The Heterochromatin protein 1 is a regulator in RNA splicing precision deficient in ulcerative colitis
Author
Abstract
Suggested Citation
DOI: 10.1038/s41467-022-34556-3
Download full text from publisher
References listed on IDEAS
- Yael Haberman & Rebekah Karns & Phillip J. Dexheimer & Melanie Schirmer & Judith Somekh & Ingrid Jurickova & Tzipi Braun & Elizabeth Novak & Laura Bauman & Margaret H. Collins & Angela Mo & Michael J., 2019. "Ulcerative colitis mucosal transcriptomes reveal mitochondriopathy and personalized mechanisms underlying disease severity and treatment response," Nature Communications, Nature, vol. 10(1), pages 1-13, December.
- Adam L. Haber & Moshe Biton & Noga Rogel & Rebecca H. Herbst & Karthik Shekhar & Christopher Smillie & Grace Burgin & Toni M. Delorey & Michael R. Howitt & Yarden Katz & Itay Tirosh & Semir Beyaz & Da, 2017. "A single-cell survey of the small intestinal epithelium," Nature, Nature, vol. 551(7680), pages 333-339, November.
- Tomasz Chelmicki & Emeline Roger & Aurélie Teissandier & Mathilde Dura & Lorraine Bonneville & Sofia Rucli & François Dossin & Camille Fouassier & Sonia Lameiras & Deborah Bourc’his, 2021. "m6A RNA methylation regulates the fate of endogenous retroviruses," Nature, Nature, vol. 591(7849), pages 312-316, March.
- Guang-Hui Liu & Basam Z. Barkho & Sergio Ruiz & Dinh Diep & Jing Qu & Sheng-Lian Yang & Athanasia D. Panopoulos & Keiichiro Suzuki & Leo Kurian & Christopher Walsh & James Thompson & Stephanie Boue & , 2011. "Recapitulation of premature ageing with iPSCs from Hutchinson–Gilford progeria syndrome," Nature, Nature, vol. 472(7342), pages 221-225, April.
- Irmgard U. Haussmann & Zsuzsanna Bodi & Eugenio Sanchez-Moran & Nigel P. Mongan & Nathan Archer & Rupert G. Fray & Matthias Soller, 2016. "m6A potentiates Sxl alternative pre-mRNA splicing for robust Drosophila sex determination," Nature, Nature, vol. 540(7632), pages 301-304, December.
- Kenichi Yoshida & Masashi Sanada & Yuichi Shiraishi & Daniel Nowak & Yasunobu Nagata & Ryo Yamamoto & Yusuke Sato & Aiko Sato-Otsubo & Ayana Kon & Masao Nagasaki & George Chalkidis & Yutaka Suzuki & M, 2011. "Frequent pathway mutations of splicing machinery in myelodysplasia," Nature, Nature, vol. 478(7367), pages 64-69, October.
- Maria Eriksson & W. Ted Brown & Leslie B. Gordon & Michael W. Glynn & Joel Singer & Laura Scott & Michael R. Erdos & Christiane M. Robbins & Tracy Y. Moses & Peter Berglund & Amalia Dutra & Evgenia Pa, 2003. "Recurrent de novo point mutations in lamin A cause Hutchinson–Gilford progeria syndrome," Nature, Nature, vol. 423(6937), pages 293-298, May.
- Ruicong Wang & Hongda Li & Jianfeng Wu & Zhi-Yu Cai & Baizhou Li & Hengxiao Ni & Xingfeng Qiu & Hui Chen & Wei Liu & Zhang-Hua Yang & Min Liu & Jin Hu & Yaoji Liang & Ping Lan & Jiahuai Han & Wei Mo, 2020. "Gut stem cell necroptosis by genome instability triggers bowel inflammation," Nature, Nature, vol. 580(7803), pages 386-390, April.
- Soren J. Nielsen & Robert Schneider & Uta-Maria Bauer & Andrew J. Bannister & Ashby Morrison & Donal O'Carroll & Ron Firestein & Michael Cleary & Thomas Jenuwein & Rafael E. Herrera & Tony Kouzarides, 2001. "Rb targets histone H3 methylation and HP1 to promoters," Nature, Nature, vol. 412(6846), pages 561-565, August.
