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Identification of Novel Genetic Loci Associated with Thyroid Peroxidase Antibodies and Clinical Thyroid Disease

Author

Listed:
  • Marco Medici
  • Eleonora Porcu
  • Giorgio Pistis
  • Alexander Teumer
  • Suzanne J Brown
  • Richard A Jensen
  • Rajesh Rawal
  • Greet L Roef
  • Theo S Plantinga
  • Sita H Vermeulen
  • Jari Lahti
  • Matthew J Simmonds
  • Lise Lotte N Husemoen
  • Rachel M Freathy
  • Beverley M Shields
  • Diana Pietzner
  • Rebecca Nagy
  • Linda Broer
  • Layal Chaker
  • Tim I M Korevaar
  • Maria Grazia Plia
  • Cinzia Sala
  • Uwe Völker
  • J Brent Richards
  • Fred C Sweep
  • Christian Gieger
  • Tanguy Corre
  • Eero Kajantie
  • Betina Thuesen
  • Youri E Taes
  • W Edward Visser
  • Andrew T Hattersley
  • Jürgen Kratzsch
  • Alexander Hamilton
  • Wei Li
  • Georg Homuth
  • Monia Lobina
  • Stefano Mariotti
  • Nicole Soranzo
  • Massimiliano Cocca
  • Matthias Nauck
  • Christin Spielhagen
  • Alec Ross
  • Alice Arnold
  • Martijn van de Bunt
  • Sandya Liyanarachchi
  • Margit Heier
  • Hans Jörgen Grabe
  • Corrado Masciullo
  • Tessel E Galesloot
  • Ee M Lim
  • Eva Reischl
  • Peter J Leedman
  • Sandra Lai
  • Alessandro Delitala
  • Alexandra P Bremner
  • David I W Philips
  • John P Beilby
  • Antonella Mulas
  • Matteo Vocale
  • Goncalo Abecasis
  • Tom Forsen
  • Alan James
  • Elisabeth Widen
  • Jennie Hui
  • Holger Prokisch
  • Ernst E Rietzschel
  • Aarno Palotie
  • Peter Feddema
  • Stephen J Fletcher
  • Katharina Schramm
  • Jerome I Rotter
  • Alexander Kluttig
  • Dörte Radke
  • Michela Traglia
  • Gabriela L Surdulescu
  • Huiling He
  • Jayne A Franklyn
  • Daniel Tiller
  • Bijay Vaidya
  • Tim de Meyer
  • Torben Jørgensen
  • Johan G Eriksson
  • Peter C O'Leary
  • Eric Wichmann
  • Ad R Hermus
  • Bruce M Psaty
  • Till Ittermann
  • Albert Hofman
  • Emanuele Bosi
  • David Schlessinger
  • Henri Wallaschofski
  • Nicola Pirastu
  • Yurii S Aulchenko
  • Albert de la Chapelle
  • Romana T Netea-Maier
  • Stephen C L Gough
  • Henriette Meyer zu Schwabedissen
  • Timothy M Frayling
  • Jean-Marc Kaufman
  • Allan Linneberg
  • Katri Räikkönen
  • Johannes W A Smit
  • Lambertus A Kiemeney
  • Fernando Rivadeneira
  • André G Uitterlinden
  • John P Walsh
  • Christa Meisinger
  • Martin den Heijer
  • Theo J Visser
  • Timothy D Spector
  • Scott G Wilson
  • Henry Völzke
  • Anne Cappola
  • Daniela Toniolo
  • Serena Sanna
  • Silvia Naitza
  • Robin P Peeters

Abstract

Autoimmune thyroid diseases (AITD) are common, affecting 2-5% of the general population. Individuals with positive thyroid peroxidase antibodies (TPOAbs) have an increased risk of autoimmune hypothyroidism (Hashimoto's thyroiditis), as well as autoimmune hyperthyroidism (Graves' disease). As the possible causative genes of TPOAbs and AITD remain largely unknown, we performed GWAS meta-analyses in 18,297 individuals for TPOAb-positivity (1769 TPOAb-positives and 16,528 TPOAb-negatives) and in 12,353 individuals for TPOAb serum levels, with replication in 8,990 individuals. Significant associations (P

Suggested Citation

  • Marco Medici & Eleonora Porcu & Giorgio Pistis & Alexander Teumer & Suzanne J Brown & Richard A Jensen & Rajesh Rawal & Greet L Roef & Theo S Plantinga & Sita H Vermeulen & Jari Lahti & Matthew J Simm, 2014. "Identification of Novel Genetic Loci Associated with Thyroid Peroxidase Antibodies and Clinical Thyroid Disease," PLOS Genetics, Public Library of Science, vol. 10(2), pages 1-13, February.
  • Handle: RePEc:plo:pgen00:1004123
    DOI: 10.1371/journal.pgen.1004123
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    References listed on IDEAS

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    1. Vincent Plagnol & Joanna M M Howson & Deborah J Smyth & Neil Walker & Jason P Hafler & Chris Wallace & Helen Stevens & Laura Jackson & Matthew J Simmonds & Type 1 Diabetes Genetics Consortium & Polly , 2011. "Genome-Wide Association Analysis of Autoantibody Positivity in Type 1 Diabetes Cases," PLOS Genetics, Public Library of Science, vol. 7(8), pages 1-9, August.
    2. Christian Gieger & Aparna Radhakrishnan & Ana Cvejic & Weihong Tang & Eleonora Porcu & Giorgio Pistis & Jovana Serbanovic-Canic & Ulrich Elling & Alison H. Goodall & Yann Labrune & Lorna M. Lopez & Re, 2011. "New gene functions in megakaryopoiesis and platelet formation," Nature, Nature, vol. 480(7376), pages 201-208, December.
    3. Eleonora Porcu & Marco Medici & Giorgio Pistis & Claudia B Volpato & Scott G Wilson & Anne R Cappola & Steffan D Bos & Joris Deelen & Martin den Heijer & Rachel M Freathy & Jari Lahti & Chunyu Liu & L, 2013. "A Meta-Analysis of Thyroid-Related Traits Reveals Novel Loci and Gender-Specific Differences in the Regulation of Thyroid Function," PLOS Genetics, Public Library of Science, vol. 9(2), pages 1-20, February.
    4. Soumya Raychaudhuri & Robert M Plenge & Elizabeth J Rossin & Aylwin C Y Ng & International Schizophrenia Consortium & Shaun M Purcell & Pamela Sklar & Edward M Scolnick & Ramnik J Xavier & David Altsh, 2009. "Identifying Relationships among Genomic Disease Regions: Predicting Genes at Pathogenic SNP Associations and Rare Deletions," PLOS Genetics, Public Library of Science, vol. 5(6), pages 1-15, June.
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