IDEAS home Printed from https://ideas.repec.org/a/gam/jagris/v13y2023i3p642-d1091697.html
   My bibliography  Save this article

Molecular Markers and Their Applications in Marker-Assisted Selection (MAS) in Bread Wheat ( Triticum aestivum L.)

Author

Listed:
  • Liqiang Song

    (State Key Laboratory of North China Crop Improvement and Regulation, College of Agronomy, Hebei Agricultural University, Baoding 071000, China)

  • Ruihui Wang

    (State Key Laboratory of North China Crop Improvement and Regulation, College of Agronomy, Hebei Agricultural University, Baoding 071000, China)

  • Xueju Yang

    (State Key Laboratory of North China Crop Improvement and Regulation, College of Agronomy, Hebei Agricultural University, Baoding 071000, China)

  • Aimin Zhang

    (State Key Laboratory of North China Crop Improvement and Regulation, College of Agronomy, Hebei Agricultural University, Baoding 071000, China)

  • Dongcheng Liu

    (State Key Laboratory of North China Crop Improvement and Regulation, College of Agronomy, Hebei Agricultural University, Baoding 071000, China)

Abstract

As one of the essential cereal crops, wheat provides 20% of the calories and proteins consumed by humans. Due to population expansion, dietary shift and climate change, it is challenging for wheat breeders to develop new varieties for meeting wheat production requirements. Marker-assisted selection (MAS) has distinct advantages over conventional selection in plant breeding, such as being time-saving, cost-effective and goal-oriented. This review makes attempts to give a description of different molecular markers: sequence tagged site (STS), simple sequence repeat (SSR), genotyping by sequencing (GBS), single nucleotide polymorphism (SNP) arrays, exome capture, Kompetitive Allele Specific PCR (KASP), cleaved amplified polymorphic sequence (CAPS), semi-thermal asymmetric reverse PCR (STARP) and genotyping by target sequencing (GBTS). We also summarize some quantitative trait loci (QTL)/genes as well as their linked markers, which are potentially useful in MAS. This paper provides updated information on some markers linked to critical traits and their potential applications in wheat breeding programs.

Suggested Citation

  • Liqiang Song & Ruihui Wang & Xueju Yang & Aimin Zhang & Dongcheng Liu, 2023. "Molecular Markers and Their Applications in Marker-Assisted Selection (MAS) in Bread Wheat ( Triticum aestivum L.)," Agriculture, MDPI, vol. 13(3), pages 1-18, March.
    • Handle: RePEc:gam:jagris:v:13:y:2023:i:3:p:642-:d:1091697
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/2077-0472/13/3/642/pdf
    Download Restriction: no
    File URL: https://www.mdpi.com/2077-0472/13/3/642/
    Download Restriction: no
    ---><---