- S. Sanulli & M. J. Trnka & V. Dharmarajan & R. W. Tibble & B. D. Pascal & A. L. Burlingame & P. R. Griffin & J. D. Gross & G. J. Narlikar, 2019. "HP1 reshapes nucleosome core to promote phase separation of heterochromatin," Nature, Nature, vol. 575(7782), pages 390-394, November.
Citations
Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
Cited by:
- Raquel Francés & Yuanji Fu & Christophe Desterke & Jorge Mata-Garrido, 2024. "Inflammatory Bowel Diseases in Spain: A View from the Present to the Future," J, MDPI, vol. 7(4), pages 1-13, November.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Xingxing Ren & Qiuyuan Liu & Peirong Zhou & Tingyue Zhou & Decai Wang & Qiao Mei & Richard A. Flavell & Zhanju Liu & Mingsong Li & Wen Pan & Shu Zhu, 2024. "DHX9 maintains epithelial homeostasis by restraining R-loop-mediated genomic instability in intestinal stem cells," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
- Patricia R. Pitrez & Luis M. Monteiro & Oliver Borgogno & Xavier Nissan & Jerome Mertens & Lino Ferreira, 2024. "Cellular reprogramming as a tool to model human aging in a dish," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
- Kunkun Zhang & Shaoxuan Chen & Qihua Yang & Shuanghui Guo & Qiang Chen & Zhixiong Liu & Li Li & Mengyun Jiang & Hongda Li & Jin Hu & Xu Pan & Wenbo Deng & Naian Xiao & Bo Wang & Zhan-xiang Wang & Lian, 2022. "The Oligodendrocyte Transcription Factor 2 OLIG2 regulates transcriptional repression during myelinogenesis in rodents," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
- Isabel Mulet & Carmen Grueso-Cortina & Mireia Cortés-Cano & Daniela Gerovska & Guangming Wu & Stefania Alexandra Iakab & Daniel Jimenez-Blasco & Andrea Curtabbi & Pablo Hernansanz-Agustín & Harmony Ke, 2024. "TET3 regulates terminal cell differentiation at the metabolic level," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
- Zhiyuan Luo & Jiacheng Zhang & Jingyi Fei & Shengdong Ke, 2022. "Deep learning modeling m6A deposition reveals the importance of downstream cis-element sequences," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
- Baolei Yuan & Xuan Zhou & Keiichiro Suzuki & Gerardo Ramos-Mandujano & Mengge Wang & Muhammad Tehseen & Lorena V. Cortés-Medina & James J. Moresco & Sarah Dunn & Reyna Hernandez-Benitez & Tomoaki Hish, 2022. "Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing," Nature Communications, Nature, vol. 13(1), pages 1-20, December.
- Ting Peng & Yingping Hou & Haowei Meng & Yong Cao & Xiaotian Wang & Lumeng Jia & Qing Chen & Yang Zheng & Yujie Sun & Hebing Chen & Tingting Li & Cheng Li, 2023. "Mapping nucleolus-associated chromatin interactions using nucleolus Hi-C reveals pattern of heterochromatin interactions," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
- Alberto Díez-Sánchez & Håvard T. Lindholm & Pia M. Vornewald & Jenny Ostrop & Rouan Yao & Andrew B. Single & Anne Marstad & Naveen Parmar & Tovah N. Shaw & Mara Martín-Alonso & Menno J. Oudhoff, 2024. "LSD1 drives intestinal epithelial maturation and controls small intestinal immune cell composition independent of microbiota in a murine model," Nature Communications, Nature, vol. 15(1), pages 1-20, December.
