaluation of ecological models," Ecological Modelling, Elsevier, vol. 471(C).
  38. John J Nay & Yevgeniy Vorobeychik, 2016. "Predicting Human Cooperation," PLOS ONE, Public Library of Science, vol. 11(5), pages 1-19, May.
  39. Medeiros-Sousa, Antônio Ralph & Laporta, Gabriel Zorello & Mucci, Luis Filipe & Marrelli, Mauro Toledo, 2022. "Epizootic dynamics of yellow fever in forest fragments: An agent-based model to explore the influence of vector and host parameters," Ecological Modelling, Elsevier, vol. 466(C).
  40. Thomas, Spencer A. & Lloyd, David J.B. & Skeldon, Anne C., 2016. "Equation-free analysis of agent-based models and systematic parameter determination," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 464(C), pages 27-53.
  41. Grimm, Volker & Berger, Uta, 2016. "Structural realism, emergence, and predictions in next-generation ecological modelling: Synthesis from a special issue," Ecological Modelling, Elsevier, vol. 326(C), pages 177-187.
  42. repec:hal:spmain:info:hdl:2441/20hflp7eqn97boh50no50tv67n is not listed on IDEAS
  43. Lisa Huber & Nico Bahro & Georg Leitinger & Ulrike Tappeiner & Ulrich Strasser, 2019. "Agent-Based Modelling of a Coupled Water Demand and Supply System at the Catchment Scale," Sustainability, MDPI, vol. 11(21), pages 1-15, November.
  44. Chudzińska, Magda & Ayllón, Daniel & Madsen, Jesper & Nabe-Nielsen, Jacob, 2016. "Discriminating between possible foraging decisions using pattern-oriented modelling: The case of pink-footed geese in Mid-Norway during their spring migration," Ecological Modelling, Elsevier, vol. 320(C), pages 299-315.
  45. Chudzinska, Magda & Dupont, Yoko L. & Nabe-Nielsen, Jacob & Maia, Kate P. & Henriksen, Marie V. & Rasmussen, Claus & Kissling, W. Daniel & Hagen, Melanie & Trøjelsgaard, Kristian, 2020. "Combining the strengths of agent-based modelling and network statistics to understand animal movement and interactions with resources: example from within-patch foraging decisions of bumblebees," Ecological Modelling, Elsevier, vol. 430(C).
  46. Brinkmann, Katja & Kübler, Daniel & Liehr, Stefan & Buerkert, Andreas, 2021. "Agent-based modelling of the social-ecological nature of poverty traps in southwestern Madagascar," Agricultural Systems, Elsevier, vol. 190(C).
  47. Tardy, Olivia & Massé, Ariane & Pelletier, Fanie & Fortin, Daniel, 2018. "Interplay between contact risk, conspecific density, and landscape connectivity: An individual-based modeling framework," Ecological Modelling, Elsevier, vol. 373(C), pages 25-38.
  48. Marques, Ana Teresa & Crispim-Mendes, Tiago & Palma, Luís & Pita, Ricardo & Moreira, Francisco & Beja, Pedro, 2024. "Using individual-based demographic modelling to estimate the impacts of anthropogenic mortality on territorial predators," Ecological Modelling, Elsevier, vol. 493(C).
  49. Lee, Ju-Sung & Filatova, Tatiana & Ligmann-Zielinska, Arika & Hassani-Mahmooei, Behrooz & Stonedahl, Forrest & Lorscheid, Iris & Voinov, Alexey & Polhill, J. Gareth & Sun, Zhanli & Parker, Dawn C., 2015. "The complexities of agent-based modeling output analysis," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 18(4).
  50. Schasfoort, Joeri & Stockermans, Christopher, 2017. "Fundamentals unknown: Momentum, mean-reversion and price-to-earnings trading in an artificial stock market," Economics Discussion Papers 2017-63, Kiel Institute for the World Economy (IfW Kiel).
  51. van der Vaart, Elske & Johnston, Alice S.A. & Sibly, Richard M., 2016. "Predicting how many animals will be where: How to build, calibrate and evaluate individual-based models," Ecological Modelling, Elsevier, vol. 326(C), pages 113-123.
  52. Pearce, Phoebe & Slade, Raphael, 2018. "Feed-in tariffs for solar microgeneration: Policy evaluation and capacity projections using a realistic agent-based model," Energy Policy, Elsevier, vol. 116(C), pages 95-111.
  53. Evans, Luke C. & Sibly, Richard M. & Thorbek, Pernille & Sims, Ian & Oliver, Tom H. & Walters, Richard J., 2019. "Quantifying the effectiveness of agri-environment schemes for a grassland butterfly using individual-based models," Ecological Modelling, Elsevier, vol. 411(C).
  54. Neil, Emily & Madsen, Jens Koed & Carrella, Ernesto & Payette, Nicolas & Bailey, Richard, 2020. "Agent-based modelling as a tool for elephant poaching mitigation," Ecological Modelling, Elsevier, vol. 427(C).
  55. Huber, Robert & Späti, Karin & Finger, Robert, 2023. "A behavioural agent-based modelling approach for the ex-ante assessment of policies supporting precision agriculture," Ecological Economics, Elsevier, vol. 212(C).
  56. de Jager, Monique & Hengeveld, Geerten M. & Mooij, Wolf M. & Slooten, Elisabeth, 2019. "Modelling the spatial dynamics of Maui dolphins using individual-based models," Ecological Modelling, Elsevier, vol. 402(C), pages 59-65.
  57. Adrien Querbes, 2018. "Banned from the sharing economy: an agent-based model of a peer-to-peer marketplace for consumer goods and services," Journal of Evolutionary Economics, Springer, vol. 28(3), pages 633-665, August.
  58. Kathrin Eismann, 2021. "Diffusion and persistence of false rumors in social media networks: implications of searchability on rumor self-correction on Twitter," Journal of Business Economics, Springer, vol. 91(9), pages 1299-1329, November.
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