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Active learning of reactive Bayesian force fields applied to heterogeneous catalysis dynamics of H/Pt

Author

Listed:
  • Jonathan Vandermause

    (Harvard University
    Harvard University)

  • Yu Xie

    (Harvard University)

  • Jin Soo Lim

    (Harvard University)

  • Cameron J. Owen

    (Harvard University)

  • Boris Kozinsky

    (Harvard University
    Robert Bosch LLC, Research and Technology Center)

Abstract

Atomistic modeling of chemically reactive systems has so far relied on either expensive ab initio methods or bond-order force fields requiring arduous parametrization. Here, we describe a Bayesian active learning framework for autonomous “on-the-fly” training of fast and accurate reactive many-body force fields during molecular dynamics simulations. At each time-step, predictive uncertainties of a sparse Gaussian process are evaluated to automatically determine whether additional ab initio training data are needed. We introduce a general method for mapping trained kernel models onto equivalent polynomial models whose prediction cost is much lower and independent of the training set size. As a demonstration, we perform direct two-phase simulations of heterogeneous H2 turnover on the Pt(111) catalyst surface at chemical accuracy. The model trains itself in three days and performs at twice the speed of a ReaxFF model, while maintaining much higher fidelity to DFT and excellent agreement with experiment.

Suggested Citation

  • Jonathan Vandermause & Yu Xie & Jin Soo Lim & Cameron J. Owen & Boris Kozinsky, 2022. "Active learning of reactive Bayesian force fields applied to heterogeneous catalysis dynamics of H/Pt," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-32294-0
    DOI: 10.1038/s41467-022-32294-0
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    References listed on IDEAS

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    1. Jinzhe Zeng & Liqun Cao & Mingyuan Xu & Tong Zhu & John Z. H. Zhang, 2020. "Complex reaction processes in combustion unraveled by neural network-based molecular dynamics simulation," Nature Communications, Nature, vol. 11(1), pages 1-9, December.
    2. Volker L. Deringer & Noam Bernstein & Gábor Csányi & Chiheb Mahmoud & Michele Ceriotti & Mark Wilson & David A. Drabold & Stephen R. Elliott, 2021. "Origins of structural and electronic transitions in disordered silicon," Nature, Nature, vol. 589(7840), pages 59-64, January.
    3. Matthias Rupp & Matthias R Bauer & Rainer Wilcken & Andreas Lange & Michael Reutlinger & Frank M Boeckler & Gisbert Schneider, 2014. "Machine Learning Estimates of Natural Product Conformational Energies," PLOS Computational Biology, Public Library of Science, vol. 10(1), pages 1-8, January.
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    Cited by:

    1. Cameron J. Owen & Yu Xie & Anders Johansson & Lixin Sun & Boris Kozinsky, 2024. "Low-index mesoscopic surface reconstructions of Au surfaces using Bayesian force fields," Nature Communications, Nature, vol. 15(1), pages 1-13, December.

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