IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v13y2022i1d10.1038_s41467-022-29229-0.html
   My bibliography  Save this article

Brain-wide projection reconstruction of single functionally defined neurons

Author

Listed:
  • Meng Wang

    (Third Military Medical University
    Third Military Medical University
    Chongqing University)

  • Ke Liu

    (Third Military Medical University
    Third Military Medical University)

  • Junxia Pan

    (Third Military Medical University
    Third Military Medical University)

  • Jialin Li

    (Chongqing University)

  • Pei Sun

    (Third Military Medical University
    Third Military Medical University)

  • Yongsheng Zhang

    (Huazhong University of Science and Technology
    Huazhong University of Science and Technology)

  • Longhui Li

    (Chongqing University
    Guangxi University)

  • Wenyan Guo

    (Huazhong University of Science and Technology
    Huazhong University of Science and Technology)

  • Qianqian Xin

    (Third Military Medical University
    Third Military Medical University)

  • Zhikai Zhao

    (Third Military Medical University
    Third Military Medical University)

  • Yurong Liu

    (Huazhong University of Science and Technology
    Huazhong University of Science and Technology)

  • Zhenqiao Zhou

    (Chinese Academy of Sciences)

  • Jing Lyu

    (Chinese Academy of Sciences)

  • Ting Zheng

    (Huazhong University of Science and Technology
    Huazhong University of Science and Technology)

  • Yunyun Han

    (School of Basic Medicine and Tongji Medical College, Huazhong University of Science & Technology)

  • Chunqing Zhang

    (Third Military Medical University
    Third Military Medical University)

  • Xiang Liao

    (Chongqing University)

  • Shaoqun Zeng

    (Huazhong University of Science and Technology
    Huazhong University of Science and Technology)

  • Hongbo Jia

    (Guangxi University
    Chinese Academy of Sciences
    Technical University Munich
    Leibniz Institute for Neurobiology)

  • Xiaowei Chen

    (Third Military Medical University
    Third Military Medical University
    Chinese Academy of Sciences
    Guangyang Bay Laboratory)

Abstract

Reconstructing axonal projections of single neurons at the whole-brain level is currently a converging goal of the neuroscience community that is fundamental for understanding the logic of information flow in the brain. Thousands of single neurons from different brain regions have recently been morphologically reconstructed, but the corresponding physiological functional features of these reconstructed neurons are unclear. By combining two-photon Ca2+ imaging with targeted single-cell plasmid electroporation, we reconstruct the brain-wide morphologies of single neurons that are defined by a sound-evoked response map in the auditory cortices (AUDs) of awake mice. Long-range interhemispheric projections can be reliably labelled via co-injection with an adeno-associated virus, which enables enhanced expression of indicator protein in the targeted neurons. Here we show that this method avoids the randomness and ambiguity of conventional methods of neuronal morphological reconstruction, offering an avenue for developing a precise one-to-one map of neuronal projection patterns and physiological functional features.

