IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-46419-0.html
   My bibliography  Save this article

Natural variation of STKc_GSK3 kinase TaSG-D1 contributes to heat stress tolerance in Indian dwarf wheat

Author

Listed:
  • Jie Cao

    (China Agricultural University)

  • Zhen Qin

    (China Agricultural University)

  • Guangxian Cui

    (China Agricultural University)

  • Zhaoyan Chen

    (China Agricultural University)

  • Xuejiao Cheng

    (China Agricultural University)

  • Huiru Peng

    (China Agricultural University)

  • Yingyin Yao

    (China Agricultural University)

  • Zhaorong Hu

    (China Agricultural University)

  • Weilong Guo

    (China Agricultural University)

  • Zhongfu Ni

    (China Agricultural University)

  • Qixin Sun

    (China Agricultural University)

  • Mingming Xin

    (China Agricultural University)

Abstract

Heat stress threatens global wheat (Triticum aestivum) production, causing dramatic yield losses worldwide. Identifying heat tolerance genes and comprehending molecular mechanisms are essential. Here, we identify a heat tolerance gene, TaSG-D1E286K, in Indian dwarf wheat (Triticum sphaerococcum), which encodes an STKc_GSK3 kinase. TaSG-D1E286K improves heat tolerance compared to TaSG-D1 by enhancing phosphorylation and stability of downstream target TaPIF4 under heat stress condition. Additionally, we reveal evolutionary footprints of TaPIF4 during wheat selective breeding in China, that is, InDels predominantly occur in the TaPIF4 promoter of Chinese modern wheat cultivars and result in decreased expression level of TaPIF4 in response to heat stress. These sequence variations with negative effect on heat tolerance are mainly introduced from European germplasm. Our study provides insight into heat stress response mechanisms and proposes a potential strategy to improve wheat heat tolerance in future.

