Global landscape of replicative DNA polymerase usage in the human genome
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DOI: 10.1038/s41467-022-34929-8
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- Karel Naiman & Eduard Campillo-Funollet & Adam T. Watson & Alice Budden & Izumi Miyabe & Antony M. Carr, 2021. "Replication dynamics of recombination-dependent replication forks," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
- Anne Fernandez-Vidal & Laure Guitton-Sert & Jean-Charles Cadoret & Marjorie Drac & Etienne Schwob & Giuseppe Baldacci & Christophe Cazaux & Jean-Sébastien Hoffmann, 2014. "A role for DNA polymerase θ in the timing of DNA replication," Nature Communications, Nature, vol. 5(1), pages 1-10, September.
- Nataliya Petryk & Malik Kahli & Yves d'Aubenton-Carafa & Yan Jaszczyszyn & Yimin Shen & Maud Silvain & Claude Thermes & Chun-Long Chen & Olivier Hyrien, 2016. "Replication landscape of the human genome," Nature Communications, Nature, vol. 7(1), pages 1-13, April.
- Daniel J. Emerson & Peiyao A. Zhao & Ashley L. Cook & R. Jordan Barnett & Kyle N. Klein & Dalila Saulebekova & Chunmin Ge & Linda Zhou & Zoltan Simandi & Miriam K. Minsk & Katelyn R. Titus & Weitao Wa, 2022. "Cohesin-mediated loop anchors confine the locations of human replication origins," Nature, Nature, vol. 606(7915), pages 812-819, June.
- Haizhen Long & Liwei Zhang & Mengjie Lv & Zengqi Wen & Wenhao Zhang & Xiulan Chen & Peitao Zhang & Tongqing Li & Luyuan Chang & Caiwei Jin & Guozhao Wu & Xi Wang & Fuquan Yang & Jianfeng Pei & Ping Ch, 2020. "H2A.Z facilitates licensing and activation of early replication origins," Nature, Nature, vol. 577(7791), pages 576-581, January.
- Xiaowen Zhang & Huai-Chin Chiang & Yao Wang & Chi Zhang & Sabrina Smith & Xiayan Zhao & Sreejith J. Nair & Joel Michalek & Ismail Jatoi & Meeghan Lautner & Boyce Oliver & Howard Wang & Anna Petit & Te, 2017. "Attenuation of RNA polymerase II pausing mitigates BRCA1-associated R-loop accumulation and tumorigenesis," Nature Communications, Nature, vol. 8(1), pages 1-12, August.
- V. O. Chagin & C. S. Casas-Delucchi & M. Reinhart & L. Schermelleh & Y. Markaki & A. Maiser & J. J. Bolius & A. Bensimon & M. Fillies & P. Domaing & Y. M. Rozanov & H. Leonhardt & M. C. Cardoso, 2016. "4D Visualization of replication foci in mammalian cells corresponding to individual replicons," Nature Communications, Nature, vol. 7(1), pages 1-12, September.
- Aisha Yesbolatova & Yuichiro Saito & Naomi Kitamoto & Hatsune Makino-Itou & Rieko Ajima & Risako Nakano & Hirofumi Nakaoka & Kosuke Fukui & Kanae Gamo & Yusuke Tominari & Haruki Takeuchi & Yumiko Saga, 2020. "The auxin-inducible degron 2 technology provides sharp degradation control in yeast, mammalian cells, and mice," Nature Communications, Nature, vol. 11(1), pages 1-13, December.
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