    References listed on IDEAS

    as
    1. Sean Walkowiak & Liangliang Gao & Cecile Monat & Georg Haberer & Mulualem T. Kassa & Jemima Brinton & Ricardo H. Ramirez-Gonzalez & Markus C. Kolodziej & Emily Delorean & Dinushika Thambugala & Valent, 2020. "Multiple wheat genomes reveal global variation in modern breeding," Nature, Nature, vol. 588(7837), pages 277-283, December.
    2. Chuxuan Yao & Cuimian Zhang & Caili Bi & Shuo Zhou & Fushuang Dong & Yongwei Liu & Fan Yang & Bo Jiao & He Zhao & Mengyu Lyu & Haibo Wang & Jianfang Chai, 2022. "Establishment and Application of Multiplex PCR Systems Based on Molecular Markers for HMW-GSs in Wheat," Agriculture, MDPI, vol. 12(4), pages 1-9, April.
    3. Jinrong Peng & Donald E. Richards & Nigel M. Hartley & George P. Murphy & Katrien M. Devos & John E. Flintham & James Beales & Leslie J. Fish & Anthony J. Worland & Fatima Pelica & Duraialagaraja Sudh, 1999. "‘Green revolution’ genes encode mutant gibberellin response modulators," Nature, Nature, vol. 400(6741), pages 256-261, July.
    4. Hong-Qing Ling & Bin Ma & Xiaoli Shi & Hui Liu & Lingli Dong & Hua Sun & Yinghao Cao & Qiang Gao & Shusong Zheng & Ye Li & Ying Yu & Huilong Du & Ming Qi & Yan Li & Hongwei Lu & Hua Yu & Yan Cui & Nin, 2018. "Genome sequence of the progenitor of wheat A subgenome Triticum urartu," Nature, Nature, vol. 557(7705), pages 424-428, May.
    5. Jizeng Jia & Shancen Zhao & Xiuying Kong & Yingrui Li & Guangyao Zhao & Weiming He & Rudi Appels & Matthias Pfeifer & Yong Tao & Xueyong Zhang & Ruilian Jing & Chi Zhang & Youzhi Ma & Lifeng Gao & Chu, 2013. "Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation," Nature, Nature, vol. 496(7443), pages 91-95, April.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Muhammad Ahtasham Mushtaq & Hafiz Ghulam Muhu-Din Ahmed & Yawen Zeng, 2024. "Applications of Artificial Intelligence in Wheat Breeding for Sustainable Food Security," Sustainability, MDPI, vol. 16(13), pages 1-24, July.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Huanhuan Li & Wenqiang Men & Chao Ma & Qianwen Liu & Zhenjie Dong & Xiubin Tian & Chaoli Wang & Cheng Liu & Harsimardeep S. Gill & Pengtao Ma & Zhibin Zhang & Bao Liu & Yue Zhao & Sunish K. Sehgal & W, 2024. "Wheat powdery mildew resistance gene Pm13 encodes a mixed lineage kinase domain-like protein," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
    2. Habteab Goitom Gebremedhin & Yahui Li & Jinghuang Hu & Dan Qiu & Qiuhong Wu & Hongjun Zhang & Li Yang & Yang Zhou & Yijun Zhou & Zhiyong Liu & Peng Zhang & Hongjie Li, 2022. "Development of KASP and SSR Markers for PmQ , a Recessive Gene Conferring Powdery Mildew Resistance in Wheat Landrace Qingxinmai," Agriculture, MDPI, vol. 12(9), pages 1-10, August.
    3. Wenlong Yang & Ameer Ahmed Mirbahar & Muhammad Shoaib & Xueyuan Lou & Linhe Sun & Jiazhu Sun & Kehui Zhan & Aimin Zhang, 2022. "The Carotenoid Cleavage Dioxygenase Gene CCD7-B , at Large, Is Associated with Tillering in Common Wheat," Agriculture, MDPI, vol. 12(2), pages 1-14, February.
    4. Dongya Wu & Enhui Shen & Bowen Jiang & Yu Feng & Wei Tang & Sangting Lao & Lei Jia & Han-Yang Lin & Lingjuan Xie & Xifang Weng & Chenfeng Dong & Qinghong Qian & Feng Lin & Haiming Xu & Huabing Lu & Lu, 2022. "Genomic insights into the evolution of Echinochloa species as weed and orphan crop," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
    5. Miaomiao Li & Huaizhi Zhang & Huixin Xiao & Keyu Zhu & Wenqi Shi & Dong Zhang & Yong Wang & Lijun Yang & Qiuhong Wu & Jingzhong Xie & Yongxing Chen & Dan Qiu & Guanghao Guo & Ping Lu & Beibei Li & Lei, 2024. "A membrane associated tandem kinase from wild emmer wheat confers broad-spectrum resistance to powdery mildew," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    6. Taikui Zhang & Weichen Huang & Lin Zhang & De-Zhu Li & Ji Qi & Hong Ma, 2024. "Phylogenomic profiles of whole-genome duplications in Poaceae and landscape of differential duplicate retention and losses among major Poaceae lineages," Nature Communications, Nature, vol. 15(1), pages 1-27, December.
    7. Heiner Kuhl & Kang Du & Manfred Schartl & Lukáš Kalous & Matthias Stöck & Dunja K. Lamatsch, 2022. "Equilibrated evolution of the mixed auto-/allopolyploid haplotype-resolved genome of the invasive hexaploid Prussian carp," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
