IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v14y2023i1d10.1038_s41467-023-38860-4.html
   My bibliography  Save this article

The COG1-OsSERL2 complex senses cold to trigger signaling network for chilling tolerance in japonica rice

Author

Listed:
  • Changxuan Xia

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences
    Beijing Academy of Agricultural and Forestry Sciences)

  • Guohua Liang

    (Yangzhou University)

  • Kang Chong

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Yunyuan Xu

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

Abstract

Improvement of chilling tolerance is a key strategy to face potential menace from abnormal temperature in rice production, which depends on the signaling network triggered by receptors. However, little is known about the QTL genes encoding membrane complexes for sensing cold. Here, Chilling-tolerance in Gengdao/japonica rice 1 (COG1) is isolated from a chromosome segment substitution line containing a QTL (qCS11-jap) for chilling sensitivity. The major gene COG1 is found to confer chilling tolerance in japonica rice. In natural rice populations, only the haplogroup1 encodes a functional COG1. Evolutionary analysis show that COG1 originates from Chinese O. Rufipogon and is fixed in japonica rice during domestication. COG1, a membrane-localized LRR-RLP, targets and activates the kinase OsSERL2 in a cold-induced manner, promoting chilling tolerance. Furthermore, the cold signal transmitted by COG1-OsSERL2 activates OsMAPK3 in the cytoplasm. Our findings reveal a cold-sensing complex, which mediates signaling network for the chilling defense in rice.

