Merging enzymatic and synthetic chemistry with computational synthesis planning
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DOI: 10.1038/s41467-022-35422-y
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- Tyler P. Korman & Paul H. Opgenorth & James U. Bowie, 2017. "A synthetic biochemistry platform for cell free production of monoterpenes from glucose," Nature Communications, Nature, vol. 8(1), pages 1-8, August.
- Marwin H. S. Segler & Mike Preuss & Mark P. Waller, 2018. "Planning chemical syntheses with deep neural networks and symbolic AI," Nature, Nature, vol. 555(7698), pages 604-610, March.
- Barbara Mikulak-Klucznik & Patrycja Gołębiowska & Alison A. Bayly & Oskar Popik & Tomasz Klucznik & Sara Szymkuć & Ewa P. Gajewska & Piotr Dittwald & Olga Staszewska-Krajewska & Wiktor Beker & Tomasz , 2020. "Computational planning of the synthesis of complex natural products," Nature, Nature, vol. 588(7836), pages 83-88, December.
- Shuangjia Zheng & Tao Zeng & Chengtao Li & Binghong Chen & Connor W. Coley & Yuedong Yang & Ruibo Wu, 2022. "Deep learning driven biosynthetic pathways navigation for natural products with BioNavi-NP," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
- Daniel Probst & Matteo Manica & Yves Gaetan Nana Teukam & Alessandro Castrogiovanni & Federico Paratore & Teodoro Laino, 2022. "Biocatalysed synthesis planning using data-driven learning," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
- Xiaozhou Luo & Michael A. Reiter & Leo d’Espaux & Jeff Wong & Charles M. Denby & Anna Lechner & Yunfeng Zhang & Adrian T. Grzybowski & Simon Harth & Weiyin Lin & Hyunsu Lee & Changhua Yu & John Shin &, 2019. "Complete biosynthesis of cannabinoids and their unnatural analogues in yeast," Nature, Nature, vol. 567(7746), pages 123-126, March.
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