IDEAS home Printed from https://ideas.repec.org/a/oup/biomet/v109y2022i3p817-835..html
   My bibliography  Save this article

Generalized infinite factorization models
[A latent factor linear mixed model for high-dimensional longitudinal data analysis]

Author

Listed:
  • L Schiavon
  • A Canale
  • D B Dunson

Abstract

SummaryFactorization models express a statistical object of interest in terms of a collection of simpler objects. For example, a matrix or tensor can be expressed as a sum of rank-one components. In practice, however, it can be challenging to infer the number of components and the relative impact of the different components. A popular idea is to include infinitely many components whose impact decreases with the component index. This article is motivated by two limitations of such existing methods: (i) lack of careful consideration of the within-component sparsity structure; and (ii) not accommodating grouped variables and other nonexchangeable structures. We propose a general class of infinite factorization models that address these limitations. Theoretical support is provided, practical gains are demonstrated in simulation studies, and an ecology application focusing on modelling bird species occurrence is discussed.

Suggested Citation

  • L Schiavon & A Canale & D B Dunson, 2022. "Generalized infinite factorization models [A latent factor linear mixed model for high-dimensional longitudinal data analysis]," Biometrika, Biometrika Trust, vol. 109(3), pages 817-835.
    • Handle: RePEc:oup:biomet:v:109:y:2022:i:3:p:817-835.
    as

    Download full text from publisher

    File URL: http://hdl.handle.net/10.1093/biomet/asab056
    Download Restriction: Access to full text is restricted to subscribers.
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Carlos M. Carvalho & Nicholas G. Polson & James G. Scott, 2010. "The horseshoe estimator for sparse signals," Biometrika, Biometrika Trust, vol. 97(2), pages 465-480.
    2. Aßmann, Christian & Boysen-Hogrefe, Jens & Pape, Markus, 2016. "Bayesian analysis of static and dynamic factor models: An ex-post approach towards the rotation problem," Journal of Econometrics, Elsevier, vol. 192(1), pages 190-206.
    3. Veronika Ročková & Edward I. George, 2016. "Fast Bayesian Factor Analysis via Automatic Rotations to Sparsity," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(516), pages 1608-1622, October.
    4. Federico Ferrari & David B. Dunson, 2021. "Bayesian Factor Analysis for Inference on Interactions," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 116(535), pages 1521-1532, July.
    5. Durante, Daniele, 2017. "A note on the multiplicative gamma process," Statistics & Probability Letters, Elsevier, vol. 122(C), pages 198-204.
    6. Anirban Bhattacharya & Debdeep Pati & Natesh S. Pillai & David B. Dunson, 2015. "Dirichlet--Laplace Priors for Optimal Shrinkage," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(512), pages 1479-1490, December.
    7. repec:dau:papers:123456789/4648 is not listed on IDEAS
    8. Jeffrey W. Miller & Matthew T. Harrison, 2018. "Mixture Models With a Prior on the Number of Components," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 113(521), pages 340-356, January.
    9. Silvia Montagna & Surya T. Tokdar & Brian Neelon & David B. Dunson, 2012. "Bayesian Latent Factor Regression for Functional and Longitudinal Data," Biometrics, The International Biometric Society, vol. 68(4), pages 1064-1073, December.
    10. Ming Yuan & Yi Lin, 2006. "Model selection and estimation in regression with grouped variables," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 68(1), pages 49-67, February.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Marco, Nicholas & Şentürk, Damla & Jeste, Shafali & DiStefano, Charlotte C. & Dickinson, Abigail & Telesca, Donatello, 2024. "Flexible regularized estimation in high-dimensional mixed membership models," Computational Statistics & Data Analysis, Elsevier, vol. 194(C).