Suggested Citation

  • Changxuan Xia & Guohua Liang & Kang Chong & Yunyuan Xu, 2023. "The COG1-OsSERL2 complex senses cold to trigger signaling network for chilling tolerance in japonica rice," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
    • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-38860-4
    DOI: 10.1038/s41467-023-38860-4
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-023-38860-4
    File Function: Abstract
    Download Restriction: no
    File URL: https://libkey.io/10.1038/s41467-023-38860-4?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Artemis Perraki & Thomas A. DeFalco & Paul Derbyshire & Julian Avila & David Séré & Jan Sklenar & Xingyun Qi & Lena Stransfeld & Benjamin Schwessinger & Yasuhiro Kadota & Alberto P. Macho & Shushu Jia, 2018. "Phosphocode-dependent functional dichotomy of a common co-receptor in plant signalling," Nature, Nature, vol. 561(7722), pages 248-252, September.
    2. Artemis Perraki & Thomas A. DeFalco & Paul Derbyshire & Julian Avila & David Séré & Jan Sklenar & Xingyun Qi & Lena Stransfeld & Benjamin Schwessinger & Yasuhiro Kadota & Alberto P. Macho & Shushu Jia, 2018. "Author Correction: Phosphocode-dependent functional dichotomy of a common co-receptor in plant signalling," Nature, Nature, vol. 563(7733), pages 30-30, November.
    3. Bo Li & Marco Aurélio Ferreira & Mengling Huang & Luiz Fernando Camargos & Xiao Yu & Ruan M. Teixeira & Paola A. Carpinetti & Giselle C. Mendes & Bianca C. Gouveia-Mageste & Chenglong Liu & Claudia S., 2019. "The receptor-like kinase NIK1 targets FLS2/BAK1 immune complex and inversely modulates antiviral and antibacterial immunity," Nature Communications, Nature, vol. 10(1), pages 1-14, December.
    4. Wensheng Wang & Ramil Mauleon & Zhiqiang Hu & Dmytro Chebotarov & Shuaishuai Tai & Zhichao Wu & Min Li & Tianqing Zheng & Roven Rommel Fuentes & Fan Zhang & Locedie Mansueto & Dario Copetti & Millicen, 2018. "Genomic variation in 3,010 diverse accessions of Asian cultivated rice," Nature, Nature, vol. 557(7703), pages 43-49, May.
    5. Zhanying Zhang & Jinjie Li & Yinghua Pan & Jilong Li & Lei zhou & Hongli Shi & Yawen Zeng & Haifeng Guo & Shuming Yang & Weiwei Zheng & Jianping Yu & Xingming Sun & Gangling Li & Yanglin Ding & Liang , 2017. "Natural variation in CTB4a enhances rice adaptation to cold habitats," Nature Communications, Nature, vol. 8(1), pages 1-13, April.
    6. Xuehui Huang & Nori Kurata & Xinghua Wei & Zi-Xuan Wang & Ahong Wang & Qiang Zhao & Yan Zhao & Kunyan Liu & Hengyun Lu & Wenjun Li & Yunli Guo & Yiqi Lu & Congcong Zhou & Danlin Fan & Qijun Weng & Chu, 2012. "A map of rice genome variation reveals the origin of cultivated rice," Nature, Nature, vol. 490(7421), pages 497-501, October.
    7. Yue Sun & Yan Wang & Xiaoxiao Zhang & Zhaodan Chen & Yeqiang Xia & Lei Wang & Yujing Sun & Mingmei Zhang & Yu Xiao & Zhifu Han & Yuanchao Wang & Jijie Chai, 2022. "Plant receptor-like protein activation by a microbial glycoside hydrolase," Nature, Nature, vol. 610(7931), pages 335-342, October.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Rujia Chen & Ning Xiao & Yue Lu & Tianyun Tao & Qianfeng Huang & Shuting Wang & Zhichao Wang & Mingli Chuan & Qing Bu & Zhou Lu & Hanyao Wang & Yanze Su & Yi Ji & Jianheng Ding & Ahmed Gharib & Huixin, 2023. "A de novo evolved gene contributes to rice grain shape difference between indica and japonica," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    2. Daiqi Wang & Hongru Wang & Xiaomei Xu & Man Wang & Yahuan Wang & Hong Chen & Fei Ping & Huanhuan Zhong & Zhengkun Mu & Wantong Xie & Xiangyu Li & Jingbin Feng & Milan Zhang & Zhilan Fan & Tifeng Yang , 2023. "Two complementary genes in a presence-absence variation contribute to indica-japonica reproductive isolation in rice," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
    3. Xingming Sun & Haiyan Xiong & Conghui Jiang & Dongmei Zhang & Zengling Yang & Yuanping Huang & Wanbin Zhu & Shuaishuai Ma & Junzhi Duan & Xin Wang & Wei Liu & Haifeng Guo & Gangling Li & Jiawei Qi & C, 2022. "Natural variation of DROT1 confers drought adaptation in upland rice," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
    4. Dunpin Xiong & Juan Wang & Ruci Wang & Yueming Wang & Yi Li & Ge Sun & Shanguo Yao, 2024. "A point mutation in VIG1 boosts development and chilling tolerance in rice," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    5. Seung Young Lee & Hyun-Sook Lee & Chang-Min Lee & Su-Kyung Ha & Hyang-Mi Park & So-Myeong Lee & Youngho Kwon & Ji-Ung Jeung & Youngjun Mo, 2023. "Multi-Environment Trials and Stability Analysis for Yield-Related Traits of Commercial Rice Cultivars," Agriculture, MDPI, vol. 13(2), pages 1-13, January.