    8. Shichen Li & Zhihui Sun & Qing Sang & Chao Qin & Lingping Kong & Xin Huang & Huan Liu & Tong Su & Haiyang Li & Milan He & Chao Fang & Lingshuang Wang & Shuangrong Liu & Bin Liu & Baohui Liu & Xiangdon, 2023. "Soybean reduced internode 1 determines internode length and improves grain yield at dense planting," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    9. Zihao Wang & Wenxi Wang & Xiaoming Xie & Yongfa Wang & Zhengzhao Yang & Huiru Peng & Mingming Xin & Yingyin Yao & Zhaorong Hu & Jie Liu & Zhenqi Su & Chaojie Xie & Baoyun Li & Zhongfu Ni & Qixin Sun &, 2022. "Dispersed emergence and protracted domestication of polyploid wheat uncovered by mosaic ancestral haploblock inference," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    10. Eva Johansson & Faraz Muneer & Thomas Prade, 2023. "Plant Breeding to Mitigate Climate Change—Present Status and Opportunities with an Assessment of Winter Wheat Cultivation in Northern Europe as an Example," Sustainability, MDPI, vol. 15(16), pages 1-14, August.
    11. Fei He & Wei Wang & William B. Rutter & Katherine W. Jordan & Jie Ren & Ellie Taagen & Noah DeWitt & Deepmala Sehgal & Sivakumar Sukumaran & Susanne Dreisigacker & Matthew Reynolds & Jyotirmoy Halder , 2022. "Genomic variants affecting homoeologous gene expression dosage contribute to agronomic trait variation in allopolyploid wheat," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    12. Hewan Degu & Tatsuhito Fujimura, 2010. "Mapping QTLs Related to Plant Height and Root Development of Eragrostis tef under Drought," Journal of Agricultural Science, Canadian Center of Science and Education, vol. 2(2), pages 1-62, May.
    13. Jianping Zhang & Jayaveeramuthu Nirmala & Shisheng Chen & Matthias Jost & Burkhard Steuernagel & Mirka Karafiatova & Tim Hewitt & Hongna Li & Erena Edae & Keshav Sharma & Sami Hoxha & Dhara Bhatt & Re, 2023. "Single amino acid change alters specificity of the multi-allelic wheat stem rust resistance locus SR9," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
    14. Junhui Yuan & Sanjie Jiang & Jianbo Jian & Mingyu Liu & Zhen Yue & Jiabao Xu & Juan Li & Chunyan Xu & Lihong Lin & Yi Jing & Xiaoxiao Zhang & Haixin Chen & Linjuan Zhang & Tao Fu & Shuiyan Yu & Zhangy, 2022. "Genomic basis of the giga-chromosomes and giga-genome of tree peony Paeonia ostii," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
    15. Tuomas Hämälä & Christopher Moore & Laura Cowan & Matthew Carlile & David Gopaulchan & Marie K. Brandrud & Siri Birkeland & Matthew Loose & Filip Kolář & Marcus A. Koch & Levi Yant, 2024. "Impact of whole-genome duplications on structural variant evolution in Cochlearia," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
    16. Salma O. M. Osman & Abu Sefyan I. Saad & Shota Tadano & Yoshiki Takeda & Yuji Yamasaki & Izzat S. A. Tahir & Hisashi Tsujimoto & Kinya Akashi, 2022. "Probing Differential Metabolome Responses among Wheat Genotypes to Heat Stress Using Fourier Transform Infrared-Based Chemical Fingerprinting," Agriculture, MDPI, vol. 12(6), pages 1-14, May.
    17. Rajbir Yadav & S S Singh & Neelu Jain & Gyanendra Singh & KV Prabhu, 2010. "Wheat Production in India: Technologies to Face Future Challenges," Journal of Agricultural Science, Canadian Center of Science and Education, vol. 2(2), pages 164-164, May.
    18. Jiaqi Sun & Shiyu Huang & Qing Lu & Shuo Li & Shizhen Zhao & Xiaojian Zheng & Qian Zhou & Wenxiao Zhang & Jie Li & Lili Wang & Ke Zhang & Wenyu Zheng & Xianzhong Feng & Baohui Liu & Fanjiang Kong & Fe, 2023. "UV-B irradiation-activated E3 ligase GmILPA1 modulates gibberellin catabolism to increase plant height in soybean," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    19. Sylvain Aubry, 2023. "Genebanking plant genetic resources in the postgenomic era," Agriculture and Human Values, Springer;The Agriculture, Food, & Human Values Society (AFHVS), vol. 40(3), pages 961-971, September.
    20. Guotai Yu & Oadi Matny & Nicolas Champouret & Burkhard Steuernagel & Matthew J. Moscou & Inmaculada Hernández-Pinzón & Phon Green & Sadiye Hayta & Mark Smedley & Wendy Harwood & Ngonidzashe Kangara & , 2022. "Aegilops sharonensis genome-assisted identification of stem rust resistance gene Sr62," Nature Communications, Nature, vol. 13(1), pages 1-13, December.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jagris:v:13:y:2023:i:3:p:642-:d:1091697. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.