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The COG1-OsSERL2 complex senses cold to trigger signaling network for chilling tolerance in japonica rice

Author

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  • Changxuan Xia

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences
    Beijing Academy of Agricultural and Forestry Sciences)

  • Guohua Liang

    (Yangzhou University)

  • Kang Chong

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Yunyuan Xu

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

Abstract

Improvement of chilling tolerance is a key strategy to face potential menace from abnormal temperature in rice production, which depends on the signaling network triggered by receptors. However, little is known about the QTL genes encoding membrane complexes for sensing cold. Here, Chilling-tolerance in Gengdao/japonica rice 1 (COG1) is isolated from a chromosome segment substitution line containing a QTL (qCS11-jap) for chilling sensitivity. The major gene COG1 is found to confer chilling tolerance in japonica rice. In natural rice populations, only the haplogroup1 encodes a functional COG1. Evolutionary analysis show that COG1 originates from Chinese O. Rufipogon and is fixed in japonica rice during domestication. COG1, a membrane-localized LRR-RLP, targets and activates the kinase OsSERL2 in a cold-induced manner, promoting chilling tolerance. Furthermore, the cold signal transmitted by COG1-OsSERL2 activates OsMAPK3 in the cytoplasm. Our findings reveal a cold-sensing complex, which mediates signaling network for the chilling defense in rice.

Suggested Citation

  • Changxuan Xia & Guohua Liang & Kang Chong & Yunyuan Xu, 2023. "The COG1-OsSERL2 complex senses cold to trigger signaling network for chilling tolerance in japonica rice," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
    • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-38860-4
    DOI: 10.1038/s41467-023-38860-4
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    1. Artemis Perraki & Thomas A. DeFalco & Paul Derbyshire & Julian Avila & David Séré & Jan Sklenar & Xingyun Qi & Lena Stransfeld & Benjamin Schwessinger & Yasuhiro Kadota & Alberto P. Macho & Shushu Jia, 2018. "Phosphocode-dependent functional dichotomy of a common co-receptor in plant signalling," Nature, Nature, vol. 561(7722), pages 248-252, September.
    2. Wensheng Wang & Ramil Mauleon & Zhiqiang Hu & Dmytro Chebotarov & Shuaishuai Tai & Zhichao Wu & Min Li & Tianqing Zheng & Roven Rommel Fuentes & Fan Zhang & Locedie Mansueto & Dario Copetti & Millicen, 2018. "Genomic variation in 3,010 diverse accessions of Asian cultivated rice," Nature, Nature, vol. 557(7703), pages 43-49, May.
    3. Xuehui Huang & Nori Kurata & Xinghua Wei & Zi-Xuan Wang & Ahong Wang & Qiang Zhao & Yan Zhao & Kunyan Liu & Hengyun Lu & Wenjun Li & Yunli Guo & Yiqi Lu & Congcong Zhou & Danlin Fan & Qijun Weng & Chu, 2012. "A map of rice genome variation reveals the origin of cultivated rice," Nature, Nature, vol. 490(7421), pages 497-501, October.
    4. Artemis Perraki & Thomas A. DeFalco & Paul Derbyshire & Julian Avila & David Séré & Jan Sklenar & Xingyun Qi & Lena Stransfeld & Benjamin Schwessinger & Yasuhiro Kadota & Alberto P. Macho & Shushu Jia, 2018. "Author Correction: Phosphocode-dependent functional dichotomy of a common co-receptor in plant signalling," Nature, Nature, vol. 563(7733), pages 30-30, November.
    5. Bo Li & Marco Aurélio Ferreira & Mengling Huang & Luiz Fernando Camargos & Xiao Yu & Ruan M. Teixeira & Paola A. Carpinetti & Giselle C. Mendes & Bianca C. Gouveia-Mageste & Chenglong Liu & Claudia S., 2019. "The receptor-like kinase NIK1 targets FLS2/BAK1 immune complex and inversely modulates antiviral and antibacterial immunity," Nature Communications, Nature, vol. 10(1), pages 1-14, December.
    6. Zhanying Zhang & Jinjie Li & Yinghua Pan & Jilong Li & Lei zhou & Hongli Shi & Yawen Zeng & Haifeng Guo & Shuming Yang & Weiwei Zheng & Jianping Yu & Xingming Sun & Gangling Li & Yanglin Ding & Liang , 2017. "Natural variation in CTB4a enhances rice adaptation to cold habitats," Nature Communications, Nature, vol. 8(1), pages 1-13, April.
    7. Yue Sun & Yan Wang & Xiaoxiao Zhang & Zhaodan Chen & Yeqiang Xia & Lei Wang & Yujing Sun & Mingmei Zhang & Yu Xiao & Zhifu Han & Yuanchao Wang & Jijie Chai, 2022. "Plant receptor-like protein activation by a microbial glycoside hydrolase," Nature, Nature, vol. 610(7931), pages 335-342, October.
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