    6. Xiaofeng Cai & Xuepeng Sun & Chenxi Xu & Honghe Sun & Xiaoli Wang & Chenhui Ge & Zhonghua Zhang & Quanxi Wang & Zhangjun Fei & Chen Jiao & Quanhua Wang, 2021. "Genomic analyses provide insights into spinach domestication and the genetic basis of agronomic traits," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
    7. Chew, Soo Hong & Ebstein, Richard P. & Lu, Yunfeng, 2023. "Rice culture and the cushion hypothesis: Experimental evidence from incentivized risk taking tasks," Economics Letters, Elsevier, vol. 223(C).
    8. Hideki Yoshida & Ko Hirano & Kenji Yano & Fanmiao Wang & Masaki Mori & Mayuko Kawamura & Eriko Koketsu & Masako Hattori & Reynante Lacsamana Ordonio & Peng Huang & Eiji Yamamoto & Makoto Matsuoka, 2022. "Genome-wide association study identifies a gene responsible for temperature-dependent rice germination," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
    9. Yu Chen & Amy Y. Wang & Courtney A. Barkley & Yixin Zhang & Xinyang Zhao & Min Gao & Mick D. Edmonds & Zechen Chong, 2023. "Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
    10. Zihao Wang & Wenxi Wang & Xiaoming Xie & Yongfa Wang & Zhengzhao Yang & Huiru Peng & Mingming Xin & Yingyin Yao & Zhaorong Hu & Jie Liu & Zhenqi Su & Chaojie Xie & Baoyun Li & Zhongfu Ni & Qixin Sun &, 2022. "Dispersed emergence and protracted domestication of polyploid wheat uncovered by mosaic ancestral haploblock inference," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    11. Elisa Zampieri & Michele Pesenti & Fabio Francesco Nocito & Gian Attilio Sacchi & Giampiero Valè, 2023. "Rice Responses to Water Limiting Conditions: Improving Stress Management by Exploiting Genetics and Physiological Processes," Agriculture, MDPI, vol. 13(2), pages 1-23, February.
    12. Yingyan Yu & Zhen Zhang & Xiaorui Dong & Ruixin Yang & Zhongqu Duan & Zhen Xiang & Jun Li & Guichao Li & Fazhe Yan & Hongzhang Xue & Du Jiao & Jinyuan Lu & Huimin Lu & Wenmin Zhang & Yangzhen Wei & Sh, 2022. "Pangenomic analysis of Chinese gastric cancer," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
    13. Yajun Gou & Yueqin Heng & Wenyan Ding & Canhong Xu & Qiushuang Tan & Yajing Li & Yudong Fang & Xiaoqing Li & Degui Zhou & Xinyu Zhu & Mingyue Zhang & Rongjian Ye & Haiyang Wang & Rongxin Shen, 2024. "Natural variation in OsMYB8 confers diurnal floret opening time divergence between indica and japonica subspecies," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    14. Bin Yang & Jiali Zeng & Shaona Chen & Shengyu Li & Longmei Wu & Xiaorong Wan, 2022. "Genome-Wide Association Study Reveals the Genetic Basis of Seed Germination in Japonica Rice," Agriculture, MDPI, vol. 13(1), pages 1-14, December.
    15. Decha Songtoasesakul & Wanchana Aesomnuk & Sarinthip Pannak & Jonaliza Lanceras Siangliw & Meechai Siangliw & Theerayut Toojinda & Samart Wanchana & Siwaret Arikit, 2023. "QTL-seq Identifies Pokkali-Derived QTLs and Candidate Genes for Salt Tolerance at Seedling Stage in Rice ( Oryza sativa L.)," Agriculture, MDPI, vol. 13(8), pages 1-15, August.
    16. Tao Zhu & Chunjiao Xia & Ranran Yu & Xinkai Zhou & Xingbing Xu & Lin Wang & Zhanxiang Zong & Junjiao Yang & Yinmeng Liu & Luchang Ming & Yuxin You & Dijun Chen & Weibo Xie, 2024. "Comprehensive mapping and modelling of the rice regulome landscape unveils the regulatory architecture underlying complex traits," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    17. Chuanzhong Zhang & Hongru Wang & Xiaojie Tian & Xinyan Lin & Yunfei Han & Zhongmin Han & Hanjing Sha & Jia Liu & Jianfeng Liu & Jian Zhang & Qingyun Bu & Jun Fang, 2024. "A transposon insertion in the promoter of OsUBC12 enhances cold tolerance during japonica rice germination," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    18. Xiaojuan Fan & Yongtao Cui & Jian Song & Honghuan Fan & Liqun Tang & Jianjun Wang, 2024. "Preliminary Exploration of Physiology and Genetic Basis Underlying High Yield in Indica–Japonica Hybrid Rice," Agriculture, MDPI, vol. 14(4), pages 1-12, April.
    19. Ting Wang & Shiyao Duan & Chen Xu & Yi Wang & Xinzhong Zhang & Xuefeng Xu & Liyang Chen & Zhenhai Han & Ting Wu, 2023. "Pan-genome analysis of 13 Malus accessions reveals structural and sequence variations associated with fruit traits," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
    20. Jingfen Huang & Yilin Zhang & Yapeng Li & Meng Xing & Cailin Lei & Shizhuang Wang & Yamin Nie & Yanyan Wang & Mingchao Zhao & Zhenyun Han & Xianjun Sun & Han Zhou & Yan Wang & Xiaoming Zheng & Xiaoron, 2024. "Haplotype-resolved gapless genome and chromosome segment substitution lines facilitate gene identification in wild rice," Nature Communications, Nature, vol. 15(1), pages 1-15, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-38860-4. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.