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Dimitris Korobilis & Kenichi Shimizu, 2022. "Bayesian Approaches to Shrinkage and Sparse Estimation," Foundations and Trends(R) in Econometrics, now publishers, vol. 11(4), pages 230-354, June.
    2. Simon Beyeler & Sylvia Kaufmann, 2021. "Reduced‐form factor augmented VAR—Exploiting sparsity to include meaningful factors," Journal of Applied Econometrics, John Wiley & Sons, Ltd., vol. 36(7), pages 989-1012, November.
    3. Jaejoon Lee & Seongil Jo & Jaeyong Lee, 2022. "Robust sparse Bayesian infinite factor models," Computational Statistics, Springer, vol. 37(5), pages 2693-2715, November.
    4. Kshitij Khare & Malay Ghosh, 2022. "MCMC Convergence for Global-Local Shrinkage Priors," Journal of Quantitative Economics, Springer;The Indian Econometric Society (TIES), vol. 20(1), pages 211-234, September.
    5. M. Carvalho & S. Pereira & P. Pereira & P. Zea Bermudez, 2022. "An Extreme Value Bayesian Lasso for the Conditional Left and Right Tails," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 27(2), pages 222-239, June.
    6. Kaito Shimamura & Shuichi Kawano, 2021. "Bayesian sparse convex clustering via global-local shrinkage priors," Computational Statistics, Springer, vol. 36(4), pages 2671-2699, December.
    7. Martin Feldkircher & Florian Huber & Gary Koop & Michael Pfarrhofer, 2022. "APPROXIMATE BAYESIAN INFERENCE AND FORECASTING IN HUGE‐DIMENSIONAL MULTICOUNTRY VARs," International Economic Review, Department of Economics, University of Pennsylvania and Osaka University Institute of Social and Economic Research Association, vol. 63(4), pages 1625-1658, November.
    8. Martin Guth, 2022. "Predicting Default Probabilities for Stress Tests: A Comparison of Models," Papers 2202.03110, arXiv.org.
    9. Chan, Joshua C.C., 2021. "Minnesota-type adaptive hierarchical priors for large Bayesian VARs," International Journal of Forecasting, Elsevier, vol. 37(3), pages 1212-1226.
    10. Debamita Kundu & Riten Mitra & Jeremy T. Gaskins, 2021. "Bayesian variable selection for multioutcome models through shared shrinkage," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 48(1), pages 295-320, March.
    11. Joshua Chan, 2023. "BVARs and Stochastic Volatility," Papers 2310.14438, arXiv.org.
    12. Virginia X. He & Matt P. Wand, 2024. "Bayesian generalized additive model selection including a fast variational option," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 108(3), pages 639-668, September.
    13. Hu, Guanyu, 2021. "Spatially varying sparsity in dynamic regression models," Econometrics and Statistics, Elsevier, vol. 17(C), pages 23-34.
    14. Jan Prüser & Florian Huber, 2024. "Nonlinearities in macroeconomic tail risk through the lens of big data quantile regressions," Journal of Applied Econometrics, John Wiley & Sons, Ltd., vol. 39(2), pages 269-291, March.
    15. Michael Pfarrhofer, 2024. "Forecasts with Bayesian vector autoregressions under real time conditions," Journal of Forecasting, John Wiley & Sons, Ltd., vol. 43(3), pages 771-801, April.
    16. Adrian Quintero & Emmanuel Lesaffre & Geert Verbeke, 2024. "Bayesian Exploratory Factor Analysis via Gibbs Sampling," Journal of Educational and Behavioral Statistics, , vol. 49(1), pages 121-142, February.
    17. Niko Hauzenberger & Michael Pfarrhofer & Luca Rossini, 2020. "Sparse time-varying parameter VECMs with an application to modeling electricity prices," Papers 2011.04577, arXiv.org, revised Apr 2023.
    18. Peter Knaus & Sylvia Fruhwirth-Schnatter, 2023. "The Dynamic Triple Gamma Prior as a Shrinkage Process Prior for Time-Varying Parameter Models," Papers 2312.10487, arXiv.org.
    19. Manfred M. Fischer & Niko Hauzenberger & Florian Huber & Michael Pfarrhofer, 2023. "General Bayesian time‐varying parameter vector autoregressions for modeling government bond yields," Journal of Applied Econometrics, John Wiley & Sons, Ltd., vol. 38(1), pages 69-87, January.
    20. Deborah Gefang & Stephen G. Hall & George S. Tavlas, 2023. "Identifying spatial interdependence in panel data with large N and small T," Papers 2309.03740, arXiv.org.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:oup:biomet:v:109:y:2022:i:3:p:817-835.. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Oxford University Press (email available below). General contact details of provider: https://academic.oup.com/biomet .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.