- Susanne Kessler & Bradly Burke & Geoffroy Andrieux & Jan Schinköthe & Lea Hamberger & Johannes Kacza & Shijun Zhan & Clara Reasoner & Taru S. Dutt & Maria Kaukab Osman & Marcela Henao-Tamayo & Julian , 2024. "Deciphering bat influenza H18N11 infection dynamics in male Jamaican fruit bats on a single-cell level," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
- Patricia González-Rodríguez & Daniel J. Klionsky & Bertrand Joseph, 2022. "Autophagy regulation by RNA alternative splicing and implications in human diseases," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
- Xiwen Xiong & Chenyan Yang & Wei-Qi He & Jiahui Yu & Yue Xin & Xinge Zhang & Rong Huang & Honghui Ma & Shaofang Xu & Zun Li & Jie Ma & Lin Xu & Qunyi Wang & Kaiqun Ren & Xiaoli S. Wu & Christopher R. , 2022. "Sirtuin 6 maintains epithelial STAT6 activity to support intestinal tuft cell development and type 2 immunity," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
- Sophia Groh & Anna Viktoria Milton & Lisa Katherina Marinelli & Cara V. Sickinger & Angela Russo & Heike Bollig & Gustavo Pereira de Almeida & Andreas Schmidt & Ignasi Forné & Axel Imhof & Gunnar Scho, 2021. "Morc3 silences endogenous retroviruses by enabling Daxx-mediated histone H3.3 incorporation," Nature Communications, Nature, vol. 12(1), pages 1-18, December.
- Wenqi Sun & Qianhua Dong & Xueqing Li & Jinxin Gao & Xianwen Ye & Chunyi Hu & Fei Li & Yong Chen, 2024. "The SUN-family protein Sad1 mediates heterochromatin spatial organization through interaction with histone H2A-H2B," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
- Xianle Shi & Yanjing Li & Hongwei Zhou & Xiukun Hou & Jihong Yang & Vikas Malik & Francesco Faiola & Junjun Ding & Xichen Bao & Miha Modic & Weiyu Zhang & Lingyi Chen & Syed Raza Mahmood & Effie Apost, 2024. "DDX18 coordinates nucleolus phase separation and nuclear organization to control the pluripotency of human embryonic stem cells," Nature Communications, Nature, vol. 15(1), pages 1-21, December.
- Sandor Spisak & David Chen & Pornlada Likasitwatanakul & Paul Doan & Zhixin Li & Pratyusha Bala & Laura Vizkeleti & Viktoria Tisza & Pushpamali Silva & Marios Giannakis & Brian Wolpin & Jun Qi & Nilay, 2024. "Identifying regulators of aberrant stem cell and differentiation activity in colorectal cancer using a dual endogenous reporter system," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
- Lucia Taraborrelli & Yasin Şenbabaoğlu & Lifen Wang & Junghyun Lim & Kerrigan Blake & Noelyn Kljavin & Sarah Gierke & Alexis Scherl & James Ziai & Erin McNamara & Mark Owyong & Shilpa Rao & Aslihan Ka, 2023. "Tumor-intrinsic expression of the autophagy gene Atg16l1 suppresses anti-tumor immunity in colorectal cancer," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
- Patricia Gerdes & Sue Mei Lim & Adam D. Ewing & Michael R. Larcombe & Dorothy Chan & Francisco J. Sanchez-Luque & Lucinda Walker & Alexander L. Carleton & Cini James & Anja S. Knaupp & Patricia E. Car, 2022. "Retrotransposon instability dominates the acquired mutation landscape of mouse induced pluripotent stem cells," Nature Communications, Nature, vol. 13(1), pages 1-18, December.
- Tianwei Yu, 2018. "A new dynamic correlation algorithm reveals novel functional aspects in single cell and bulk RNA-seq data," PLOS Computational Biology, Public Library of Science, vol. 14(8), pages 1-22, August.
- Greg Holmes & Ana S. Gonzalez-Reiche & Madrikha Saturne & Susan M. Motch Perrine & Xianxiao Zhou & Ana C. Borges & Bhavana Shewale & Joan T. Richtsmeier & Bin Zhang & Harm Bakel & Ethylin Wang Jabs, 2021. "Single-cell analysis identifies a key role for Hhip in murine coronal suture development," Nature Communications, Nature, vol. 12(1), pages 1-16, December.
- Mariela Cortés-López & Laura Schulz & Mihaela Enculescu & Claudia Paret & Bea Spiekermann & Mathieu Quesnel-Vallières & Manuel Torres-Diz & Sebastian Unic & Anke Busch & Anna Orekhova & Monika Kuban &, 2022. "High-throughput mutagenesis identifies mutations and RNA-binding proteins controlling CD19 splicing and CART-19 therapy resistance," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
Corrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-34556-3. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.