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Mapping Environmental Suitability of Scrub Typhus in Nepal Using MaxEnt and Random Forest Models

Author

Listed:
  • Bipin Kumar Acharya

    (Department of Epidemiology, School of Public Health, Sun Yat-Sen University, Guangzhou 510080, China)

  • Wei Chen

    (Institute of Surface-Earth System Science, Tianjin University, Tianjin 300072, China)

  • Zengliang Ruan

    (Department of Epidemiology, School of Public Health, Sun Yat-Sen University, Guangzhou 510080, China)

  • Gobind Prasad Pant

    (Department of Public Health, Manmohan Memorial Institute of Health Sciences, Kathmandu 44613, Nepal
    Center for Environmental and Occupational Health in Nepal (CEOHN), Karnali Academy of Health Sciences (KAHS), Mahalaxmisthan, Lalitpur 44511, Nepal)

  • Yin Yang

    (Department of Epidemiology, School of Public Health, Sun Yat-Sen University, Guangzhou 510080, China)

  • Lalan Prasad Shah

    (Department of Health Services, Teku, Kathmandu 44600, Nepal)

  • Chunxiang Cao

    (State Key Laboratory of Remote Sensing Science, Institute of Remote Sensing and Digital Earth, Chinese Academy of Sciences, Beijing 100094, China)

  • Zhiwei Xu

    (School of Public Health, Faculty of Medicine, the University of Queensland, Herston, QLD 4006, Australia)

  • Meghnath Dhimal

    (Nepal Health Research Council, Kathmandu 44600, Nepal)

  • Hualiang Lin

    (Department of Epidemiology, School of Public Health, Sun Yat-Sen University, Guangzhou 510080, China)

Abstract

Being a globally emerging mite-borne zoonotic disease, scrub typhus is a serious public health concern in Nepal. Mapping environmental suitability and quantifying the human population under risk of the disease is important for prevention and control efforts. In this study, we model and map the environmental suitability of scrub typhus using the ecological niche approach, machine learning modeling techniques, and report locations of scrub typhus along with several climatic, topographic, Normalized Difference Vegetation Index (NDVI), and proximity explanatory variables and estimated population under the risk of disease at a national level. Both MaxEnt and RF technique results reveal robust predictive power with test The area under curve (AUC) and true skill statistics (TSS) of above 0.8 and 0.6, respectively. Spatial prediction reveals that environmentally suitable areas of scrub typhus are widely distributed across the country particularly in the low-land Tarai and less elevated river valleys. We found that areas close to agricultural land with gentle slopes have higher suitability of scrub typhus occurrence. Despite several speculations on the association between scrub typhus and proximity to earthquake epicenters, we did not find a significant role of proximity to earthquake epicenters in the distribution of scrub typhus in Nepal. About 43% of the population living in highly suitable areas for scrub typhus are at higher risk of infection, followed by 29% living in suitable areas of moderate-risk, and about 22% living in moderately suitable areas of lower risk. These findings could be useful in selecting priority areas for surveillance and control strategies effectively.

Suggested Citation

  • Bipin Kumar Acharya & Wei Chen & Zengliang Ruan & Gobind Prasad Pant & Yin Yang & Lalan Prasad Shah & Chunxiang Cao & Zhiwei Xu & Meghnath Dhimal & Hualiang Lin, 2019. "Mapping Environmental Suitability of Scrub Typhus in Nepal Using MaxEnt and Random Forest Models," IJERPH, MDPI, vol. 16(23), pages 1-14, December.
  • Handle: RePEc:gam:jijerp:v:16:y:2019:i:23:p:4845-:d:293194
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    References listed on IDEAS

    as
    1. Kyung-Duk Min & Ju-Yeun Lee & Yeonghwa So & Sung-il Cho, 2019. "Deforestation Increases the Risk of Scrub Typhus in Korea," IJERPH, MDPI, vol. 16(9), pages 1-10, April.
    2. Bipin Kumar Acharya & Chunxiang Cao & Min Xu & Laxman Khanal & Shahid Naeem & Shreejana Pandit, 2018. "Present and Future of Dengue Fever in Nepal: Mapping Climatic Suitability by Ecological Niche Model," IJERPH, MDPI, vol. 15(2), pages 1-15, January.
    3. Samir Bhatt & Peter W. Gething & Oliver J. Brady & Jane P. Messina & Andrew W. Farlow & Catherine L. Moyes & John M. Drake & John S. Brownstein & Anne G. Hoen & Osman Sankoh & Monica F. Myers & Dylan , 2013. "The global distribution and burden of dengue," Nature, Nature, vol. 496(7446), pages 504-507, April.
    Full references (including those not matched with items on IDEAS)

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