Suggested Citation

  • Meng Wang & Ke Liu & Junxia Pan & Jialin Li & Pei Sun & Yongsheng Zhang & Longhui Li & Wenyan Guo & Qianqian Xin & Zhikai Zhao & Yurong Liu & Zhenqiao Zhou & Jing Lyu & Ting Zheng & Yunyun Han & Chunq, 2022. "Brain-wide projection reconstruction of single functionally defined neurons," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-29229-0
    DOI: 10.1038/s41467-022-29229-0
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-022-29229-0
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-022-29229-0?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Xu Liu & Steve Ramirez & Petti T. Pang & Corey B. Puryear & Arvind Govindarajan & Karl Deisseroth & Susumu Tonegawa, 2012. "Optogenetic stimulation of a hippocampal engram activates fear memory recall," Nature, Nature, vol. 484(7394), pages 381-385, April.
    2. Yunyun Han & Justus M. Kebschull & Robert A. A. Campbell & Devon Cowan & Fabia Imhof & Anthony M. Zador & Thomas D. Mrsic-Flogel, 2018. "The logic of single-cell projections from visual cortex," Nature, Nature, vol. 556(7699), pages 51-56, April.
    3. Kenichi Ohki & Sooyoung Chung & Yeang H. Ch'ng & Prakash Kara & R. Clay Reid, 2005. "Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex," Nature, Nature, vol. 433(7026), pages 597-603, February.
    4. Steve Ramirez & Xu Liu & Christopher J. MacDonald & Anthony Moffa & Joanne Zhou & Roger L. Redondo & Susumu Tonegawa, 2015. "Activating positive memory engrams suppresses depression-like behaviour," Nature, Nature, vol. 522(7556), pages 335-339, June.
    5. Hui Gong & Dongli Xu & Jing Yuan & Xiangning Li & Congdi Guo & Jie Peng & Yuxin Li & Lindsay A. Schwarz & Anan Li & Bihe Hu & Benyi Xiong & Qingtao Sun & Yalun Zhang & Jiepeng Liu & Qiuyuan Zhong & To, 2016. "High-throughput dual-colour precision imaging for brain-wide connectome with cytoarchitectonic landmarks at the cellular level," Nature Communications, Nature, vol. 7(1), pages 1-12, November.
    6. Lu Li & Benjamin Ouellette & William A. Stoy & Emma J. Garren & Tanya L. Daigle & Craig R. Forest & Christof Koch & Hongkui Zeng, 2017. "A robot for high yield electrophysiology and morphology of single neurons in vivo," Nature Communications, Nature, vol. 8(1), pages 1-10, August.
    7. Torkel Hafting & Marianne Fyhn & Sturla Molden & May-Britt Moser & Edvard I. Moser, 2005. "Microstructure of a spatial map in the entorhinal cortex," Nature, Nature, vol. 436(7052), pages 801-806, August.
    8. Meng Wang & Xiang Liao & Ruijie Li & Shanshan Liang & Ran Ding & Jingcheng Li & Jianxiong Zhang & Wenjing He & Ke Liu & Junxia Pan & Zhikai Zhao & Tong Li & Kuan Zhang & Xingyi Li & Jing Lyu & Zhenqia, 2020. "Single-neuron representation of learned complex sounds in the auditory cortex," Nature Communications, Nature, vol. 11(1), pages 1-14, December.
    9. Seung Wook Oh & Julie A. Harris & Lydia Ng & Brent Winslow & Nicholas Cain & Stefan Mihalas & Quanxin Wang & Chris Lau & Leonard Kuan & Alex M. Henry & Marty T. Mortrud & Benjamin Ouellette & Thuc Ngh, 2014. "A mesoscale connectome of the mouse brain," Nature, Nature, vol. 508(7495), pages 207-214, April.
    10. Xiaowei Chen & Ulrich Leischner & Nathalie L. Rochefort & Israel Nelken & Arthur Konnerth, 2011. "Functional mapping of single spines in cortical neurons in vivo," Nature, Nature, vol. 475(7357), pages 501-505, July.
    11. Takashi Yoshida & Kenichi Ohki, 2020. "Natural images are reliably represented by sparse and variable populations of neurons in visual cortex," Nature Communications, Nature, vol. 11(1), pages 1-19, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Jun Liu & Arron F. Hall & Dong V. Wang, 2024. "Emerging many-to-one weighted mapping in hippocampus-amygdala network underlies memory formation," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
    2. Marcus N. Leiwe & Satoshi Fujimoto & Toshikazu Baba & Daichi Moriyasu & Biswanath Saha & Richi Sakaguchi & Shigenori Inagaki & Takeshi Imai, 2024. "Automated neuronal reconstruction with super-multicolour Tetbow labelling and threshold-based clustering of colour hues," Nature Communications, Nature, vol. 15(1), pages 1-19, December.
    3. Ruijie Li & Junjie Huang & Longhui Li & Zhikai Zhao & Susu Liang & Shanshan Liang & Meng Wang & Xiang Liao & Jing Lyu & Zhenqiao Zhou & Sibo Wang & Wenjun Jin & Haiyang Chen & Damaris Holder & Hongban, 2023. "Holistic bursting cells store long-term memory in auditory cortex," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