Suggested Citation

  • Jie Cao & Zhen Qin & Guangxian Cui & Zhaoyan Chen & Xuejiao Cheng & Huiru Peng & Yingyin Yao & Zhaorong Hu & Weilong Guo & Zhongfu Ni & Qixin Sun & Mingming Xin, 2024. "Natural variation of STKc_GSK3 kinase TaSG-D1 contributes to heat stress tolerance in Indian dwarf wheat," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-46419-0
    DOI: 10.1038/s41467-024-46419-0
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-46419-0
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-024-46419-0?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Miguel de Lucas & Jean-Michel Davière & Mariana Rodríguez-Falcón & Mariela Pontin & Juan Manuel Iglesias-Pedraz & Séverine Lorrain & Christian Fankhauser & Miguel Angel Blázquez & Elena Titarenko & Sa, 2008. "A molecular framework for light and gibberellin control of cell elongation," Nature, Nature, vol. 451(7177), pages 480-484, January.
    2. Sara Kim & Geonhee Hwang & Soohwan Kim & Thom Nguyen Thi & Hanim Kim & Jinkil Jeong & Jaewook Kim & Jungmook Kim & Giltsu Choi & Eunkyoo Oh, 2020. "The epidermis coordinates thermoresponsive growth through the phyB-PIF4-auxin pathway," Nature Communications, Nature, vol. 11(1), pages 1-13, December.
    3. Weilong Guo & Mingming Xin & Zihao Wang & Yingyin Yao & Zhaorong Hu & Wanjun Song & Kuohai Yu & Yongming Chen & Xiaobo Wang & Panfeng Guan & Rudi Appels & Huiru Peng & Zhongfu Ni & Qixin Sun, 2020. "Origin and adaptation to high altitude of Tibetan semi-wild wheat," Nature Communications, Nature, vol. 11(1), pages 1-12, December.
    4. S. Asseng & F. Ewert & P. Martre & R. P. Rötter & D. B. Lobell & D. Cammarano & B. A. Kimball & M. J. Ottman & G. W. Wall & J. W. White & M. P. Reynolds & P. D. Alderman & P. V. V. Prasad & P. K. Agga, 2015. "Rising temperatures reduce global wheat production," Nature Climate Change, Nature, vol. 5(2), pages 143-147, February.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Zihao Wang & Wenxi Wang & Xiaoming Xie & Yongfa Wang & Zhengzhao Yang & Huiru Peng & Mingming Xin & Yingyin Yao & Zhaorong Hu & Jie Liu & Zhenqi Su & Chaojie Xie & Baoyun Li & Zhongfu Ni & Qixin Sun &, 2022. "Dispersed emergence and protracted domestication of polyploid wheat uncovered by mosaic ancestral haploblock inference," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    2. Chakravarty, Shourish & Villoria, Nelson B., 2020. "Estimating the spatially heterogeneous elasticities of land supply to U.S. crop agriculture," Conference papers 333156, Purdue University, Center for Global Trade Analysis, Global Trade Analysis Project.
    3. Carl-Friedrich Schleussner & Joeri Rogelj & Michiel Schaeffer & Tabea Lissner & Rachel Licker & Erich M. Fischer & Reto Knutti & Anders Levermann & Katja Frieler & William Hare, 2016. "Science and policy characteristics of the Paris Agreement temperature goal," Nature Climate Change, Nature, vol. 6(9), pages 827-835, September.
    4. repec:zib:zbppsc:v:1:y:2021:i:1:p:4-7 is not listed on IDEAS
    5. Haidong Zhao & Lina Zhang & M. B. Kirkham & Stephen M. Welch & John W. Nielsen-Gammon & Guihua Bai & Jiebo Luo & Daniel A. Andresen & Charles W. Rice & Nenghan Wan & Romulo P. Lollato & Dianfeng Zheng, 2022. "U.S. winter wheat yield loss attributed to compound hot-dry-windy events," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
    6. Dilshad Ahmad & Malika Kanwal & Muhammad Afzal, 2023. "Climate change effects on riverbank erosion Bait community flood-prone area of Punjab, Pakistan: an application of livelihood vulnerability index," Environment, Development and Sustainability: A Multidisciplinary Approach to the Theory and Practice of Sustainable Development, Springer, vol. 25(9), pages 9387-9415, September.
    7. Tan, Lili & Feng, Puyu & Li, Baoguo & Huang, Feng & Liu, De Li & Ren, Pinpin & Liu, Haipeng & Srinivasan, Raghavan & Chen, Yong, 2022. "Climate change impacts on crop water productivity and net groundwater use under a double-cropping system with intensive irrigation in the Haihe River Basin, China," Agricultural Water Management, Elsevier, vol. 266(C).
    8. Sergio M. Vicente‐Serrano & Tim R. McVicar & Diego G. Miralles & Yuting Yang & Miquel Tomas‐Burguera, 2020. "Unraveling the influence of atmospheric evaporative demand on drought and its response to climate change," Wiley Interdisciplinary Reviews: Climate Change, John Wiley & Sons, vol. 11(2), March.
    9. Xiang Chen & lvzhou Liu & Hongmei Cai & Baoqiang Zheng & Jincai Li, 2024. "Effects of spring low-temperature stress on winter wheat seed-setting characteristics of spike," Plant, Soil and Environment, Czech Academy of Agricultural Sciences, vol. 70(2), pages 84-92.
    10. Hao, Shirui & Ryu, Dongryeol & Western, Andrew & Perry, Eileen & Bogena, Heye & Franssen, Harrie Jan Hendricks, 2021. "Performance of a wheat yield prediction model and factors influencing the performance: A review and meta-analysis," Agricultural Systems, Elsevier, vol. 194(C).
    11. Gaupp, Franziska & Hall, Jim & Mitchell, Dann & Dadson, Simon, 2019. "Increasing risks of multiple breadbasket failure under 1.5 and 2 °C global warming," Agricultural Systems, Elsevier, vol. 175(C), pages 34-45.
    12. Xiao, Dengpan & Liu, De Li & Wang, Bin & Feng, Puyu & Bai, Huizi & Tang, Jianzhao, 2020. "Climate change impact on yields and water use of wheat and maize in the North China Plain under future climate change scenarios," Agricultural Water Management, Elsevier, vol. 238(C).
    13. Zimmermann, Andrea & Webber, Heidi & Zhao, Gang & Ewert, Frank & Kros, Johannes & Wolf, Joost & Britz, Wolfgang & de Vries, Wim, 2017. "Climate change impacts on crop yields, land use and environment in response to crop sowing dates and thermal time requirements," Agricultural Systems, Elsevier, vol. 157(C), pages 81-92.
    14. Bihai Shi & Amelia Felipo-Benavent & Guillaume Cerutti & Carlos Galvan-Ampudia & Lucas Jilli & Geraldine Brunoud & Jérome Mutterer & Elody Vallet & Lali Sakvarelidze-Achard & Jean-Michel Davière & Ale, 2024. "A quantitative gibberellin signaling biosensor reveals a role for gibberellins in internode specification at the shoot apical meristem," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
    15. Tomoko Hasegawa & Shinichiro Fujimori & Petr Havlík & Hugo Valin & Benjamin Leon Bodirsky & Jonathan C. Doelman & Thomas Fellmann & Page Kyle & Jason F. L. Koopman & Hermann Lotze-Campen & Daniel Maso, 2018. "Risk of increased food insecurity under stringent global climate change mitigation policy," Nature Climate Change, Nature, vol. 8(8), pages 699-703, August.
    16. M. Mehedi Hasan & Mohammad Alauddin & Md. Abdur Rashid Sarker & Mohammad Jakaria & Mahiuddin Alamgir, 2018. "Climate sensitivity of wheat yield in Bangladesh: Implications for Sustainable Development Goals 2 (SDG2) and 6 (SDG6)," Discussion Papers Series 599, School of Economics, University of Queensland, Australia.
    17. Martínez-Salgueiro, Andrea & Tarrazón-Rodón, María-Antonia, 2020. "Is diversification effective in reducing the systemic risk implied by a market for weather index-based insurance in Spain?," MPRA Paper 119924, University Library of Munich, Germany, revised 19 May 2021.
    18. A. Mukherjee & S. Saha & S. C. Lellyett & (corresponding author) A.K.S. Huda, 2022. "Impact Of Climate Change And Variability On Food Security In The Asia-Pacific Region," Asia-Pacific Sustainable Development Journal, United Nations Economic and Social Commission for Asia and the Pacific (ESCAP), vol. 29(1), pages 119-141, May.
    19. Ibrahim Sufiyan & M.K. Dahiru & Mohammed Alkali, 2022. "Geospatial Trend Analysis Of Rain-Fed And Irrigation Practices For Crops Yield Improvement In Kura And Minjibir, Kano Sate, Nigeria," Tropical Agrobiodiversity (TRAB), Zibeline International Publishing, vol. 3(1), pages 16-20, May.
    20. Ting Fung Ma & Fangfang Wang & Jun Zhu & Anthony R. Ives & Katarzyna E. Lewińska, 2023. "Scalable Semiparametric Spatio-temporal Regression for Large Data Analysis," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 28(2), pages 279-298, June.
    21. Yun, Kyungdahm & Hsiao, Jennifer & Jung, Myung-Pyo & Choi, In-Tae & Glenn, D. Michael & Shim, Kyo-Moon & Kim, Soo-Hyung, 2017. "Can a multi-model ensemble improve phenology predictions for climate change studies?," Ecological Modelling, Elsevier, vol. 362(C), pages 54-64.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-46419-0. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.