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A global-temporal analysis on Phytophthora sojae resistance-gene efficacy

Author

Listed:
  • Austin G. McCoy

    (Michigan State University)

  • Richard R. Belanger

    (Université Laval)

  • Carl A. Bradley

    (University of Kentucky)

  • Daniel G. Cerritos-Garcia

    (University of Connecticut)

  • Vinicius C. Garnica

    (North Carolina State University)

  • Loren J. Giesler

    (University of Nebraska-Lincoln)

  • Pablo E. Grijalba

    (Universidad de Buenos Aires)

  • Eduardo Guillin

    (Instituto Nacional de Tecnologia Agropecuaria)

  • Maria A. Henriquez

    (Agriculture and Agri-Food Canada)

  • Yong Min Kim

    (Agriculture and Agri-Food Canada)

  • Dean K. Malvick

    (University of Minnesota)

  • Rashelle L. Matthiesen

    (Iowa State University)

  • Santiago X. Mideros

    (University of Illinois at Urbana-Champaign)

  • Zachary A. Noel

    (Auburn University)

  • Alison E. Robertson

    (Iowa State University)

  • Mitchell G. Roth

    (The Ohio State University-Wooster)

  • Clarice L. Schmidt

    (Iowa State University)

  • Damon L. Smith

    (University of Wisconsin-Madison)

  • Adam H. Sparks

    (Department of Primary Industries and Regional Development
    University of Southern Queensland)

  • Darcy E. P. Telenko

    (Purdue University)

  • Vanessa Tremblay

    (Université Laval)

  • Owen Wally

    (Agriculture and Agri-Food Canada)

  • Martin I. Chilvers

    (Michigan State University)

Abstract

Plant disease resistance genes are widely used in agriculture to reduce disease outbreaks and epidemics and ensure global food security. In soybean, Rps (Resistance to Phytophthora sojae) genes are used to manage Phytophthora sojae, a major oomycete pathogen that causes Phytophthora stem and root rot (PRR) worldwide. This study aims to identify temporal changes in P. sojae pathotype complexity, diversity, and Rps gene efficacy. Pathotype data was collected from 5121 isolates of P. sojae, derived from 29 surveys conducted between 1990 and 2019 across the United States, Argentina, Canada, and China. This systematic review shows a loss of efficacy of specific Rps genes utilized for disease management and a significant increase in the pathotype diversity of isolates over time. This study finds that the most widely deployed Rps genes used to manage PRR globally, Rps1a, Rps1c and Rps1k, are no longer effective for PRR management in the United States, Argentina, and Canada. This systematic review emphasizes the need to widely introduce new sources of resistance to P. sojae, such as Rps3a, Rps6, or Rps11, into commercial cultivars to effectively manage PRR going forward.

Suggested Citation

  • Austin G. McCoy & Richard R. Belanger & Carl A. Bradley & Daniel G. Cerritos-Garcia & Vinicius C. Garnica & Loren J. Giesler & Pablo E. Grijalba & Eduardo Guillin & Maria A. Henriquez & Yong Min Kim &, 2023. "A global-temporal analysis on Phytophthora sojae resistance-gene efficacy," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-41321-7
    DOI: 10.1038/s41467-023-41321-7
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    References listed on IDEAS

    as
    1. A. Dreiseitl, 2003. "Adaptation of Blumeria graminis f.sp. hordei to barley resistance genes in the Czech Republic in 1971-2000," Plant, Soil and Environment, Czech Academy of Agricultural Sciences, vol. 49(6), pages 241-248.
    2. Dinah Qutob & B. Patrick Chapman & Mark Gijzen, 2013. "Transgenerational gene silencing causes gain of virulence in a plant pathogen," Nature Communications, Nature, vol. 4(1), pages 1-6, June.
    3. Weidong Wang & Liyang Chen & Kevin Fengler & Joy Bolar & Victor Llaca & Xutong Wang & Chancelor B. Clark & Tomara J. Fleury & Jon Myrvold & David Oneal & Maria Magdalena Dyk & Ashley Hudson & Jesse Mu, 2021. "A giant NLR gene confers broad-spectrum resistance to Phytophthora sojae in soybean," Nature Communications, Nature, vol. 12(1), pages 1-8, December.
    4. Goutam Konapala & Ashok K. Mishra & Yoshihide Wada & Michael E. Mann, 2020. "Climate change will affect global water availability through compounding changes in seasonal precipitation and evaporation," Nature Communications, Nature, vol. 11(1), pages 1-10, December.
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