    4. Dheeraj S. Roy & Young-Gyun Park & Minyoung E. Kim & Ying Zhang & Sachie K. Ogawa & Nicholas DiNapoli & Xinyi Gu & Jae H. Cho & Heejin Choi & Lee Kamentsky & Jared Martin & Olivia Mosto & Tomomi Aida , 2022. "Brain-wide mapping reveals that engrams for a single memory are distributed across multiple brain regions," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
    5. Wenhan Luo & Di Yun & Yi Hu & Miaomiao Tian & Jiajun Yang & Yifan Xu & Yong Tang & Yang Zhan & Hong Xie & Ji-Song Guan, 2022. "Acquiring new memories in neocortex of hippocampal-lesioned mice," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
    6. Joseph I. Terranova & Jun Yokose & Hisayuki Osanai & Sachie K. Ogawa & Takashi Kitamura, 2023. "Systems consolidation induces multiple memory engrams for a flexible recall strategy in observational fear memory in male mice," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
    7. Li Yuan & Xiaoyin Chen & Huiqing Zhan & Gilbert L. Henry & Anthony M. Zador, 2024. "Massive multiplexing of spatially resolved single neuron projections with axonal BARseq," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    8. Yanjie Wang & Zhaonan Chen & Guofen Ma & Lizhao Wang & Yanmei Liu & Meiling Qin & Xiang Fei & Yifan Wu & Min Xu & Siyu Zhang, 2023. "A frontal transcallosal inhibition loop mediates interhemispheric balance in visuospatial processing," Nature Communications, Nature, vol. 14(1), pages 1-21, December.
    9. Guihua Xiao & Yeyi Cai & Yuanlong Zhang & Jingyu Xie & Lifan Wu & Hao Xie & Jiamin Wu & Qionghai Dai, 2024. "Mesoscale neuronal granular trial variability in vivo illustrated by nonlinear recurrent network in silico," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    10. Stephanie L. Grella & Amanda H. Fortin & Evan Ruesch & John H. Bladon & Leanna F. Reynolds & Abby Gross & Monika Shpokayte & Christine Cincotta & Yosif Zaki & Steve Ramirez, 2022. "Reactivating hippocampal-mediated memories during reconsolidation to disrupt fear," Nature Communications, Nature, vol. 13(1), pages 1-19, December.
    11. Luis M. Franco & Michael J. Goard, 2024. "Differential stability of task variable representations in retrosplenial cortex," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    12. Isabella C. Wagner & Luise P. Graichen & Boryana Todorova & Andre Lüttig & David B. Omer & Matthias Stangl & Claus Lamm, 2023. "Entorhinal grid-like codes and time-locked network dynamics track others navigating through space," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
    13. Sorinel A Oprisan & Xandre Clementsmith & Tamas Tompa & Antonieta Lavin, 2019. "Dopamine receptor antagonists effects on low-dimensional attractors of local field potentials in optogenetic mice," PLOS ONE, Public Library of Science, vol. 14(10), pages 1-39, October.
    14. Jianian Lin & Zongyue Cheng & Guang Yang & Meng Cui, 2022. "Optical gearbox enabled versatile multiscale high-throughput multiphoton functional imaging," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
    15. Matteo Farinella & Daniel T Ruedt & Padraig Gleeson & Frederic Lanore & R Angus Silver, 2014. "Glutamate-Bound NMDARs Arising from In Vivo-like Network Activity Extend Spatio-temporal Integration in a L5 Cortical Pyramidal Cell Model," PLOS Computational Biology, Public Library of Science, vol. 10(4), pages 1-21, April.
    16. Taylor J. Malone & Nai-Wen Tien & Yan Ma & Lian Cui & Shangru Lyu & Garret Wang & Duc Nguyen & Kai Zhang & Maxym V. Myroshnychenko & Jean Tyan & Joshua A. Gordon & David A. Kupferschmidt & Yi Gu, 2024. "A consistent map in the medial entorhinal cortex supports spatial memory," Nature Communications, Nature, vol. 15(1), pages 1-22, December.
    17. Kyerl Park & Yoonsoo Yeo & Kisung Shin & Jeehyun Kwag, 2024. "Egocentric neural representation of geometric vertex in the retrosplenial cortex," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    18. Noga Mosheiff & Haggai Agmon & Avraham Moriel & Yoram Burak, 2017. "An efficient coding theory for a dynamic trajectory predicts non-uniform allocation of entorhinal grid cells to modules," PLOS Computational Biology, Public Library of Science, vol. 13(6), pages 1-19, June.
    19. Wenqi Chen & Jiejunyi Liang & Qiyun Wu & Yunyun Han, 2024. "Anterior cingulate cortex provides the neural substrates for feedback-driven iteration of decision and value representation," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    20. Wen-Hao Zhang & Si Wu & Krešimir Josić & Brent Doiron, 2023. "Sampling-based Bayesian inference in recurrent circuits of stochastic spiking neurons," Nature Communications, Nature, vol. 14(1), pages 1-19, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-29229-0. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.